RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 SLC25A15Q9Y619 301 aa14.46□□□□□ -0.09
SHKBP1-215ENST00000597649 NPIPB9F8W1W9 429 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 H7C417 338 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 HAX1O00165 279 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 RAD51DO75771 328 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 OR12D1P0DN82 309 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 SLC7A1P30825 629 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 MAGEA8P43361 318 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 NUDT2P50583 147 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 FABP6P51161 128 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 FOXG1P55316 489 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 SUMO3P55854 103 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 LSM11P83369 360 aaKnown RBP eCLIP14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 MXRA7P84157 204 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 CHRNEQ04844 493 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 SELENBP1Q13228 472 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 RUNDC3AQ59EK9 446 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 TMEM108Q6UXF1 575 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 C16orf62Q7Z3J2 963 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 ZNF100Q8IYN0 542 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 FBXL14Q8N1E6 418 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 OR5D16Q8NGK9 328 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 MIPOL1Q8TD10 442 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 PROX1Q92786 737 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 ROPN1LQ96C74 230 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 NSL1Q96IY1 281 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 ANKRD27Q96NW4 1050 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 OR5B2Q96R09 309 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 C1QTNF6Q9BXI9 259 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 AMBRA1Q9C0C7 1298 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 QRSL1Q9H0R6 528 aaKnown RBP14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 ARL8BQ9NVJ2 186 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 MGAT4BQ9UQ53 548 aa14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 NUP214P35658 2090 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-215ENST00000597649 TMEM247A6NEH6 219 aa14.44□□□□□ -0.1
SHKBP1-215ENST00000597649 GTPBP1O00178 669 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-215ENST00000597649 SRD5A1P18405 259 aa14.44□□□□□ -0.1
SHKBP1-215ENST00000597649 ATP6V1C1P21283 382 aa14.44□□□□□ -0.1
SHKBP1-215ENST00000597649 USF1P22415 310 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-215ENST00000597649 PTAFRP25105 342 aa14.44□□□□□ -0.1
SHKBP1-215ENST00000597649 ATP12AP54707 1039 aa14.44□□□□□ -0.1
SHKBP1-215ENST00000597649 QPRTQ15274 297 aa14.44□□□□□ -0.1
SHKBP1-215ENST00000597649 RGNQ15493 299 aa14.44□□□□□ -0.1
SHKBP1-215ENST00000597649 COX20Q5RI15 118 aa14.44□□□□□ -0.1
SHKBP1-215ENST00000597649 GALNT5Q7Z7M9 940 aa14.44□□□□□ -0.1
SHKBP1-215ENST00000597649 MSRB3Q8IXL7 192 aa14.44□□□□□ -0.1
SHKBP1-215ENST00000597649 OR5W2Q8NH69 310 aa14.44□□□□□ -0.1
SHKBP1-215ENST00000597649 RAB8BQ92930 207 aa14.44□□□□□ -0.1
SHKBP1-215ENST00000597649 HOXD1Q9GZZ0 328 aa14.44□□□□□ -0.1
SHKBP1-215ENST00000597649 THUMPD1Q9NXG2 353 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-215ENST00000597649 POU2F3Q9UKI9 436 aa14.44□□□□□ -0.1
SHKBP1-215ENST00000597649 TRBV5-3A0A0A0MS03 114 aa14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 AK1P00568 194 aa14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 HOXB9P17482 250 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 DIO1P49895 249 aa14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 EFNA4P52798 201 aa14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 DSTNP60981 165 aa14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 HPCAP84074 193 aa14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 FADDQ13158 208 aa14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 FAM120AOSQ5T036 256 aa14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 DCST2Q5T1A1 773 aa14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 FBXW9Q5XUX1 488 aa14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 SSX8Q7RTT4 187 aa14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 LSRQ86X29 649 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 WDR31Q8NA23 367 aa14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 ZNF527Q8NB42 609 aa14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 MSI2Q96DH6 328 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 MUS81Q96NY9 551 aa14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 HOPXQ9BPY8 73 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 CPPED1Q9BRF8 314 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 SERHL2Q9H4I8 314 aa14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 KCNE5Q9UJ90 142 aa14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 DTNAQ9Y4J8 743 aa14.43□□□□□ -0.1
SHKBP1-215ENST00000597649 HEATR1Q9H583 2144 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 ARFGEF3Q5TH69 2177 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 IGKV3D-15A0A087WSY6 115 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 CIB4A0PJX0 185 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 CCT8L1PA6NM43 557 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 VWC2LB2RUY7 222 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 H3BNH8 94 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 M0R1B8 84 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 HMGN4O00479 90 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 EIF4E2O60573 245 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 DNAJA2O60884 412 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 C1QCP02747 245 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 NR2F1P10589 423 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 ETFAP13804 333 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 CALB2P22676 271 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 MTPNP58546 118 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 MST1LQ2TV78 715 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 GPAT3Q53EU6 434 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 ABLIM2Q6H8Q1 611 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 NANOGP8Q6NSW7 305 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 ZNF544Q6NX49 715 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 HACD2Q6Y1H2 254 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 TMPPEQ6ZT21 453 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 ARPINQ7Z6K5 226 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 UBE2J2Q8N2K1 259 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 OR8J3Q8NGG0 315 aa14.42□□□□□ -0.1
SHKBP1-215ENST00000597649 ECSITQ9BQ95 431 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms