RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 MTERF4Q7Z6M4 381 aaKnown RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 GALNT5Q7Z7M9 940 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 IZUMO1Q8IYV9 350 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 TRIML2Q8N7C3 387 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 GATSQ8NAP1 163 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 FNDC5Q8NAU1 212 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 OR2M3Q8NG83 312 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 OR7G2Q8NG99 324 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 OR4N2Q8NGD1 307 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 OR10D3Q8NH80 312 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 FBXO30Q8TB52 745 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 SMAP2Q8WU79 429 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 TMEM158Q8WZ71 300 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 FIG4Q92562 907 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 PIK3R3Q92569 461 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 AKAP1Q92667 903 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 CTHRC1Q96CG8 243 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 TUBGCP3Q96CW5 907 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 STARD4Q96DR4 205 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 MTERF3Q96E29 417 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 ELP4Q96EB1 424 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 L3HYPDHQ96EM0 354 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 RNF145Q96MT1 663 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 VSTM2LQ96N03 204 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 AMDHD1Q96NU7 426 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 TSSK3Q96PN8 268 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 OR5B2Q96R09 309 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZBTB18Q99592 522 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 RHOXF2Q9BQY4 288 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 NAA11Q9BSU3 229 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 DPCDQ9BVM2 203 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 BEX2Q9BXY8 128 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 POTEKPQ9BYX7 375 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 ACPTQ9BZG2 426 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 DPY30Q9C005 99 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 OR10A4Q9H209 315 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 REEP4Q9H6H4 257 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 TMEM185BQ9H7F4 350 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 PLEKHF2Q9H8W4 249 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 FKRPQ9H9S5 495 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 RNF122Q9H9V4 155 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 PROK2Q9HC23 129 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 PLSCR4Q9NRQ2 329 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 SELENONQ9NZV5 590 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 TMEM216Q9P0N5 145 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 CLCF1Q9UBD9 225 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 ATP6V1HQ9UI12 483 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF639Q9UID6 485 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 PYCARDQ9ULZ3 195 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 CLEC4AQ9UMR7 237 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 MGAT4BQ9UQ53 548 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 DTX4Q9Y2E6 619 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 MAGED1Q9Y5V3 778 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 FKBP7Q9Y680 259 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 PHF3Q92576 2039 aaKnown RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 NCOA6Q14686 2063 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 FBN2P35556 2912 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 ITPR3Q14573 2671 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 ABCA4P78363 2273 aa3.35□□□□□ -1.87
HMGN1P11-201ENST00000508668 SPG11Q96JI7 2443 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF407Q9C0G0 2248 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 TRIM64A6NGJ6 449 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 TRIM64BA6NI03 449 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 AQP7P3A6NL99 342 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 SULT2B1O00204 365 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 UPK1AO00322 258 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF195O14628 629 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZNF264O43296 627 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 RIPK2O43353 540 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 TLX2O43763 284 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 SSX4O60224 188 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 ZIC3O60481 467 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 SCN2BO60939 215 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 SS18L1O75177 396 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 MRPL33O75394 65 aaKnown RBP3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 STX11O75558 287 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 TNFSF13O75888 250 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 ANP32DO95626 131 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 OXSR1O95747 527 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 LY6G6DO95868 133 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 ADAP00813 363 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 CLPSP04118 112 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 IFI6P09912 130 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 CSF3P09919 207 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 LINC00032P0C843 101 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 DHRS4L1P0CG22 281 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 CT45A8P0DMV1 189 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 CT45A9P0DMV2 189 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 UBL4AP11441 157 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 GGT1P19440 569 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 NCF2P19878 526 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 PRPS1L1P21108 318 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 S1PR1P21453 382 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 PAX7P23759 505 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 ELK4P28324 431 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 HTR3AP46098 478 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 SLCO1A2P46721 670 aa3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 CCT3P49368 545 aaKnown RBP3.34□□□□□ -1.87
HMGN1P11-201ENST00000508668 FABP6P51161 128 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms