RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 SLC16A1P53985 500 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 GYS2P54840 703 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 SLC35A1P78382 337 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 SLC25A3Q00325 362 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 TGFBR3Q03167 851 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 SF3A3Q12874 501 aaKnown RBP eCLIP10.05□□□□□ -0.8
RAB5C-203ENST00000546881 PDCD4Q53EL6 469 aaKnown RBP10.05□□□□□ -0.8
RAB5C-203ENST00000546881 SPANXN4Q5MJ08 99 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 TSPO2Q5TGU0 170 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 SAXO2Q658L1 398 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 KLHL24Q6TFL4 600 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 IL17RELQ6ZVW7 336 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 GLB1L3Q8NCI6 653 aaPredicted RBP10.05□□□□□ -0.8
RAB5C-203ENST00000546881 OR8J2Q8NGG1 315 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 MIPOL1Q8TD10 442 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 C10orf105Q8TEF2 133 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 EBF4Q9BQW3 602 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 SIKE1Q9BRV8 207 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 SLC35A5Q9BS91 424 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 AMBRA1Q9C0C7 1298 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 EXOSC3Q9NQT5 275 aaKnown RBP10.05□□□□□ -0.8
RAB5C-203ENST00000546881 FGFR1OP2Q9NVK5 253 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 LPAR3Q9UBY5 353 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 TRIM33Q9UPN9 1127 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 MOKQ9UQ07 419 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 FLVCR1Q9Y5Y0 555 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 GPR45Q9Y5Y3 372 aa10.05□□□□□ -0.8
RAB5C-203ENST00000546881 ALPK2Q86TB3 2170 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 LMX1BO60663 402 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 EIF1BO60739 113 aaKnown RBP10.04□□□□□ -0.8
RAB5C-203ENST00000546881 SHOX2O60902 331 aaPredicted RBP10.04□□□□□ -0.8
RAB5C-203ENST00000546881 SCN2BO60939 215 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 KRT33AO76009 404 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 WNT11O96014 354 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 C1QCP02747 245 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 TACR3P29371 465 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 PDLIM4P50479 330 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 PRPS1P60891 318 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 PHC1P78364 1004 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 LSM11P83369 360 aaKnown RBP eCLIP10.04□□□□□ -0.8
RAB5C-203ENST00000546881 CBX1P83916 185 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 SRSF2Q01130 221 aaKnown RBP10.04□□□□□ -0.8
RAB5C-203ENST00000546881 SYPL1Q16563 259 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 HIKESHIQ53FT3 197 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 OTUD3Q5T2D3 398 aaPredicted RBP10.04□□□□□ -0.8
RAB5C-203ENST00000546881 GPAT4Q86UL3 456 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 RNF130Q86XS8 419 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 C17orf78Q8N4C9 275 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 ANKFN1Q8N957 763 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 OIT3Q8WWZ8 545 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 PROX1Q92786 737 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 TESCQ96BS2 214 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 NEURL3Q96EH8 262 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 OR52E6Q96RD3 313 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 KCNS3Q9BQ31 491 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 PIMREGQ9BSJ6 248 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 SAP130Q9H0E3 1048 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 TMEM160Q9NX00 188 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 ZIM2Q9NZV7 527 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 OSGIN1Q9UJX0 560 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 KCNS2Q9ULS6 477 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 TRAPPC4Q9Y296 219 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 FKBP7Q9Y680 259 aa10.04□□□□□ -0.8
RAB5C-203ENST00000546881 LOC100289279A0A1B0GTE1 492 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 ZC3H12DA2A288 527 aaKnown RBP10.03□□□□□ -0.8
RAB5C-203ENST00000546881 PRAMEF27A3QJZ7 478 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 PDLIM1O00151 329 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 HMGN4O00479 90 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 ZNF208O43345 1280 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 AKR7A3O95154 331 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 ANP32DO95626 131 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 F12P00748 615 aaPredicted RBP10.03□□□□□ -0.8
RAB5C-203ENST00000546881 IL6P05231 212 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 PGRP06401 933 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 GUSBP08236 651 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 UQCRBP14927 111 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 IL7RP16871 459 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 SRD5A1P18405 259 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 MPGP29372 298 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 GZMKP49863 264 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 POLR2JP52435 117 aaKnown RBP10.03□□□□□ -0.8
RAB5C-203ENST00000546881 ARFIP2P53365 341 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 SNRPD2P62316 118 aaKnown RBP10.03□□□□□ -0.8
RAB5C-203ENST00000546881 H3F3AP84243 136 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 PLAURQ03405 335 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 CEACAM7Q14002 265 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 GNA13Q14344 377 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 SQLEQ14534 574 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 SLC17A1Q14916 467 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 OR7A5Q15622 319 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 KRTAP24-1Q3LI83 254 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 AAED1Q7RTV5 226 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 SLC46A3Q7Z3Q1 461 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 TRIML2Q8N7C3 387 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 C1orf162Q8NEQ5 155 aaPredicted RBP10.03□□□□□ -0.8
RAB5C-203ENST00000546881 PNPT1Q8TCS8 783 aaKnown RBP10.03□□□□□ -0.8
RAB5C-203ENST00000546881 WDR60Q8WVS4 1066 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 PMM1Q92871 262 aa10.03□□□□□ -0.8
RAB5C-203ENST00000546881 AURKBQ96GD4 344 aaPredicted RBP10.03□□□□□ -0.8
RAB5C-203ENST00000546881 TEX37Q96LM6 180 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms