RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 PRICKLE2Q7Z3G6 844 aa9.94□□□□□ -0.82
HDLBP-242ENST00000488013 GTF2IRD2Q86UP8 949 aa9.94□□□□□ -0.82
HDLBP-242ENST00000488013 EPHX4Q8IUS5 362 aa9.94□□□□□ -0.82
HDLBP-242ENST00000488013 EXD3Q8N9H8 876 aa9.94□□□□□ -0.82
HDLBP-242ENST00000488013 ATP6V1C2Q8NEY4 427 aa9.94□□□□□ -0.82
HDLBP-242ENST00000488013 OR9Q2Q8NGE9 314 aa9.94□□□□□ -0.82
HDLBP-242ENST00000488013 OR52L1Q8NGH7 329 aa9.94□□□□□ -0.82
HDLBP-242ENST00000488013 OR2V1Q8NHB1 315 aa9.94□□□□□ -0.82
HDLBP-242ENST00000488013 PFN4Q8NHR9 129 aa9.94□□□□□ -0.82
HDLBP-242ENST00000488013 FAR1Q8WVX9 515 aa9.94□□□□□ -0.82
HDLBP-242ENST00000488013 TAAR8Q969N4 342 aa9.94□□□□□ -0.82
HDLBP-242ENST00000488013 CPNE4Q96A23 557 aaPredicted RBP9.94□□□□□ -0.82
HDLBP-242ENST00000488013 KTI12Q96EK9 354 aaPredicted RBP9.94□□□□□ -0.82
HDLBP-242ENST00000488013 FAM46AQ96IP4 442 aaKnown RBP9.94□□□□□ -0.82
HDLBP-242ENST00000488013 UBL7Q96S82 380 aaPredicted RBP9.94□□□□□ -0.82
HDLBP-242ENST00000488013 KLHDC3Q9BQ90 382 aa9.94□□□□□ -0.82
HDLBP-242ENST00000488013 Q9H521 79 aa9.94□□□□□ -0.82
HDLBP-242ENST00000488013 NPIPA1Q9UND3 350 aa9.94□□□□□ -0.82
HDLBP-242ENST00000488013 BAIAP2Q9UQB8 552 aa9.94□□□□□ -0.82
HDLBP-242ENST00000488013 CDH10Q9Y6N8 788 aa9.94□□□□□ -0.82
HDLBP-242ENST00000488013 ZFHX4Q86UP3 3567 aa9.94□□□□□ -0.82
HDLBP-242ENST00000488013 ATRXP46100 2492 aa9.94□□□□□ -0.82
HDLBP-242ENST00000488013 CFAP47Q6ZTR5 3102 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 LOC102725191A0A1B0GVB3 256 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 AHRRA9YTQ3 701 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 FTCDNL1E5RQL4 147 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 M0R3G1 203 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 SOCS2O14508 198 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 EFNA2O43921 213 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 ASAH2BP0C7U1 165 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 FCGR2AP12318 317 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 APEHP13798 732 aaKnown RBP9.93□□□□□ -0.82
HDLBP-242ENST00000488013 TCEA1P23193 301 aaKnown RBP9.93□□□□□ -0.82
HDLBP-242ENST00000488013 SFTPDP35247 375 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 RPS5P46782 204 aaKnown RBP9.93□□□□□ -0.82
HDLBP-242ENST00000488013 DIO1P49895 249 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 LHX2P50458 406 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 DAPP51397 102 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 AGFG1P52594 562 aaKnown RBP9.93□□□□□ -0.82
HDLBP-242ENST00000488013 RBPJQ06330 500 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 PMS2P3Q13401 168 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 LAPTM4AQ15012 233 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 ZNF239Q16600 458 aaKnown RBP9.93□□□□□ -0.82
HDLBP-242ENST00000488013 ZBED5Q49AG3 693 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 TTC23Q5W5X9 447 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 ZNF324BQ6AW86 544 aaPredicted RBP9.93□□□□□ -0.82
HDLBP-242ENST00000488013 HBMQ6B0K9 141 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 SMARCD3Q6STE5 483 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 HDDC2Q7Z4H3 204 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 NANOGNBQ7Z5D8 188 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 HS3ST5Q8IZT8 346 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 GALNT4Q8N4A0 578 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 ZNF555Q8NEP9 628 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 OR5M1Q8NGP8 315 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 OR5J2Q8NH18 312 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 TEX47Q8TBZ9 253 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 GTPBP3Q969Y2 492 aaKnown RBP9.93□□□□□ -0.82
HDLBP-242ENST00000488013 PTDSS2Q9BVG9 487 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 GABARAPL3Q9BY60 117 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 OR11A1Q9GZK7 315 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 SLC6A15Q9H2J7 730 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 TMEM185BQ9H7F4 350 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 SMURF2Q9HAU4 748 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 C20orf141Q9NUB4 165 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 IL20Q9NYY1 176 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 MCTS1Q9ULC4 181 aaKnown RBP9.93□□□□□ -0.82
HDLBP-242ENST00000488013 RASD1Q9Y272 281 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 HIF3AQ9Y2N7 669 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 SLC6A5Q9Y345 797 aa9.93□□□□□ -0.82
HDLBP-242ENST00000488013 ZC3H12DA2A288 527 aaKnown RBP9.92□□□□□ -0.82
HDLBP-242ENST00000488013 NPIPB13A6NJU9 1138 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 TTLL8A6PVC2 850 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 SHISA8B8ZZ34 492 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 NPIPB4C9JG80 1138 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 H0YAE9 185 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 H3BN98 237 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 EIF1AYO14602 144 aaKnown RBP9.92□□□□□ -0.82
HDLBP-242ENST00000488013 IDH3BO43837 385 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 PTP4A3O75365 173 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 NDUFB2O95178 105 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 SYNGR4O95473 234 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 BGLAPP02818 100 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 HMGN1P05114 100 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 CELA3AP09093 270 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 POU2F1P14859 743 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 GABRA1P14867 456 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 MAKP20794 623 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 IL11P20809 199 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 SLC6A6P31641 620 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 GPR4P46093 362 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 SMSP52788 366 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 CLDN18P56856 261 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 OR2B6P58173 313 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 RPS4XP62701 263 aaKnown RBP9.92□□□□□ -0.82
HDLBP-242ENST00000488013 PMP22Q01453 160 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 IL1RL1Q01638 556 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 ZP4Q12836 540 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 IL18R1Q13478 541 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 OR7A5Q15622 319 aa9.92□□□□□ -0.82
HDLBP-242ENST00000488013 DPY19L2P2Q6ZN68 376 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms