RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 RABEPKQ7Z6M1 372 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 PAQR7Q86WK9 346 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 MISPQ8IVT2 679 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 OR10A7Q8NGE5 316 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 OR1N2Q8NGR9 330 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 NANPQ8TBE9 248 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 RAET1EQ8TD07 263 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 HTR3CQ8WXA8 447 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 BMFQ96LC9 184 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 SLC6A7Q99884 636 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 C20orf85Q9H1P6 137 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 RANBP3Q9H6Z4 567 aaPredicted RBP0.84□□□□□ -2.27
CCDC93-209ENST00000488908 SUDS3Q9H7L9 328 aaPredicted RBP0.84□□□□□ -2.27
CCDC93-209ENST00000488908 ECT2Q9H8V3 914 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 VAT1LQ9HCJ6 419 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 YAE1D1Q9NRH1 226 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 CCL28Q9NRJ3 127 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 AGPAT5Q9NUQ2 364 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 SOHLH2Q9NX45 425 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 AATFQ9NY61 560 aaKnown RBP eCLIP0.84□□□□□ -2.27
CCDC93-209ENST00000488908 PCYOX1Q9UHG3 505 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 SLC25A15Q9Y619 301 aa0.84□□□□□ -2.27
CCDC93-209ENST00000488908 SDK2Q58EX2 2172 aa0.84□□□□□ -2.28
CCDC93-209ENST00000488908 SPAG9O60271 1321 aaKnown RBP0.84□□□□□ -2.28
CCDC93-209ENST00000488908 FRMPD4Q14CM0 1322 aa0.84□□□□□ -2.28
CCDC93-209ENST00000488908 SHROOM3Q8TF72 1996 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 PEX7O00628 323 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 ENTPD5O75356 428 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 B3GAT3O94766 335 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 POLR2MP0CAP2 368 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 ABOP16442 354 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 TPSB2P20231 275 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 CXCR2P25025 360 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 CALCRP30988 508 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 PTGDSP41222 190 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 PTGFRP43088 359 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 AP3M2P53677 418 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 HMGCS1Q01581 520 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 HSF2Q03933 536 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 KLHL30Q0D2K2 578 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 ASPHQ12797 758 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 GRB7Q14451 532 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 KIAA0087Q14695 138 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 CYTH1Q15438 398 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 TRIP10Q15642 601 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 TPSAB1Q15661 275 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 TRIM16LQ309B1 348 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 PARP15Q460N3 678 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 LINC01620Q4KN68 170 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 COA6Q5JTJ3 125 aaKnown RBP0.83□□□□□ -2.28
CCDC93-209ENST00000488908 SAMD4BQ5PRF9 694 aaKnown RBP0.83□□□□□ -2.28
CCDC93-209ENST00000488908 FBXW9Q5XUX1 488 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 CBLN3Q6UW01 205 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 BHLHA15Q7RTS1 189 aaPredicted RBP0.83□□□□□ -2.28
CCDC93-209ENST00000488908 LHFPL4Q7Z7J7 247 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 KIR3DL3Q8N743 410 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 FAM86B1Q8N7N1 296 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 MSANTD4Q8NCY6 345 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 OR4F15Q8NGB8 312 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 SYNPRQ8TBG9 265 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 CD300LFQ8TDQ1 290 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 PAGE5Q96GU1 130 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 OR10C1Q96KK4 312 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 TMEM246Q9BRR3 403 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 NAT9Q9BTE0 207 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 FICDQ9BVA6 458 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 ACAT2Q9BWD1 397 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 RAB17Q9H0T7 212 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 DEFB127Q9H1M4 99 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 RHBGQ9H310 441 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 THAP9Q9H5L6 903 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 CLMPQ9H6B4 373 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 ACTR8Q9H981 624 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 IL26Q9NPH9 171 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 ATXN10Q9UBB4 475 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 COPS3Q9UNS2 423 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 MGAT4BQ9UQ53 548 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 MRPS33Q9Y291 106 aaKnown RBP0.83□□□□□ -2.28
CCDC93-209ENST00000488908 SAMHD1Q9Y3Z3 626 aaKnown RBP0.83□□□□□ -2.28
CCDC93-209ENST00000488908 HEBP2Q9Y5Z4 205 aa0.83□□□□□ -2.28
CCDC93-209ENST00000488908 PHF3Q92576 2039 aaKnown RBP0.82□□□□□ -2.28
CCDC93-209ENST00000488908 NUP214P35658 2090 aaPredicted RBP0.82□□□□□ -2.28
CCDC93-209ENST00000488908 A0A1W2PP18 115 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 VSTM2BA6NLU5 285 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 C12orf71A8MTZ7 269 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 ZNF705GA8MUZ8 300 aaPredicted RBP0.82□□□□□ -2.28
CCDC93-209ENST00000488908 IDSB3KWA1 339 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 TRDCB7Z8K6 153 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 NPIPA7E9PJI5 369 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 DCTN6O00399 190 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 RASGRF2O14827 1237 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 RRP8O43159 456 aaKnown RBP0.82□□□□□ -2.28
CCDC93-209ENST00000488908 MBTPS2O43462 519 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 CXCL13O43927 109 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 UGT1A9O60656 530 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 VPS26AO75436 327 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 BCAS2O75934 225 aaPredicted RBP0.82□□□□□ -2.28
CCDC93-209ENST00000488908 LRATO95237 230 aa0.82□□□□□ -2.28
CCDC93-209ENST00000488908 KLK3P07288 261 aaPredicted RBP0.82□□□□□ -2.28
CCDC93-209ENST00000488908 ZDHHC11BP0C7U3 371 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 223.6 ms