RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 TCRBV5S2A0A599 114 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 FAM90A27PA6NNH2 459 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 hCG_2039718K7EN88 272 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 ACOT8O14734 319 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 FFAR1O14842 300 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 SS18L1O75177 396 aaPredicted RBP17.13■□□□□ 0.33
HOXA9-202ENST00000396345 SEMG1P04279 462 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 CTBP2P56545 445 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 SIRPAP78324 504 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 H3F3AP84243 136 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 RASGEF1BQ0VAM2 473 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 SLC25A35Q3KQZ1 300 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 FAM69AQ5T7M9 428 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 PAQR6Q6TCH4 344 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 TSEN54Q7Z6J9 526 aaKnown RBP17.13■□□□□ 0.33
HOXA9-202ENST00000396345 NKAIN4Q8IVV8 208 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 OFCC1Q8IZS5 231 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 PIGXQ8TBF5 258 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 ZNF426Q9BUY5 554 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 UCK2Q9BZX2 261 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 TRIM15Q9C019 465 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 NDUFAF4Q9P032 175 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 KLHL9Q9P2J3 617 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 RHCGQ9UBD6 479 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 EMC9Q9Y3B6 208 aa17.13■□□□□ 0.33
HOXA9-202ENST00000396345 SPTAN1Q13813 2472 aaKnown RBP17.13■□□□□ 0.33
HOXA9-202ENST00000396345 USP9YO00507 2555 aaPredicted RBP17.13■□□□□ 0.33
HOXA9-202ENST00000396345 ZNF814B7Z6K7 855 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 FTCDNL1E5RQL4 147 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 TNFSF13O75888 250 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 AKR7A3O95154 331 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 ITGA2P17301 1181 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 RHCEP18577 417 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 GTF2E2P29084 291 aaKnown RBP17.12■□□□□ 0.33
HOXA9-202ENST00000396345 RBM34P42696 430 aaKnown RBP17.12■□□□□ 0.33
HOXA9-202ENST00000396345 KIR2DL2P43627 348 aaPredicted RBP17.12■□□□□ 0.33
HOXA9-202ENST00000396345 VLDLRP98155 873 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 GUSBP1Q15486 140 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 ABLIM2Q6H8Q1 611 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 FAM214BQ7L5A3 538 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 CCDC103Q8IW40 242 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 C10orf53Q8N6V4 93 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 TMEM99Q8N816 258 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 OR6S1Q8NH40 331 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 TMEM255BQ8WV15 326 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 POP5Q969H6 163 aaKnown RBP17.12■□□□□ 0.33
HOXA9-202ENST00000396345 HS6ST2Q96MM7 605 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 ZNF300Q96RE9 604 aaPredicted RBP17.12■□□□□ 0.33
HOXA9-202ENST00000396345 SEPHS2Q99611 448 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 SLC19A3Q9BZV2 496 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 MMADHCQ9H3L0 296 aaPredicted RBP17.12■□□□□ 0.33
HOXA9-202ENST00000396345 GP6Q9HCN6 339 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 KCNJ16Q9NPI9 418 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 DOPEY2Q9Y3R5 2298 aa17.12■□□□□ 0.33
HOXA9-202ENST00000396345 UTP20O75691 2785 aaKnown RBP17.11■□□□□ 0.33
HOXA9-202ENST00000396345 NKX2-6A6NCS4 301 aa17.11■□□□□ 0.33
HOXA9-202ENST00000396345 KPNA4O00629 521 aaPredicted RBP17.11■□□□□ 0.33
HOXA9-202ENST00000396345 PRSS23O95084 383 aa17.11■□□□□ 0.33
HOXA9-202ENST00000396345 FABP3P05413 133 aa17.11■□□□□ 0.33
HOXA9-202ENST00000396345 YES1P07947 543 aa17.11■□□□□ 0.33
HOXA9-202ENST00000396345 FLOT2Q14254 428 aa17.11■□□□□ 0.33
HOXA9-202ENST00000396345 MFSD13AQ14CX5 517 aa17.11■□□□□ 0.33
HOXA9-202ENST00000396345 TRAM2Q15035 370 aa17.11■□□□□ 0.33
HOXA9-202ENST00000396345 TMEM201Q5SNT2 666 aa17.11■□□□□ 0.33
HOXA9-202ENST00000396345 OTUD3Q5T2D3 398 aaPredicted RBP17.11■□□□□ 0.33
HOXA9-202ENST00000396345 VWA1Q6PCB0 445 aa17.11■□□□□ 0.33
HOXA9-202ENST00000396345 TUSC5Q8IXB3 177 aa17.11■□□□□ 0.33
HOXA9-202ENST00000396345 RELL2Q8NC24 303 aaPredicted RBP17.11■□□□□ 0.33
HOXA9-202ENST00000396345 TMEM239Q8WW34 195 aa17.11■□□□□ 0.33
HOXA9-202ENST00000396345 STARD4Q96DR4 205 aa17.11■□□□□ 0.33
HOXA9-202ENST00000396345 PSD2Q9BQI7 771 aa17.11■□□□□ 0.33
HOXA9-202ENST00000396345 TACO1Q9BSH4 297 aaKnown RBP17.11■□□□□ 0.33
HOXA9-202ENST00000396345 PIGMQ9H3S5 423 aa17.11■□□□□ 0.33
HOXA9-202ENST00000396345 C6orf203Q9P0P8 240 aaPredicted RBP17.11■□□□□ 0.33
HOXA9-202ENST00000396345 KLHL13Q9P2N7 655 aa17.11■□□□□ 0.33
HOXA9-202ENST00000396345 SLC7A8Q9UHI5 535 aa17.11■□□□□ 0.33
HOXA9-202ENST00000396345 POMPQ9Y244 141 aa17.11■□□□□ 0.33
HOXA9-202ENST00000396345 CACNA1CQ13936 2221 aa17.11■□□□□ 0.33
HOXA9-202ENST00000396345 A1L4Q6 167 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 AQP7P3A6NL99 342 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 AQP12BA6NM10 295 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 RAMP1O60894 148 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 FZD7O75084 574 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 DIRAS1O95057 198 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 BGLAPP02818 100 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 FUT4P22083 530 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 CBLP22681 906 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 GRPRP30550 384 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 AGTR1P30556 359 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 UGT2B15P54855 530 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 PDK3Q15120 406 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 BTLAQ7Z6A9 289 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 ZDHHC21Q8IVQ6 265 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 AQP12AQ8IXF9 295 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 PIK3C3Q8NEB9 887 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 OR6K3Q8NGY3 331 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 PSMG3-AS1Q96PY0 264 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 PIP5K1AQ99755 562 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 KLHL4Q9C0H6 718 aa17.1■□□□□ 0.33
HOXA9-202ENST00000396345 NMNAT1Q9HAN9 279 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms