RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 FAM166BA8MTA8 275 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 CDK1P06493 297 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 PRDX1Q06830 199 aaKnown RBP12.3□□□□□ -0.44
COL1A1-201ENST00000225964 TMEM64Q6YI46 380 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 SECTM1Q8WVN6 248 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 TPPP3Q9BW30 176 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 RASD1Q9Y272 281 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 A8MVM7 634 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 ADAM23O75077 832 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 TAS2R19P59542 299 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 OVCH1Q7RTY7 1134 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 ANKRD19PQ9H560 264 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 CITO14578 2027 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 GM2AP17900 193 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 GPX3P22352 226 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 MMP12P39900 470 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 TGM4P49221 684 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 BIRC8Q96P09 236 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 KCNJ16Q9NPI9 418 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 TMEM181Q9P2C4 612 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 ZNF281Q9Y2X9 895 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 A0A1W2PS29 197 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 H7C1Q1 480 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 HNF4GQ14541 408 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 C2orf76Q3KRA6 126 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 SYT13Q7L8C5 426 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 TFAP2CQ92754 450 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 SAMD10Q9BYL1 202 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 INPP5EQ9NRR6 644 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 VAPAQ9P0L0 249 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 PADI1Q9ULC6 663 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 SERINC4A6NH21 518 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 MSTNO14793 375 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 CT45A6P0DMU7 189 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 CT45A5P0DMU8 189 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 CT45A7P0DMV0 189 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 CT45A8P0DMV1 189 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 CT45A9P0DMV2 189 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 CA5AP35218 305 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 SNCAP37840 140 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 RGRP47804 291 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 MYBPHQ13203 477 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 CT45A2Q5DJT8 189 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 CT45A1Q5HYN5 189 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 PAPD4Q6PIY7 484 aaKnown RBP12.3□□□□□ -0.44
COL1A1-201ENST00000225964 DEFB123Q8N688 67 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 CT45A3Q8NHU0 189 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 ASB11Q8WXH4 323 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 RTP4Q96DX8 246 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 COQ10AQ96MF6 247 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 KATNB1Q9BVA0 655 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 CLMPQ9H6B4 373 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 B3GAT1Q9P2W7 334 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 ATP23Q9Y6H3 246 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 PRKRAO75569 313 aaKnown RBP12.3□□□□□ -0.44
COL1A1-201ENST00000225964 RAD52P43351 418 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 CYB561P49447 251 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 RAB11AP62491 216 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 GPR19Q15760 415 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 MED25Q71SY5 747 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 SLC15A4Q8N697 577 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 LCORQ96JN0 433 aaPredicted RBP12.3□□□□□ -0.44
COL1A1-201ENST00000225964 SELENOIQ9C0D9 397 aa12.3□□□□□ -0.44
COL1A1-201ENST00000225964 QRSL1Q9H0R6 528 aaKnown RBP12.3□□□□□ -0.44
COL1A1-201ENST00000225964 RGPD2P0DJD1 1756 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 BEX5Q5H9J7 111 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 FAM111BQ6SJ93 734 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 GAB3Q8WWW8 586 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 DEFB127Q9H1M4 99 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 NOX3Q9HBY0 568 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 SDR39U1Q9NRG7 319 aaPredicted RBP12.29□□□□□ -0.44
COL1A1-201ENST00000225964 SAGE1Q9NXZ1 904 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 KIF25Q9UIL4 384 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 GAPDHSO14556 408 aaPredicted RBP12.29□□□□□ -0.44
COL1A1-201ENST00000225964 METAP1DQ6UB28 335 aaPredicted RBP12.29□□□□□ -0.44
COL1A1-201ENST00000225964 MARCH3Q86UD3 253 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 GLB1L2Q8IW92 636 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 OR5D18Q8NGL1 313 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 OR2T35Q8NGX2 323 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 HLA-AP01891 365 aaKnown RBP12.29□□□□□ -0.44
COL1A1-201ENST00000225964 PRPH2P23942 346 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 RNF4P78317 190 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 HACD4Q5VWC8 232 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 LINC00346Q8IVM7 164 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 SLC43A2Q8N370 569 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 OR6T1Q8NGN1 323 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 GTF2H4Q92759 462 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 TSSK2Q96PF2 358 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 HDAC8Q9BY41 377 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 PGAP2Q9UHJ9 254 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 OR8G3PP0DMU2 310 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 EVI2BP34910 448 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 CLDN10P78369 228 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 C18orf63Q68DL7 685 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 KCNIP4Q6PIL6 250 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 BEST4Q8NFU0 473 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 TIMD4Q96H15 378 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 HRASLS5Q96KN8 279 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 WASH6PQ9NQA3 447 aa12.29□□□□□ -0.44
COL1A1-201ENST00000225964 TRAV36DV7A0A075B6V5 113 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms