RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 MAMDC2Q7Z304 686 aaPredicted RBP9.47□□□□□ -0.89
VPS25-203ENST00000589520 KCTD20Q7Z5Y7 419 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 MARCH3Q86UD3 253 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 JAZF1Q86VZ6 243 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 DND1Q8IYX4 353 aaKnown RBP9.47□□□□□ -0.89
VPS25-203ENST00000589520 SYS1Q8N2H4 156 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 MFSD4AQ8N468 514 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 MS4A15Q8N5U1 240 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 C10orf53Q8N6V4 93 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 SLC38A9Q8NBW4 561 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 OR52E2Q8NGJ4 325 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 GPR119Q8TDV5 335 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 RNF138Q8WVD3 245 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 SPRYD4Q8WW59 207 aaPredicted RBP9.47□□□□□ -0.89
VPS25-203ENST00000589520 SMPDL3BQ92485 455 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 TM9SF4Q92544 642 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 KISS1RQ969F8 398 aaPredicted RBP9.47□□□□□ -0.89
VPS25-203ENST00000589520 SLC25A46Q96AG3 418 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 CEP19Q96LK0 163 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 SNX18Q96RF0 628 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 DDOQ99489 341 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 SPSB2Q99619 263 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 CRB3Q9BUF7 120 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 C6orf62Q9GZU0 229 aaPredicted RBP9.47□□□□□ -0.89
VPS25-203ENST00000589520 RIF1Q5UIP0 2472 aaKnown RBP9.47□□□□□ -0.89
VPS25-203ENST00000589520 NUP210LQ5VU65 1888 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 VPS13AQ96RL7 3174 aa9.47□□□□□ -0.89
VPS25-203ENST00000589520 FAM186AA6NE01 2351 aa9.46□□□□□ -0.89
VPS25-203ENST00000589520 PCDH15Q96QU1 1955 aa9.46□□□□□ -0.89
VPS25-203ENST00000589520 ACACBO00763 2458 aa9.46□□□□□ -0.89
VPS25-203ENST00000589520 ARPC4-TTLL3A0A0A6YYG9 625 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 SLC35F4A4IF30 521 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 ANKUB1A6NFN9 424 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 FAM183AA6NL82 134 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 MCIDASD6RGH6 385 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 PLPP2O43688 288 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 GLCEO94923 617 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 SERPINA3P01011 423 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 SP9P0CG40 484 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 HIST1H1CP16403 213 aaKnown RBP9.46□□□□□ -0.9
VPS25-203ENST00000589520 SDHAP31040 664 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 SLC16A1P53985 500 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 RPS3AP61247 264 aaKnown RBP9.46□□□□□ -0.9
VPS25-203ENST00000589520 E2F1Q01094 437 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 EXT1Q16394 746 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 ZNF181Q2M3W8 571 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 CCDC58Q4VC31 144 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 SPANXN2Q5MJ10 180 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 FAM69AQ5T7M9 428 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 FAAH2Q6GMR7 532 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 NANOGNBQ7Z5D8 188 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 IGFN1Q86VF2 1251 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 PRR22Q8IZ63 422 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 SIRT6Q8N6T7 355 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 BMPERQ8N8U9 685 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 TMEM105Q8N8V8 129 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 LRRC75AQ8NAA5 344 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 GATSQ8NAP1 163 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 NPEPL1Q8NDH3 523 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 ATP6V1C2Q8NEY4 427 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 OR4K13Q8NH42 304 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 CHPT1Q8WUD6 406 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 PHYHIPQ92561 330 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 HGDQ93099 445 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 COX4I2Q96KJ9 171 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 WDFY2Q96P53 400 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 CNN2Q99439 309 aaKnown RBP9.46□□□□□ -0.9
VPS25-203ENST00000589520 CMKLR1Q99788 373 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 WDR77Q9BQA1 342 aaPredicted RBP9.46□□□□□ -0.9
VPS25-203ENST00000589520 GTPBP2Q9BX10 602 aaKnown RBP9.46□□□□□ -0.9
VPS25-203ENST00000589520 NMNAT2Q9BZQ4 307 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 NRSN2Q9GZP1 204 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 ADGRL4Q9HBW9 690 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 RXFP3Q9NSD7 469 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 OCIAD1Q9NX40 245 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 TAS2R10Q9NYW0 307 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 CORINQ9Y5Q5 1042 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 CACNA1EQ15878 2313 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 TNRC6BQ9UPQ9 1833 aaKnown RBP9.46□□□□□ -0.9
VPS25-203ENST00000589520 SCN2AQ99250 2005 aa9.46□□□□□ -0.9
VPS25-203ENST00000589520 DNAH14Q0VDD8 3507 aa9.45□□□□□ -0.9
VPS25-203ENST00000589520 TP53BP1Q12888 1972 aaPredicted RBP9.45□□□□□ -0.9
VPS25-203ENST00000589520 IGLV3-32A0A0A0MS00 114 aa9.45□□□□□ -0.9
VPS25-203ENST00000589520 TMED7-TICAM2A0A0A6YYA0 188 aa9.45□□□□□ -0.9
VPS25-203ENST00000589520 TRBV11-1A0A0K0K1C0 115 aa9.45□□□□□ -0.9
VPS25-203ENST00000589520 CDC14CA4D256 554 aa9.45□□□□□ -0.9
VPS25-203ENST00000589520 PATE3B3GLJ2 98 aa9.45□□□□□ -0.9
VPS25-203ENST00000589520 BLOC1S5-TXNDC5H3BN57 136 aa9.45□□□□□ -0.9
VPS25-203ENST00000589520 ETV2O00321 342 aaPredicted RBP9.45□□□□□ -0.9
VPS25-203ENST00000589520 TP53I11O14683 189 aa9.45□□□□□ -0.9
VPS25-203ENST00000589520 GNB5O14775 395 aa9.45□□□□□ -0.9
VPS25-203ENST00000589520 ZNF208O43345 1280 aa9.45□□□□□ -0.9
VPS25-203ENST00000589520 OIP5O43482 229 aa9.45□□□□□ -0.9
VPS25-203ENST00000589520 NPIPB7O75200 414 aa9.45□□□□□ -0.9
VPS25-203ENST00000589520 TMEM127O75204 238 aa9.45□□□□□ -0.9
VPS25-203ENST00000589520 SULT1C4O75897 302 aa9.45□□□□□ -0.9
VPS25-203ENST00000589520 TIAF1O95411 115 aa9.45□□□□□ -0.9
VPS25-203ENST00000589520 NUDT14O95848 222 aa9.45□□□□□ -0.9
VPS25-203ENST00000589520 RENP00797 406 aa9.45□□□□□ -0.9
VPS25-203ENST00000589520 BGLAPP02818 100 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms