RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 DCAF12Q5T6F0 453 aa10.74□□□□□ -0.69
LAMA4-201ENST00000230538 CST9LP1Q5W188 147 aa10.74□□□□□ -0.69
LAMA4-201ENST00000230538 NPSR1Q6W5P4 371 aa10.74□□□□□ -0.69
LAMA4-201ENST00000230538 NKX3-1Q99801 234 aaPredicted RBP10.74□□□□□ -0.69
LAMA4-201ENST00000230538 OCSTAMPQ9BR26 566 aa10.74□□□□□ -0.69
LAMA4-201ENST00000230538 HCSTQ9UBK5 93 aa10.74□□□□□ -0.69
LAMA4-201ENST00000230538 RPH3ALQ9UNE2 315 aa10.74□□□□□ -0.69
LAMA4-201ENST00000230538 BCAT2O15382 392 aaPredicted RBP10.74□□□□□ -0.69
LAMA4-201ENST00000230538 AQP9O43315 295 aa10.74□□□□□ -0.69
LAMA4-201ENST00000230538 PRKACBP22694 351 aa10.74□□□□□ -0.69
LAMA4-201ENST00000230538 GABRB3P28472 473 aa10.74□□□□□ -0.69
LAMA4-201ENST00000230538 RPS25P62851 125 aaKnown RBP10.74□□□□□ -0.69
LAMA4-201ENST00000230538 MFGE8Q08431 387 aaPredicted RBP10.74□□□□□ -0.69
LAMA4-201ENST00000230538 IKZF1Q13422 519 aa10.74□□□□□ -0.69
LAMA4-201ENST00000230538 AARDQ4LEZ3 155 aa10.74□□□□□ -0.69
LAMA4-201ENST00000230538 OR56B1Q8NGI3 324 aa10.74□□□□□ -0.69
LAMA4-201ENST00000230538 MED17Q9NVC6 651 aa10.74□□□□□ -0.69
LAMA4-201ENST00000230538 DNMT3BQ9UBC3 853 aaKnown RBP10.74□□□□□ -0.69
LAMA4-201ENST00000230538 MOKQ9UQ07 419 aa10.74□□□□□ -0.69
LAMA4-201ENST00000230538 NUP98P52948 1817 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 TUSC2O75896 110 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 GM2AP17900 193 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 S100A7P31151 101 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 HNRNPFP52597 415 aaKnown RBP10.73□□□□□ -0.69
LAMA4-201ENST00000230538 FAM78AQ5JUQ0 283 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 MBOAT2Q6ZWT7 520 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 SLC35D2Q76EJ3 337 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 LRRC56Q8IYG6 542 aaPredicted RBP10.73□□□□□ -0.69
LAMA4-201ENST00000230538 OR11L1Q8NGX0 322 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 AMDHD1Q96NU7 426 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 SGPP1Q9BX95 441 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 GALNT9Q9HCQ5 603 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 NOSIPQ9Y314 301 aaKnown RBP10.73□□□□□ -0.69
LAMA4-201ENST00000230538 TOR1AO14656 332 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 ONECUT3O60422 494 aaPredicted RBP10.73□□□□□ -0.69
LAMA4-201ENST00000230538 SSR4P51571 173 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 PGBD5Q8N414 524 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 ZNF808Q8N4W9 903 aaPredicted RBP10.73□□□□□ -0.69
LAMA4-201ENST00000230538 FAM174AQ8TBP5 190 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 ZNF775Q96BV0 537 aaPredicted RBP10.73□□□□□ -0.69
LAMA4-201ENST00000230538 QRSL1Q9H0R6 528 aaKnown RBP10.73□□□□□ -0.69
LAMA4-201ENST00000230538 HIPK2Q9H2X6 1198 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 STEAP1Q9UHE8 339 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 C7orf72A4D263 438 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 ZNF705GA8MUZ8 300 aaPredicted RBP10.73□□□□□ -0.69
LAMA4-201ENST00000230538 MCRIP1C9JLW8 97 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 ALPLP05186 524 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 SNRPBP14678 240 aaKnown RBP10.73□□□□□ -0.69
LAMA4-201ENST00000230538 RBMS2Q15434 407 aaKnown RBP10.73□□□□□ -0.69
LAMA4-201ENST00000230538 MISPQ8IVT2 679 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 DUSP19Q8WTR2 217 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 SEMA4GQ9NTN9 838 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 C1orf123Q9NWV4 160 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 HSFX1Q9UBD0 423 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 SERINC4A6NH21 518 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 ACOD1A6NK06 481 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 OR7C1O76099 320 aaPredicted RBP10.73□□□□□ -0.69
LAMA4-201ENST00000230538 GJA4P35212 333 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 YPEL5P62699 121 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 CATR1Q13166 79 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 LSMEM2Q8N112 164 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 SLC38A5Q8WUX1 472 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 ALG12Q9BV10 488 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 SLC19A3Q9BZV2 496 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 LIN7BQ9HAP6 207 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 RANGRFQ9HD47 186 aaPredicted RBP10.73□□□□□ -0.69
LAMA4-201ENST00000230538 COPS3Q9UNS2 423 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 ARPC4-TTLL3A0A0A6YYG9 625 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 TMEM82A0PJX8 343 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 C17orf112F2Z3M2 114 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 K7EPK0 472 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 SIGLEC6O43699 453 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 ENSAO43768 121 aaKnown RBP10.73□□□□□ -0.69
LAMA4-201ENST00000230538 GPRIN2O60269 458 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 ADAM23O75077 832 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 FBXO24O75426 580 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 GIPRP48546 466 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 F2RL1P55085 397 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 ESCO2Q56NI9 601 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 PRAMEF20Q5VT98 475 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 SLX4IPQ5VYV7 408 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 TBPL2Q6SJ96 375 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 ESPNLQ6ZVH7 1005 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 AAED1Q7RTV5 226 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 TMPRSS7Q7RTY8 843 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 ADIPOR2Q86V24 386 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 FAM71E2Q8N5Q1 922 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 OR6C1Q96RD1 312 aa10.73□□□□□ -0.69
LAMA4-201ENST00000230538 TMEM72A0PK05 275 aa10.72□□□□□ -0.69
LAMA4-201ENST00000230538 H0YIV9 168 aa10.72□□□□□ -0.69
LAMA4-201ENST00000230538 PLA2G7Q13093 441 aa10.72□□□□□ -0.69
LAMA4-201ENST00000230538 PKDCCQ504Y2 493 aa10.72□□□□□ -0.69
LAMA4-201ENST00000230538 ANKRD9Q96BM1 317 aaPredicted RBP10.72□□□□□ -0.69
LAMA4-201ENST00000230538 RAB3CQ96E17 227 aa10.72□□□□□ -0.69
LAMA4-201ENST00000230538 UTP23Q9BRU9 249 aaKnown RBP10.72□□□□□ -0.69
LAMA4-201ENST00000230538 NOX4Q9NPH5 578 aa10.72□□□□□ -0.69
LAMA4-201ENST00000230538 NRIP3Q9NQ35 241 aa10.72□□□□□ -0.69
LAMA4-201ENST00000230538 TAS2R16Q9NYV7 291 aa10.72□□□□□ -0.69
LAMA4-201ENST00000230538 THBS3P49746 956 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms