RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 CXorf56Q9H5V9 222 aa4.14□□□□□ -1.75
GTF3C3-208ENST00000455546 TIGARQ9NQ88 270 aa4.14□□□□□ -1.75
GTF3C3-208ENST00000455546 ZNF701Q9NV72 531 aaPredicted RBP4.14□□□□□ -1.75
GTF3C3-208ENST00000455546 CISD1Q9NZ45 108 aaKnown RBP4.14□□□□□ -1.75
GTF3C3-208ENST00000455546 KLHL13Q9P2N7 655 aa4.14□□□□□ -1.75
GTF3C3-208ENST00000455546 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.14□□□□□ -1.75
GTF3C3-208ENST00000455546 MID2Q9UJV3 735 aa4.14□□□□□ -1.75
GTF3C3-208ENST00000455546 LIPT1Q9Y234 373 aa4.14□□□□□ -1.75
GTF3C3-208ENST00000455546 RNF115Q9Y4L5 304 aa4.14□□□□□ -1.75
GTF3C3-208ENST00000455546 MAGED1Q9Y5V3 778 aaPredicted RBP4.14□□□□□ -1.75
GTF3C3-208ENST00000455546 V9GYY5 206 aaPredicted RBP4.14□□□□□ -1.75
GTF3C3-208ENST00000455546 A0A1W2PP18 115 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 GJE1A6NN92 205 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 SHISA9B4DS77 424 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 OVOL3O00110 214 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 SMAD9O15198 467 aaKnown RBP4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 TYROBPO43914 113 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 GPRIN2O60269 458 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 EIF4E2O60573 245 aaKnown RBP4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 CYTIPO60759 359 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 SCN2BO60939 215 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 STX11O75558 287 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 RAD51DO75771 328 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 HSPA4LO95757 839 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 CSTAP01040 98 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 IGHV4-39P01824 125 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 UBL4AP11441 157 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 PAX1P15863 534 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 PRPS1L1P21108 318 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 ELK4P28324 431 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 SLC7A1P30825 629 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 IDUAP35475 653 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 PGM1P36871 562 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 RPL3P39023 403 aaKnown RBP4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 ETV4P43268 484 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 OR3A2P47893 321 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 IDH2P48735 452 aaKnown RBP4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 DIO1P49895 249 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 RPS4XP62701 263 aaKnown RBP4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 CD69Q07108 199 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 SPOCK1Q08629 439 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 SELENBP1Q13228 472 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 SKP2Q13309 424 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 TOP3AQ13472 1001 aaPredicted RBP4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 CBFBQ13951 182 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 PPA1Q15181 289 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 CHI3L2Q15782 390 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 ZNF141Q15928 474 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 ADRM1Q16186 407 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 ARHGAP11BQ3KRB8 267 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 C3orf36Q3SXR2 165 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 ZNF672Q499Z4 452 aaPredicted RBP4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 SLC25A53Q5H9E4 307 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 C9orf135Q5VTT2 229 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 TYW3Q6IPR3 259 aaKnown RBP4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 OGFOD2Q6N063 350 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 TMPPEQ6ZT21 453 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 C16orf62Q7Z3J2 963 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 ADGRG3Q86Y34 549 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 GLB1L2Q8IW92 636 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 ZNF100Q8IYN0 542 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 UBE2J2Q8N2K1 259 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 SLC43A2Q8N370 569 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 ZNF433Q8N7K0 673 aaPredicted RBP4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 GLB1L3Q8NCI6 653 aaPredicted RBP4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 PIK3C3Q8NEB9 887 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 TOR1AIP2Q8NFQ8 470 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 OR4A15Q8NGL6 344 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 OR52N5Q8NH56 324 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 ZNF563Q8TA94 476 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 SFXN5Q8TD22 340 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 TRMT61AQ96FX7 289 aaKnown RBP4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 SLC35G5Q96KT7 338 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 TEX37Q96LM6 180 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 REG4Q9BYZ8 158 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 NUF2Q9BZD4 464 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 DPY30Q9C005 99 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 TRIM2Q9C040 744 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 OR11A1Q9GZK7 315 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 OR10A4Q9H209 315 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 ESRP2Q9H6T0 727 aaKnown RBP4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 PPCSQ9HAB8 311 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 BCO1Q9HAY6 547 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 FANCFQ9NPI8 374 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 CTPS2Q9NRF8 586 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 YAE1D1Q9NRH1 226 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 ATAD3AQ9NVI7 634 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 PNPOQ9NVS9 261 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 NPAP1Q9NZP6 1156 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 KLHL9Q9P2J3 617 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 LGALS13Q9UHV8 139 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 PCDHGB4Q9UN71 923 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 B3GALT5Q9Y2C3 310 aa4.13□□□□□ -1.75
GTF3C3-208ENST00000455546 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 RNF103-CHMP3A0A140T963 221 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 PRSS51A0A1B0GVH4 220 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 CIB4A0PJX0 185 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 TMEM72A0PK05 275 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 DUXAA6NLW8 204 aa4.12□□□□□ -1.75
GTF3C3-208ENST00000455546 CCT8L1PA6NM43 557 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms