RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 RTL4Q6ZR62 310 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 OR5L2Q8NGL0 311 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 NUBPLQ8TB37 319 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 EXOSC1Q9Y3B2 195 aaKnown RBP13.74□□□□□ -0.21
SCAF11-204ENST00000395454 KCNMB2Q9Y691 235 aa13.74□□□□□ -0.21
SCAF11-204ENST00000395454 BSNQ9UPA5 3926 aa13.73□□□□□ -0.21
SCAF11-204ENST00000395454 OR6C70A6NIJ9 312 aa13.73□□□□□ -0.21
SCAF11-204ENST00000395454 WWP2O00308 870 aa13.73□□□□□ -0.21
SCAF11-204ENST00000395454 FADS1O60427 444 aa13.73□□□□□ -0.21
SCAF11-204ENST00000395454 EIF4E2O60573 245 aaKnown RBP13.73□□□□□ -0.21
SCAF11-204ENST00000395454 CH25HO95992 272 aa13.73□□□□□ -0.21
SCAF11-204ENST00000395454 CCL11P51671 97 aa13.73□□□□□ -0.21
SCAF11-204ENST00000395454 NR0B1P51843 470 aaKnown RBP13.73□□□□□ -0.21
SCAF11-204ENST00000395454 CRYZQ08257 329 aaKnown RBP13.73□□□□□ -0.21
SCAF11-204ENST00000395454 PLCXD2Q0VAA5 305 aa13.73□□□□□ -0.21
SCAF11-204ENST00000395454 NIPAL3Q6P499 406 aa13.73□□□□□ -0.21
SCAF11-204ENST00000395454 CBLN3Q6UW01 205 aa13.73□□□□□ -0.21
SCAF11-204ENST00000395454 OAFQ86UD1 273 aa13.73□□□□□ -0.21
SCAF11-204ENST00000395454 PHOSPHO1Q8TCT1 267 aa13.73□□□□□ -0.21
SCAF11-204ENST00000395454 RNF138Q8WVD3 245 aa13.73□□□□□ -0.21
SCAF11-204ENST00000395454 OMA1Q96E52 524 aa13.73□□□□□ -0.21
SCAF11-204ENST00000395454 ZNF649Q9BS31 505 aa13.73□□□□□ -0.21
SCAF11-204ENST00000395454 NDUFB11Q9NX14 153 aa13.73□□□□□ -0.21
SCAF11-204ENST00000395454 MYOTQ9UBF9 498 aa13.73□□□□□ -0.21
SCAF11-204ENST00000395454 IL20RAQ9UHF4 553 aa13.73□□□□□ -0.21
SCAF11-204ENST00000395454 MAP1BP46821 2468 aaKnown RBP13.73□□□□□ -0.21
SCAF11-204ENST00000395454 M0R3G1 203 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 REM1O75628 298 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 SLC2A10O95528 541 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 LIMS3P0CW19 117 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 LIMS4P0CW20 117 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 PEPDP12955 493 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 MYL12AP19105 171 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 IL12BP29460 328 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 SLC6A6P31641 620 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 ETV1P50549 477 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.72□□□□□ -0.21
SCAF11-204ENST00000395454 C1DQ13901 141 aaKnown RBP13.72□□□□□ -0.21
SCAF11-204ENST00000395454 B3GNTL1Q67FW5 361 aaPredicted RBP13.72□□□□□ -0.21
SCAF11-204ENST00000395454 JMJD6Q6NYC1 403 aaPredicted RBP13.72□□□□□ -0.21
SCAF11-204ENST00000395454 GDPGP1Q6ZNW5 385 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 CXXC5Q7LFL8 322 aaKnown RBP13.72□□□□□ -0.21
SCAF11-204ENST00000395454 RNF217Q8TC41 542 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 SGTBQ96EQ0 304 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 GPX7Q96SL4 187 aaPredicted RBP13.72□□□□□ -0.21
SCAF11-204ENST00000395454 RTN4RQ9BZR6 473 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 SLIRPQ9GZT3 109 aaKnown RBP13.72□□□□□ -0.21
SCAF11-204ENST00000395454 ADAM19Q9H013 955 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 ZMIZ1Q9ULJ6 1067 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 A3GALT2U3KPV4 340 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 PMF1-BGLAPU3KQ54 211 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 SPENQ96T58 3664 aaKnown RBP13.72□□□□□ -0.21
SCAF11-204ENST00000395454 TRAV27A0A087WT01 109 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 TMEM200CA6NKL6 621 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 MYL12BO14950 172 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 OR2J2O76002 312 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 SLC1A3P43003 542 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 WNT4P56705 351 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 ZNF117Q03924 483 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 TSTQ16762 297 aaKnown RBP13.72□□□□□ -0.21
SCAF11-204ENST00000395454 DGUOKQ16854 277 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 ZNF829Q3KNS6 432 aaPredicted RBP13.72□□□□□ -0.21
SCAF11-204ENST00000395454 ARHGAP11AQ6P4F7 1023 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 USP43Q70EL4 1123 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 RPS19BP1Q86WX3 136 aaKnown RBP13.72□□□□□ -0.21
SCAF11-204ENST00000395454 CPOQ8IVL8 374 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 BBS1Q8NFJ9 593 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 PSMF1Q92530 271 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 KISS1RQ969F8 398 aaPredicted RBP13.72□□□□□ -0.21
SCAF11-204ENST00000395454 CDCP1Q9H5V8 836 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 CHRNA9Q9UGM1 479 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 CARD8Q9Y2G2 431 aa13.72□□□□□ -0.21
SCAF11-204ENST00000395454 ITGA10O75578 1167 aa13.71□□□□□ -0.21
SCAF11-204ENST00000395454 NDUFB2O95178 105 aa13.71□□□□□ -0.21
SCAF11-204ENST00000395454 TSPAN19P0C672 248 aa13.71□□□□□ -0.21
SCAF11-204ENST00000395454 CPEP16870 476 aa13.71□□□□□ -0.21
SCAF11-204ENST00000395454 SLC2A5P22732 501 aa13.71□□□□□ -0.21
SCAF11-204ENST00000395454 ENTPD1P49961 510 aa13.71□□□□□ -0.21
SCAF11-204ENST00000395454 NRG3P56975 720 aa13.71□□□□□ -0.21
SCAF11-204ENST00000395454 ACSM1Q08AH1 577 aa13.71□□□□□ -0.21
SCAF11-204ENST00000395454 PAQR6Q6TCH4 344 aa13.71□□□□□ -0.21
SCAF11-204ENST00000395454 PRR22Q8IZ63 422 aa13.71□□□□□ -0.21
SCAF11-204ENST00000395454 ZHX1-C8orf76Q96EF9 292 aa13.71□□□□□ -0.21
SCAF11-204ENST00000395454 TNFRSF13CQ96RJ3 184 aa13.71□□□□□ -0.21
SCAF11-204ENST00000395454 IFT27Q9BW83 186 aa13.71□□□□□ -0.21
SCAF11-204ENST00000395454 DCSTAMPQ9H295 470 aa13.71□□□□□ -0.21
SCAF11-204ENST00000395454 PLGRKTQ9HBL7 147 aa13.71□□□□□ -0.21
SCAF11-204ENST00000395454 HAO2Q9NYQ3 351 aa13.71□□□□□ -0.21
SCAF11-204ENST00000395454 TEKT2Q9UIF3 430 aa13.71□□□□□ -0.21
SCAF11-204ENST00000395454 ZNF337Q9Y3M9 751 aa13.71□□□□□ -0.21
SCAF11-204ENST00000395454 NBEAQ8NFP9 2946 aa13.71□□□□□ -0.22
SCAF11-204ENST00000395454 ARPC3O15145 178 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 OR7A10O76100 309 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 HSMCR30P0CW71 290 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 NAGAP17050 411 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 SERPINB10P48595 397 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 CLK1P49759 484 aaKnown RBP13.7□□□□□ -0.22
SCAF11-204ENST00000395454 LSM3P62310 102 aaKnown RBP13.7□□□□□ -0.22
SCAF11-204ENST00000395454 ANKDD1AQ495B1 522 aa13.7□□□□□ -0.22
SCAF11-204ENST00000395454 H3F3CQ6NXT2 135 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms