RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 COMTD1Q86VU5 262 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 CARM1Q86X55 608 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 LURAP1LQ8IV03 231 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 ZDHHC21Q8IVQ6 265 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 PQLC1Q8N2U9 271 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 CLIP4Q8N3C7 705 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 ZNF610Q8N9Z0 462 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 ROBO4Q8WZ75 1007 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 ST8SIA1Q92185 356 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 ZNF524Q96C55 264 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 GMPPAQ96IJ6 420 aaPredicted RBP12.94□□□□□ -0.34
COMMD4-225ENST00000569245 CLEC4MQ9H2X3 399 aaPredicted RBP12.94□□□□□ -0.34
COMMD4-225ENST00000569245 GLRX2Q9NS18 164 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 C6orf203Q9P0P8 240 aaPredicted RBP12.94□□□□□ -0.34
COMMD4-225ENST00000569245 NDRG3Q9UGV2 375 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 ANKHD1Q8IWZ3 2542 aaKnown RBP12.93□□□□□ -0.34
COMMD4-225ENST00000569245 SH3D21A4FU49 640 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 CLDN24A6NM45 220 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 NTN1O95631 604 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 CD8BP10966 210 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 POU2F1P14859 743 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 TNFRSF1BP20333 461 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 OR1E2P47887 323 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 ATP6AP1Q15904 470 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 SLC25A53Q5H9E4 307 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 ZNF474Q6S9Z5 364 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-225ENST00000569245 TSEN54Q7Z6J9 526 aaKnown RBP12.93□□□□□ -0.34
COMMD4-225ENST00000569245 OR4D11Q8NGI4 311 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 CPNE4Q96A23 557 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-225ENST00000569245 DOCK7Q96N67 2140 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 DACH2Q96NX9 599 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 ZNF300Q96RE9 604 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-225ENST00000569245 AMBRA1Q9C0C7 1298 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 RASSF1Q9NS23 344 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 ACER3Q9NUN7 267 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 ELOVL5Q9NYP7 299 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 NDUFAF4Q9P032 175 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 NKX1-2Q9UD57 310 aaPredicted RBP12.93□□□□□ -0.34
COMMD4-225ENST00000569245 RIMS3Q9UJD0 308 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 ENPP4Q9Y6X5 453 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 OTOGQ6ZRI0 2925 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 PCNX3Q9H6A9 2034 aa12.93□□□□□ -0.34
COMMD4-225ENST00000569245 A0A1W2PNR3 127 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 M0R3H8 397 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 CLOCKO15516 846 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 SS18L1O75177 396 aaPredicted RBP12.92□□□□□ -0.34
COMMD4-225ENST00000569245 BCAS1O75363 584 aaPredicted RBP12.92□□□□□ -0.34
COMMD4-225ENST00000569245 DEAF1O75398 565 aaPredicted RBP12.92□□□□□ -0.34
COMMD4-225ENST00000569245 PRSS23O95084 383 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 BAG2O95816 211 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 CGAP01215 116 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 TFPIP10646 304 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 CD79BP40259 229 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 PLAURQ03405 335 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 SLC34A1Q06495 639 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 DAZAP2Q15038 168 aaPredicted RBP12.92□□□□□ -0.34
COMMD4-225ENST00000569245 HMBOX1Q6NT76 420 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 C3orf33Q6P1S2 294 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 FAM71CQ8NEG0 241 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 OR6T1Q8NGN1 323 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 OR6K3Q8NGY3 331 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 LRTOMTQ8WZ04 291 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 CNOT9Q92600 299 aaKnown RBP12.92□□□□□ -0.34
COMMD4-225ENST00000569245 NRGNQ92686 78 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 OR5B2Q96R09 309 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 ZNF347Q96SE7 839 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 PKP2Q99959 881 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 WFDC6Q9BQY6 131 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 SRXN1Q9BYN0 137 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 KLHL4Q9C0H6 718 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 C12orf49Q9H741 205 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 EXOSC3Q9NQT5 275 aaKnown RBP12.92□□□□□ -0.34
COMMD4-225ENST00000569245 RLIMQ9NVW2 624 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 DNAJB9Q9UBS3 223 aa12.92□□□□□ -0.34
COMMD4-225ENST00000569245 C16orf97H3BN30 126 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 hCG_2039718K7EN88 272 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 ETV2O00321 342 aaPredicted RBP12.91□□□□□ -0.34
COMMD4-225ENST00000569245 FMO6PO60774 539 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 CST1P01037 141 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 MT-ND1P03886 318 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 UQCRBP14927 111 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 RHCEP18577 417 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 CCNA2P20248 432 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 UGT2B10P36537 528 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 APOBEC1P41238 236 aaKnown RBP12.91□□□□□ -0.34
COMMD4-225ENST00000569245 IDH2P48735 452 aaKnown RBP12.91□□□□□ -0.34
COMMD4-225ENST00000569245 RGS8P57771 180 aaPredicted RBP12.91□□□□□ -0.34
COMMD4-225ENST00000569245 RNPS1Q15287 305 aaKnown RBP12.91□□□□□ -0.34
COMMD4-225ENST00000569245 GUSBP1Q15486 140 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 NPTX1Q15818 432 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 ZNF239Q16600 458 aaKnown RBP12.91□□□□□ -0.34
COMMD4-225ENST00000569245 TMEM201Q5SNT2 666 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 PLEKHM3Q6ZWE6 761 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 FCRLAQ7L513 359 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 ZNF550Q7Z398 422 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 STK32CQ86UX6 486 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 RBM45Q8IUH3 476 aaKnown RBP12.91□□□□□ -0.34
COMMD4-225ENST00000569245 ZNF440Q8IYI8 595 aa12.91□□□□□ -0.34
COMMD4-225ENST00000569245 VANGL1Q8TAA9 524 aaPredicted RBP12.91□□□□□ -0.34
COMMD4-225ENST00000569245 ABHD3Q8WU67 409 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms