RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 TIGD2Q4W5G0 525 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 TNFAIP8L3Q5GJ75 292 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 CEP85LQ5SZL2 805 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 C3orf33Q6P1S2 294 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 CLECL1Q8IZS7 167 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 C17orf78Q8N4C9 275 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 OR4A15Q8NGL6 344 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 MIPOL1Q8TD10 442 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 TESCQ96BS2 214 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 SORT1Q99523 831 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 SUCNR1Q9BXA5 334 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 SERINC1Q9NRX5 453 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 HAO1Q9UJM8 370 aa13.75□□□□□ -0.21
DDX55-202ENST00000354291 LOC105371242A0A075B767 164 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 IGHV1-18A0A0C4DH31 117 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 RNF103-CHMP3A0A140T963 221 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 ZNF716A6NP11 495 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 hCG_2039718K7EN88 272 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 GPR171O14626 319 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 CRYAAP02489 173 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 MSMBP08118 114 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 ARAFP10398 606 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 TFPIP10646 304 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 LBPP18428 481 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 BGNP21810 368 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 UQCRC2P22695 453 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 CLNS1AP54105 237 aaKnown RBP13.74□□□□□ -0.21
DDX55-202ENST00000354291 RPS26P62854 115 aaKnown RBP13.74□□□□□ -0.21
DDX55-202ENST00000354291 GPR68Q15743 365 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 SLC25A53Q5H9E4 307 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 PDZK1Q5T2W1 519 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 ATAD3BQ5T9A4 648 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 ABLIM2Q6H8Q1 611 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 CASP12Q6UXS9 341 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 C16orf62Q7Z3J2 963 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 CCDC103Q8IW40 242 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 C1orf162Q8NEQ5 155 aaPredicted RBP13.74□□□□□ -0.21
DDX55-202ENST00000354291 OIT3Q8WWZ8 545 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 SLC35G5Q96KT7 338 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 NUF2Q9BZD4 464 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 LAT2Q9GZY6 243 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 ESM1Q9NQ30 184 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 DCTN4Q9UJW0 460 aa13.74□□□□□ -0.21
DDX55-202ENST00000354291 PDLIM1O00151 329 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 ETV2O00321 342 aaPredicted RBP13.73□□□□□ -0.21
DDX55-202ENST00000354291 FCMRO60667 390 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 SCN2BO60939 215 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 PDE5AO76074 875 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 BCL10O95999 233 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 CSTAP01040 98 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 GUSBP08236 651 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 IL1RL1Q01638 556 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 MPP2Q14168 576 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 ADRM1Q16186 407 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 HIKESHIQ53FT3 197 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 AP1ARQ63HQ0 302 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 EIF3MQ7L2H7 374 aaKnown RBP13.73□□□□□ -0.21
DDX55-202ENST00000354291 CLEC4FQ8N1N0 589 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 CLDND2Q8NHS1 167 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 XAGE5Q8WWM1 108 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 ZHX1-C8orf76Q96EF9 292 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 SLC38A2Q96QD8 506 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 SLC6A7Q99884 636 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 PAIP2Q9BPZ3 127 aaKnown RBP13.73□□□□□ -0.21
DDX55-202ENST00000354291 ZNF350Q9GZX5 532 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 OR51I1Q9H343 314 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 SERHL2Q9H4I8 314 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 MEAF6Q9HAF1 191 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 POLE3Q9NRF9 147 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 SLC7A10Q9NS82 523 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 TREM2Q9NZC2 230 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 MKLN1Q9UL63 735 aa13.73□□□□□ -0.21
DDX55-202ENST00000354291 VSTM5A8MXK1 200 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 ESPNB1AK53 854 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 ANKRD28O15084 1053 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 DNAJA2O60884 412 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 UGT2B17O75795 530 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 CYP7B1O75881 506 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 CPSF4O95639 269 aaKnown RBP13.72□□□□□ -0.21
DDX55-202ENST00000354291 ZFP36P26651 326 aaKnown RBP13.72□□□□□ -0.21
DDX55-202ENST00000354291 MERTKQ12866 999 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 SKP2Q13309 424 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 CASP8Q14790 479 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 HHATQ5VTY9 493 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 OGFOD2Q6N063 350 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 C1orf229Q6ZS94 237 aaPredicted RBP13.72□□□□□ -0.21
DDX55-202ENST00000354291 SPATA21Q7Z572 469 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 ANKRD46Q86W74 232 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 CARM1Q86X55 608 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 ZDHHC22Q8N966 263 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 PIGXQ8TBF5 258 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 TMEM234Q8WY98 164 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 ST8SIA1Q92185 356 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 DOK1Q99704 481 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 THUMPD3Q9BV44 507 aaKnown RBP13.72□□□□□ -0.21
DDX55-202ENST00000354291 DYNLRB1Q9NP97 96 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 DDX28Q9NUL7 540 aaKnown RBP13.72□□□□□ -0.21
DDX55-202ENST00000354291 ARMCX1Q9P291 453 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 KCNE5Q9UJ90 142 aa13.72□□□□□ -0.21
DDX55-202ENST00000354291 FBXO9Q9UK97 447 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms