RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SPOCK1Q08629 439 aa15.58■□□□□ 0.08
SHKBP1-227ENST00000602011 SYPL1Q16563 259 aa15.58■□□□□ 0.08
SHKBP1-227ENST00000602011 WBP2NLQ6ICG8 309 aa15.58■□□□□ 0.08
SHKBP1-227ENST00000602011 ZNF621Q6ZSS3 439 aa15.58■□□□□ 0.08
SHKBP1-227ENST00000602011 ANKK1Q8NFD2 765 aa15.58■□□□□ 0.08
SHKBP1-227ENST00000602011 OR9K2Q8NGE7 335 aa15.58■□□□□ 0.08
SHKBP1-227ENST00000602011 MAGEE2Q8TD90 523 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-227ENST00000602011 ZBTB18Q99592 522 aa15.58■□□□□ 0.08
SHKBP1-227ENST00000602011 KATNB1Q9BVA0 655 aa15.58■□□□□ 0.08
SHKBP1-227ENST00000602011 ZNF232Q9UNY5 417 aa15.58■□□□□ 0.08
SHKBP1-227ENST00000602011 ANK2Q01484 3957 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 LOC390937A0A1W2PQ73 354 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 WDR91A4D1P6 747 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 LIPT2A6NK58 231 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 CLDN24A6NM45 220 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 A8MVM7 634 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 B9A039 149 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 RGS16O15492 202 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 CRYAAP02489 173 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 PGRP06401 933 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 FOXG1P55316 489 aaPredicted RBP15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 STX3Q13277 289 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 CEACAM7Q14002 265 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 CROCCP2Q86T23 111 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 ANKFN1Q8N957 763 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 ZIC4Q8N9L1 334 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 PPP1R36Q96LQ0 422 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 OR52E6Q96RD3 313 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 PIMREGQ9BSJ6 248 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 CACYBPQ9HB71 228 aaKnown RBP15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 KCNS2Q9ULS6 477 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 RASD1Q9Y272 281 aa15.57■□□□□ 0.08
SHKBP1-227ENST00000602011 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 CDHR4A6H8M9 788 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 ZNF587BE7ETH6 402 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 AP3D1O14617 1153 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 IL6P05231 212 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 CHRM4P08173 479 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 IGHV4-31P0DP07 118 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 HNF1AP20823 631 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 SERPINF1P36955 418 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 SH3BGRP55822 239 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 UBE2NP61088 152 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 VSNL1P62760 191 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 PLAURQ03405 335 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 KRTAP24-1Q3LI83 254 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 LIN52Q52LA3 116 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 MRPL2Q5T653 305 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 FAM166AQ6J272 317 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 WDR93Q6P2C0 686 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 MREGQ8N565 214 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 TMEM99Q8N816 258 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 OR4F15Q8NGB8 312 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 AENQ8WTP8 325 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 SLC35B4Q969S0 331 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 AURKBQ96GD4 344 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 NUF2Q9BZD4 464 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 MANSC1Q9H8J5 431 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 P2RX2Q9UBL9 471 aa15.56■□□□□ 0.08
SHKBP1-227ENST00000602011 ARPC4-TTLL3A0A0A6YYG9 625 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 TMEM247A6NEH6 219 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 VWC2LB2RUY7 222 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 C8BP07358 591 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 ERCC1P07992 297 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 TFPTP0C1Z6 253 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 NR4A2P43354 598 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 CRISP3P54108 245 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 LARS2Q15031 903 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 OR7A5Q15622 319 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 EFNB3Q15768 340 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 MST1LQ2TV78 715 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 KRT71Q3SY84 523 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 C9orf135Q5VTT2 229 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 UGT2A3Q6UWM9 527 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 CREB3L2Q70SY1 520 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 GPAT4Q86UL3 456 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 CCDC36Q8IYA8 594 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 IL17RDQ8NFM7 739 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 OR52P1PQ8NH57 321 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 STK35Q8TDR2 534 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 FBXO17Q96EF6 278 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 PKNOX2Q96KN3 472 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 SLC38A2Q96QD8 506 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 SORT1Q99523 831 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 LINC00470Q9BZP3 86 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 AIG1Q9NVV5 245 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 MOKQ9UQ07 419 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 IFT52Q9Y366 437 aa15.55■□□□□ 0.08
SHKBP1-227ENST00000602011 ZC3H12DA2A288 527 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 TRPC5OSA6NMA1 111 aa15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 ATP6V1G2-DDX39BF2Z307 99 aa15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 SLCO1B7G3V0H7 640 aa15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 RFXANKO14593 260 aa15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 AKR7A3O95154 331 aa15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 ZCCHC18P0CG32 403 aa15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 SRD5A1P18405 259 aa15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 UFM1P61960 85 aa15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 SQLEQ14534 574 aa15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 TBRG1Q3YBR2 411 aa15.54■□□□□ 0.08
SHKBP1-227ENST00000602011 RNF220Q5VTB9 566 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms