RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 TMEM99Q8N816 258 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 OR6T1Q8NGN1 323 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 RNF217Q8TC41 542 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 SLC38A4Q969I6 547 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 ZNF775Q96BV0 537 aaPredicted RBP11.44□□□□□ -0.58
COL5A1-206ENST00000465877 SLC47A1Q96FL8 570 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 MCHR1Q99705 422 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 NAA11Q9BSU3 229 aaPredicted RBP11.44□□□□□ -0.58
COL5A1-206ENST00000465877 PTDSS2Q9BVG9 487 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 EFCAB1Q9HAE3 211 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 TMEM27Q9HBJ8 222 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 RASSF1Q9NS23 344 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 SELENONQ9NZV5 590 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 GMPR2Q9P2T1 348 aaKnown RBP11.44□□□□□ -0.58
COL5A1-206ENST00000465877 PRSS50Q9UI38 385 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 SLC9A8Q9Y2E8 581 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 AP3M1Q9Y2T2 418 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 ARL2BPQ9Y2Y0 163 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 NOSIPQ9Y314 301 aaKnown RBP11.44□□□□□ -0.58
COL5A1-206ENST00000465877 FLVCR1Q9Y5Y0 555 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 VPS13CQ709C8 3753 aa11.44□□□□□ -0.58
COL5A1-206ENST00000465877 A0A087WUJ7 227 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 ELOVL7A1L3X0 281 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 CPSF4LA6NMK7 179 aaKnown RBP11.43□□□□□ -0.58
COL5A1-206ENST00000465877 GPR171O14626 319 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 CHP2O43745 196 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 DCTN3O75935 186 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 PTNP21246 168 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 CDH12P55289 794 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 LIPEQ05469 1076 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 POU4F3Q15319 338 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 ENTPD8Q5MY95 495 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 FAM69AQ5T7M9 428 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 FBXW10Q5XX13 1052 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 ZNF613Q6PF04 617 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 CASP12Q6UXS9 341 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 Q6ZT83 130 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 PIGWQ7Z7B1 504 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 CDH24Q86UP0 819 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 CXorf67Q86X51 503 aaPredicted RBP11.43□□□□□ -0.58
COL5A1-206ENST00000465877 RBM45Q8IUH3 476 aaKnown RBP11.43□□□□□ -0.58
COL5A1-206ENST00000465877 SLC15A3Q8IY34 581 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 OR9K2Q8NGE7 335 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 MFSD8Q8NHS3 518 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 ADAMTS16Q8TE57 1224 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 PROX1Q92786 737 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 APH1AQ96BI3 265 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 KTI12Q96EK9 354 aaPredicted RBP11.43□□□□□ -0.58
COL5A1-206ENST00000465877 WFIKKN1Q96NZ8 548 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 HOPXQ9BPY8 73 aaPredicted RBP11.43□□□□□ -0.58
COL5A1-206ENST00000465877 POLDIP3Q9BY77 421 aaKnown RBP11.43□□□□□ -0.58
COL5A1-206ENST00000465877 ACTR6Q9GZN1 396 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 PCDHAC1Q9H158 963 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 ALG2Q9H553 416 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 ZNF226Q9NYT6 803 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 ABCD2Q9UBJ2 740 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 ABCA4P78363 2273 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 CCDC168Q8NDH2 2452 aa11.43□□□□□ -0.58
COL5A1-206ENST00000465877 TRAV36DV7A0A075B6V5 113 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 SIAH2O43255 324 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 PPP3CBP16298 524 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 TNFRSF1BP20333 461 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 COX5AP20674 150 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 CRYGSP22914 178 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 GSK3BP49841 420 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 P2RY4P51582 365 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 SLC17A1Q14916 467 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 CYBRD1Q53TN4 286 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 ANKRD34AQ69YU3 496 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 GPAT4Q86UL3 456 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 TSPYL5Q86VY4 417 aaPredicted RBP11.42□□□□□ -0.58
COL5A1-206ENST00000465877 CARM1Q86X55 608 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 P3H2Q8IVL5 708 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 ZNF100Q8IYN0 542 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 KISS1RQ969F8 398 aaPredicted RBP11.42□□□□□ -0.58
COL5A1-206ENST00000465877 SLC25A36Q96CQ1 311 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 ZC3HAV1LQ96H79 300 aaKnown RBP11.42□□□□□ -0.58
COL5A1-206ENST00000465877 SF3B5Q9BWJ5 86 aaKnown RBP11.42□□□□□ -0.58
COL5A1-206ENST00000465877 OR10A4Q9H209 315 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 C6orf203Q9P0P8 240 aaPredicted RBP11.42□□□□□ -0.58
COL5A1-206ENST00000465877 SEC14L4Q9UDX3 406 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 MALT1Q9UDY8 824 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 BAG5Q9UL15 447 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 GPR52Q9Y2T5 361 aa11.42□□□□□ -0.58
COL5A1-206ENST00000465877 AKAP6Q13023 2319 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 M0R082 166 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 OR2T1O43869 369 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 MRPL33O75394 65 aaKnown RBP11.41□□□□□ -0.58
COL5A1-206ENST00000465877 LYZL6O75951 148 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 CNOT4O95628 575 aaKnown RBP11.41□□□□□ -0.58
COL5A1-206ENST00000465877 ADAP00813 363 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 IFNA14P01570 189 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 IGHV3-9P01782 118 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 HRGP04196 525 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 THBDP07204 575 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 IL32P24001 234 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 NTF4P34130 210 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 PSME3P61289 254 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 P2RY6Q15077 328 aa11.41□□□□□ -0.58
COL5A1-206ENST00000465877 TSC22D1Q15714 1073 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms