RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.86□□□□□ -0.51
CTSA-213ENST00000606782 CDHR4A6H8M9 788 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 GSTA4O15217 222 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 TPST1O60507 370 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 SMPD2O60906 423 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 TMCC2O75069 709 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 BCAS1O75363 584 aaPredicted RBP11.86□□□□□ -0.51
CTSA-213ENST00000606782 PRKD3O94806 890 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 CSTAP01040 98 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 YES1P07947 543 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 PAX1P15863 534 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 TCN1P20061 433 aaPredicted RBP11.86□□□□□ -0.51
CTSA-213ENST00000606782 NR1H2P55055 460 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 PLAURQ03405 335 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 TRIM25Q14258 630 aaKnown RBP11.86□□□□□ -0.51
CTSA-213ENST00000606782 DUSP7Q16829 419 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 LIN52Q52LA3 116 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 TMEM201Q5SNT2 666 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 RNF220Q5VTB9 566 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 TFAP2EQ6VUC0 442 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 ZNF836Q6ZNA1 936 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 NUFIP2Q7Z417 695 aaKnown RBP11.86□□□□□ -0.51
CTSA-213ENST00000606782 ARMC8Q8IUR7 673 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 TUSC5Q8IXB3 177 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 FAM156AQ8NDB6 213 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 STEAP2Q8NFT2 490 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 OR52E4Q8NGH9 312 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 WDR60Q8WVS4 1066 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 CNOT9Q92600 299 aaKnown RBP11.86□□□□□ -0.51
CTSA-213ENST00000606782 TAMM41Q96BW9 452 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 CLPTM1LQ96KA5 538 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 USB1Q9BQ65 265 aaKnown RBP11.86□□□□□ -0.51
CTSA-213ENST00000606782 ACTR6Q9GZN1 396 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 LRMDAQ9H2I8 198 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 MMADHCQ9H3L0 296 aaPredicted RBP11.86□□□□□ -0.51
CTSA-213ENST00000606782 RLIMQ9NVW2 624 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 EGFL7Q9UHF1 273 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 PRDM4Q9UKN5 801 aa11.86□□□□□ -0.51
CTSA-213ENST00000606782 IFNA14P01570 189 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 C8BP07358 591 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 CD247P20963 164 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 ENPP1P22413 925 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 RNF144AP50876 292 aaPredicted RBP11.85□□□□□ -0.51
CTSA-213ENST00000606782 SESN3P58005 492 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 SELENOWP63302 87 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 MS4A2Q01362 244 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 BNIP2Q12982 314 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 P2RY6Q15077 328 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 GLIPR1L2Q4G1C9 344 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 SFRP5Q5T4F7 317 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 MRPL2Q5T653 305 aaKnown RBP11.85□□□□□ -0.51
CTSA-213ENST00000606782 ZNF614Q8N883 585 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 GPR32P1Q8NGA4 272 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 RASSF5Q8WWW0 418 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 TMEM234Q8WY98 164 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 SLC35B4Q969S0 331 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 CCL19Q99731 98 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 GSX2Q9BZM3 304 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 PCDHAC1Q9H158 963 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 ARMC7Q9H6L4 198 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 UBTD1Q9HAC8 227 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 EXOSC3Q9NQT5 275 aaKnown RBP11.85□□□□□ -0.51
CTSA-213ENST00000606782 ACER3Q9NUN7 267 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 ACTR3BQ9P1U1 418 aa11.85□□□□□ -0.51
CTSA-213ENST00000606782 FN1P02751 2386 aaKnown RBP11.84□□□□□ -0.51
CTSA-213ENST00000606782 ZNF724A8MTY0 619 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 ZNF814B7Z6K7 855 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 ACOT8O14734 319 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 CYTIPO60759 359 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 LGI1O95970 557 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 INHBBP09529 407 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 NCK1P16333 377 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 PGCP20142 388 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 SLC7A1P30825 629 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 ACAA2P42765 397 aaKnown RBP11.84□□□□□ -0.51
CTSA-213ENST00000606782 TRAP1Q12931 704 aaKnown RBP11.84□□□□□ -0.51
CTSA-213ENST00000606782 CYBRD1Q53TN4 286 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 Q5PR19 223 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 ADAM5Q6NVV9 412 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 C3orf33Q6P1S2 294 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 ZNF704Q6ZNC4 412 aaPredicted RBP11.84□□□□□ -0.51
CTSA-213ENST00000606782 TMPPEQ6ZT21 453 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 PLEKHM3Q6ZWE6 761 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 CBLL1Q75N03 491 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 P3H2Q8IVL5 708 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 SMYD1Q8NB12 490 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 SLC25A43Q8WUT9 341 aaPredicted RBP11.84□□□□□ -0.51
CTSA-213ENST00000606782 PSD2Q9BQI7 771 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 MUC13Q9H3R2 512 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 C12orf49Q9H741 205 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 EVA1AQ9H8M9 152 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 CACYBPQ9HB71 228 aaKnown RBP11.84□□□□□ -0.51
CTSA-213ENST00000606782 DCAF13Q9NV06 445 aaKnown RBP11.84□□□□□ -0.51
CTSA-213ENST00000606782 KLHL9Q9P2J3 617 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 MAGEL2Q9UJ55 1249 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 SNX13Q9Y5W8 968 aa11.84□□□□□ -0.51
CTSA-213ENST00000606782 A0A1W2PNR3 127 aa11.83□□□□□ -0.52
CTSA-213ENST00000606782 SMAD9O15198 467 aaKnown RBP11.83□□□□□ -0.52
CTSA-213ENST00000606782 ADAM11O75078 769 aa11.83□□□□□ -0.52
CTSA-213ENST00000606782 GMNNO75496 209 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms