RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ELOA3Q8NG57 546 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 OR9K2Q8NGE7 335 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 OR52E4Q8NGH9 312 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 OR10A6Q8NH74 314 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 KTI12Q96EK9 354 aaPredicted RBP11.38□□□□□ -0.59
HDAC1-209ENST00000484305 ZNF385AQ96PM9 386 aaKnown RBP11.38□□□□□ -0.59
HDAC1-209ENST00000484305 PTDSS2Q9BVG9 487 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 TAPBPLQ9BX59 468 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 CCDC134Q9H6E4 229 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 MED4Q9NPJ6 270 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 SAR1AQ9NR31 198 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 ASB6Q9NWX5 421 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 SLC9A8Q9Y2E8 581 aa11.38□□□□□ -0.59
HDAC1-209ENST00000484305 ZNF469Q96JG9 3925 aaPredicted RBP11.38□□□□□ -0.59
HDAC1-209ENST00000484305 FTCDNL1E5RQL4 147 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 M0QX08 132 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 RAD51DO75771 328 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 AHSA1O95433 338 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 OPN1SWP03999 348 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 GGT1P19440 569 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 RGS8P57771 180 aaPredicted RBP11.37□□□□□ -0.59
HDAC1-209ENST00000484305 RBBP4Q09028 425 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 FAPQ12884 760 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 OR1Q1Q15612 314 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 DUSP7Q16829 419 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 TRMT5Q32P41 509 aaKnown RBP11.37□□□□□ -0.59
HDAC1-209ENST00000484305 RABL3Q5HYI8 236 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 NCMAPQ5T1S8 102 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 TSPO2Q5TGU0 170 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 TMEM225Q6GV28 225 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 NANOGP8Q6NSW7 305 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 C6orf89Q6UWU4 347 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 GPAT4Q86UL3 456 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 P3H2Q8IVL5 708 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 BHLHE22Q8NFJ8 381 aaPredicted RBP11.37□□□□□ -0.59
HDAC1-209ENST00000484305 MFSD8Q8NHS3 518 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 TAAR8Q969N4 342 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 TMEM45BQ96B21 275 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 SLC25A36Q96CQ1 311 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 LRRC58Q96CX6 371 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 USB1Q9BQ65 265 aaKnown RBP11.37□□□□□ -0.59
HDAC1-209ENST00000484305 TMUB1Q9BVT8 246 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 SF3B5Q9BWJ5 86 aaKnown RBP11.37□□□□□ -0.59
HDAC1-209ENST00000484305 TRIM2Q9C040 744 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 PIF1Q9H611 641 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 NANOGQ9H9S0 305 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 SLC7A10Q9NS82 523 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 BEX4Q9NWD9 120 aaPredicted RBP11.37□□□□□ -0.59
HDAC1-209ENST00000484305 PARPBPQ9NWS1 579 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 MALT1Q9UDY8 824 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 TESQ9UGI8 421 aaKnown RBP11.37□□□□□ -0.59
HDAC1-209ENST00000484305 ACANP16112 2415 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 VPS13CQ709C8 3753 aa11.37□□□□□ -0.59
HDAC1-209ENST00000484305 IGKV1D-42A0A075B6H8 117 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 LOC100653049A0A140TA62 436 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 CIB4A0PJX0 185 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 CCT8L1PA6NM43 557 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 PDLIM1O00151 329 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 FXYD1O00168 92 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 KRT34O76011 436 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 ITGA5P08648 1049 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 CD99P14209 185 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 HOXC12P31275 282 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 MDH1P40925 334 aaKnown RBP11.36□□□□□ -0.59
HDAC1-209ENST00000484305 CYLC2Q14093 348 aaPredicted RBP11.36□□□□□ -0.59
HDAC1-209ENST00000484305 PPA1Q15181 289 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 ALG10BQ5I7T1 473 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 TIMM23BQ5SRD1 257 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 FAM91A1Q658Y4 838 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 REP15Q6BDI9 236 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 ULK3Q6PHR2 472 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 C20orf204Q6ZNR8 217 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 AAED1Q7RTV5 226 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 SNX32Q86XE0 403 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 KRTAP1-3Q8IUG1 177 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 WFDC11Q8NEX6 87 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 GPR32P1Q8NGA4 272 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 LILRB1Q8NHL6 650 aaPredicted RBP11.36□□□□□ -0.59
HDAC1-209ENST00000484305 DNAJA4Q8WW22 397 aaPredicted RBP11.36□□□□□ -0.59
HDAC1-209ENST00000484305 SLC38A4Q969I6 547 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 PIGTQ969N2 578 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 MUCL1Q96DR8 90 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 ZNF317Q96PQ6 595 aaPredicted RBP11.36□□□□□ -0.59
HDAC1-209ENST00000484305 CCL19Q99731 98 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 ESRP2Q9H6T0 727 aaKnown RBP11.36□□□□□ -0.59
HDAC1-209ENST00000484305 C12orf10Q9HB07 376 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 NGBQ9NPG2 151 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 TAS2R16Q9NYV7 291 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 NPAP1Q9NZP6 1156 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 KLHL14Q9P2G3 628 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 SEC14L4Q9UDX3 406 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 SLC13A4Q9UKG4 626 aa11.36□□□□□ -0.59
HDAC1-209ENST00000484305 A0A087WUJ7 227 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 A0A0B4J2E0 115 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 A0A1B0GX12 115 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 A0A1W2PR80 420 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 DPRXA6NFQ7 191 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 OR5H1A6NKK0 313 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 M0R3H8 397 aa11.35□□□□□ -0.59
HDAC1-209ENST00000484305 HS3ST1O14792 307 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms