RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 PINLYPA6NC86 204 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 ARGFXA6NJG6 315 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 TMCO5BA8MYB1 307 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 DFFAO00273 331 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 MAPK13O15264 365 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 SLC7A4O43246 635 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 HSF2BPO75031 334 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 CLDN11O75508 207 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 TM7SF2O76062 418 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 OR6A2O95222 327 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 SLC16A8O95907 504 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 GP1BAP07359 652 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 PAEPP09466 180 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 ALPIP09923 528 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 EZRP15311 586 aaKnown RBP2.22□□□□□ -2.05
SCFD1-219ENST00000556413 CMA1P23946 247 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 UGT1A3P35503 534 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 ACTR1BP42025 376 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 MTIF2P46199 727 aaKnown RBP2.22□□□□□ -2.05
SCFD1-219ENST00000556413 CCR4P51679 360 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 ACTR1AP61163 376 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 MAXP61244 160 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 YWHAEP62258 255 aaKnown RBP2.22□□□□□ -2.05
SCFD1-219ENST00000556413 KRT83P78385 493 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 SCN1BQ07699 218 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 SLC3A1Q07837 685 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 CDC20Q12834 499 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 CYTH1Q15438 398 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 SPHARQ15513 63 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 CCDC14Q49A88 953 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 C14orf28Q4W4Y0 310 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 NHSL2Q5HYW2 709 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 DCAF12Q5T6F0 453 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 ZNF658Q5TYW1 1059 aaPredicted RBP2.22□□□□□ -2.05
SCFD1-219ENST00000556413 RAET1GQ6H3X3 334 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 SCYL2Q6P3W7 929 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 NPWQ8N729 165 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 SAMD12Q8N8I0 201 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 Q8N9L7 120 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 CCDC197Q8NCU1 140 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 CHDHQ8NE62 594 aaPredicted RBP2.22□□□□□ -2.05
SCFD1-219ENST00000556413 OR1K1Q8NGR3 316 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 ZNF606Q8WXB4 792 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 STARD8Q92502 1023 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 FAM162AQ96A26 154 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 CCDC47Q96A33 483 aaKnown RBP2.22□□□□□ -2.05
SCFD1-219ENST00000556413 MRPL24Q96A35 216 aaKnown RBP2.22□□□□□ -2.05
SCFD1-219ENST00000556413 PNPLA2Q96AD5 504 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 SLCO4A1Q96BD0 722 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 FAF2Q96CS3 445 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 C19orf60Q96EN9 201 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 RBM18Q96H35 190 aaKnown RBP2.22□□□□□ -2.05
SCFD1-219ENST00000556413 HSFY1Q96LI6 401 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 RAB40CQ96S21 281 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 NPY6RQ99463 290 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 CITED2Q99967 270 aaPredicted RBP2.22□□□□□ -2.05
SCFD1-219ENST00000556413 APOOQ9BUR5 198 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 MLPHQ9BV36 600 aaPredicted RBP2.22□□□□□ -2.05
SCFD1-219ENST00000556413 TBC1D10AQ9BXI6 508 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 TRIM7Q9C029 511 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 ZYG11BQ9C0D3 744 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 AKIRIN1Q9H9L7 192 aaPredicted RBP2.22□□□□□ -2.05
SCFD1-219ENST00000556413 GPN2Q9H9Y4 310 aaPredicted RBP2.22□□□□□ -2.05
SCFD1-219ENST00000556413 SLC39A1Q9NY26 324 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.22□□□□□ -2.05
SCFD1-219ENST00000556413 CGNQ9P2M7 1197 aaKnown RBP2.22□□□□□ -2.05
SCFD1-219ENST00000556413 DNAJC12Q9UKB3 198 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 HS3ST2Q9Y278 367 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 COQ4Q9Y3A0 265 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 MYLKQ15746 1914 aa2.22□□□□□ -2.05
SCFD1-219ENST00000556413 NYNRINQ9P2P1 1898 aaKnown RBP2.22□□□□□ -2.05
SCFD1-219ENST00000556413 DOCK9Q9BZ29 2069 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 IGHV3-35A0A0C4DH35 117 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 SH3PXD2BA1X283 911 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 FRG2CA6NGY1 282 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 PSMA7O14818 248 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 ALOX15BO15296 676 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 MED7O43513 233 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 ZNF861PO60384 105 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 STX10O60499 249 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 MTX2O75431 263 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 STK17BO94768 372 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 SLU7O95391 586 aaKnown RBP2.21□□□□□ -2.06
SCFD1-219ENST00000556413 LCA5LO95447 670 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 IGSF6O95976 241 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 ACTL6AO96019 429 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 TNFP01375 233 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 PLEKP08567 350 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-219ENST00000556413 PIRTP0C851 137 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 THRAP10827 490 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 NR2C1P13056 603 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 CPN1P15169 458 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 PGAM2P15259 253 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 CYP11B1P15538 503 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 CD1CP29017 333 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 DLSTP36957 453 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 FRKP42685 505 aaPredicted RBP2.21□□□□□ -2.06
SCFD1-219ENST00000556413 ACADSBP45954 432 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 CCL11P51671 97 aa2.21□□□□□ -2.06
SCFD1-219ENST00000556413 PLK1P53350 603 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms