RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 ZNRF1Q8ND25 227 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 ZNF397Q8NF99 534 aaPredicted RBP4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 OR52B4Q8NGK2 314 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 OR6K2Q8NGY2 324 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 LINC00479Q96M42 142 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 ANKRD27Q96NW4 1050 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 NPY6RQ99463 290 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 NDUFAF3Q9BU61 184 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 STRADBQ9C0K7 418 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 LIME1Q9H400 295 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 NT5DC2Q9H857 520 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 MOB1AQ9H8S9 216 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 ACTR8Q9H981 624 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 EIF3KQ9UBQ5 218 aaKnown RBP4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 PISDQ9UG56 409 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 APOBEC3BQ9UH17 382 aaKnown RBP4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 COL27A1Q8IZC6 1860 aaPredicted RBP4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 TMEM131Q92545 1883 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 DOPEY2Q9Y3R5 2298 aa4.57□□□□□ -1.68
RNU4-39P-201ENST00000362455 TRGV8A0A0C4DH27 118 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 F8WDY8 70 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 K7EM74 188 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 BUB1O43683 1085 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 SCGB2A1O75556 95 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 GUCA1CO95843 209 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 HPRP00739 348 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 RHOCP08134 193 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 RNF224P0DH78 156 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 LIPCP11150 499 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 SLC2A3P11169 496 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 GP9P14770 177 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 ZNF10P21506 573 aaPredicted RBP4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 IL4RP24394 825 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 CCNHP51946 323 aaPredicted RBP4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 MTTPP55157 894 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 C16orf72Q14CZ0 275 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 ZSWIM7Q19AV6 140 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 PTPN20Q4JDL3 420 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 C2CD6Q53TS8 623 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 HSP90AA5PQ58FG0 334 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 ZNF658Q5TYW1 1059 aaPredicted RBP4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 WDR25Q64LD2 544 aaPredicted RBP4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 ZNF613Q6PF04 617 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 NUFIP2Q7Z417 695 aaKnown RBP4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 VPS36Q86VN1 386 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 PYROXD2Q8N2H3 581 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 BCORP1Q8N888 145 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 ZNF781Q8N8C0 355 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 Q8N9G6 341 aaPredicted RBP4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 CCL4L1Q8NHW4 92 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 SELENOMQ8WWX9 145 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 NAT6Q93015 286 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 NCLNQ969V3 563 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 MOCOSQ96EN8 888 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 TM6SF2Q9BZW4 377 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 DPH5Q9H2P9 285 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 LRRN3Q9H3W5 708 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 Q9HAA7 133 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 YAE1D1Q9NRH1 226 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 IKZF3Q9UKT9 509 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 CFAP45Q9UL16 551 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 ZNF490Q9ULM2 529 aaPredicted RBP4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 NEU3Q9UQ49 428 aa4.56□□□□□ -1.68
RNU4-39P-201ENST00000362455 ABCA12Q86UK0 2595 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 IGLV4-3A0A075B6K6 122 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 LGALS8O00214 317 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 CFLARO15519 480 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 DIRAS3O95661 229 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 IGHG1P01857 330 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 UGT2B4P06133 528 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 OR9G9P0C7N8 305 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 PNMA6AP0CW24 399 aaPredicted RBP4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 OR1E1P30953 314 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 NAAAQ02083 359 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 GNA12Q03113 381 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 LRRC63Q05C16 580 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 SCGB2A2Q13296 93 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 EIF3IQ13347 325 aaKnown RBP4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 IRF4Q15306 451 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 KLHL40Q2TBA0 621 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 GOLGA7Q7Z5G4 137 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 SETD3Q86TU7 594 aaPredicted RBP4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 C17orf82Q86X59 251 aaPredicted RBP4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 LMNTD2Q8IXW0 634 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 DENND6BQ8NEG7 585 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 OR1B1Q8NGR6 318 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 ZNF564Q8TBZ8 553 aaPredicted RBP4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 CHPT1Q8WUD6 406 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 OR1E3Q8WZA6 343 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 ISG20Q96AZ6 181 aaKnown RBP4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 PDXPQ96GD0 296 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 SLC45A3Q96JT2 553 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 C18orf12Q96KH6 178 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 AGAP3Q96P47 875 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 CRACR2AQ9BSW2 395 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 WRAP53Q9BUR4 548 aaKnown RBP4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 RAB11FIP5Q9BXF6 653 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 SYNDIG1Q9H7V2 258 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 RDH14Q9HBH5 336 aa4.55□□□□□ -1.68
RNU4-39P-201ENST00000362455 NRN1Q9NPD7 142 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms