RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SH3GLB1Q9Y371 365 aa17.05■□□□□ 0.32
SYNE4-202ENST00000340477 TESMINQ9Y4I5 508 aa17.05■□□□□ 0.32
SYNE4-202ENST00000340477 TRAV36DV7A0A075B6V5 113 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 AQP7P3A6NL99 342 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 CPSF4LA6NMK7 179 aaKnown RBP17.04■□□□□ 0.32
SYNE4-202ENST00000340477 ZNF716A6NP11 495 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 NME4O00746 187 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 NPIPB7O75200 414 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 MRPL33O75394 65 aaKnown RBP17.04■□□□□ 0.32
SYNE4-202ENST00000340477 GMNNO75496 209 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 AKR7A3O95154 331 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 IL32P24001 234 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 KDELR2P33947 212 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 MNAT1P51948 309 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 MXRA7P84157 204 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 MFSD13AQ14CX5 517 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 CYBRD1Q53TN4 286 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 ENTPD8Q5MY95 495 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 FAM69AQ5T7M9 428 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 TMEM225Q6GV28 225 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 GPAT4Q86UL3 456 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 CARM1Q86X55 608 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 UBE2J2Q8N2K1 259 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 CCDC197Q8NCU1 140 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 STEAP2Q8NFT2 490 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 TPD52L3Q96J77 140 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 LURAP1Q96LR2 239 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 SF3B5Q9BWJ5 86 aaKnown RBP17.04■□□□□ 0.32
SYNE4-202ENST00000340477 PRR14Q9BWN1 585 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 HDHD5Q9BXW7 423 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 ADA2Q9NZK5 511 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 ING1Q9UK53 422 aaPredicted RBP17.04■□□□□ 0.32
SYNE4-202ENST00000340477 GPR52Q9Y2T5 361 aa17.04■□□□□ 0.32
SYNE4-202ENST00000340477 A0A087WUJ7 227 aa17.03■□□□□ 0.32
SYNE4-202ENST00000340477 TRAPPC13A5PLN9 417 aa17.03■□□□□ 0.32
SYNE4-202ENST00000340477 CXCR6O00574 342 aa17.03■□□□□ 0.32
SYNE4-202ENST00000340477 CHP2O43745 196 aa17.03■□□□□ 0.32
SYNE4-202ENST00000340477 CNOT4O95628 575 aaKnown RBP17.03■□□□□ 0.32
SYNE4-202ENST00000340477 IFNA8P32881 189 aa17.03■□□□□ 0.32
SYNE4-202ENST00000340477 GSK3BP49841 420 aa17.03■□□□□ 0.32
SYNE4-202ENST00000340477 CDH12P55289 794 aa17.03■□□□□ 0.32
SYNE4-202ENST00000340477 DAZAP2Q15038 168 aaPredicted RBP17.03■□□□□ 0.32
SYNE4-202ENST00000340477 P2RY6Q15077 328 aa17.03■□□□□ 0.32
SYNE4-202ENST00000340477 C8orf82Q6P1X6 216 aaPredicted RBP17.03■□□□□ 0.32
SYNE4-202ENST00000340477 CASP12Q6UXS9 341 aa17.03■□□□□ 0.32
SYNE4-202ENST00000340477 DEF8Q6ZN54 512 aa17.03■□□□□ 0.32
SYNE4-202ENST00000340477 Q6ZT83 130 aa17.03■□□□□ 0.32
SYNE4-202ENST00000340477 C10orf53Q8N6V4 93 aa17.03■□□□□ 0.32
SYNE4-202ENST00000340477 TMEM99Q8N816 258 aa17.03■□□□□ 0.32
SYNE4-202ENST00000340477 KTI12Q96EK9 354 aaPredicted RBP17.03■□□□□ 0.32
SYNE4-202ENST00000340477 TMEM43Q9BTV4 400 aa17.03■□□□□ 0.32
SYNE4-202ENST00000340477 POLDIP3Q9BY77 421 aaKnown RBP17.03■□□□□ 0.32
SYNE4-202ENST00000340477 POLR2J2Q9GZM3 115 aaKnown RBP17.03■□□□□ 0.32
SYNE4-202ENST00000340477 POLR2J3Q9H1A7 115 aaKnown RBP17.03■□□□□ 0.32
SYNE4-202ENST00000340477 OR10A4Q9H209 315 aa17.03■□□□□ 0.32
SYNE4-202ENST00000340477 RASD1Q9Y272 281 aa17.03■□□□□ 0.32
SYNE4-202ENST00000340477 ZNF814B7Z6K7 855 aa17.02■□□□□ 0.32
SYNE4-202ENST00000340477 PSMB1P20618 241 aaKnown RBP17.02■□□□□ 0.32
SYNE4-202ENST00000340477 CCKARP32238 428 aa17.02■□□□□ 0.32
SYNE4-202ENST00000340477 TAS2R41P59536 307 aa17.02■□□□□ 0.32
SYNE4-202ENST00000340477 IL1RL1Q01638 556 aa17.02■□□□□ 0.32
SYNE4-202ENST00000340477 SLC17A1Q14916 467 aa17.02■□□□□ 0.32
SYNE4-202ENST00000340477 NPTX1Q15818 432 aa17.02■□□□□ 0.32
SYNE4-202ENST00000340477 STAC2Q6ZMT1 411 aa17.02■□□□□ 0.32
SYNE4-202ENST00000340477 CXorf67Q86X51 503 aaPredicted RBP17.02■□□□□ 0.32
SYNE4-202ENST00000340477 OR9K2Q8NGE7 335 aa17.02■□□□□ 0.32
SYNE4-202ENST00000340477 ADAMTS16Q8TE57 1224 aa17.02■□□□□ 0.32
SYNE4-202ENST00000340477 KISS1RQ969F8 398 aaPredicted RBP17.02■□□□□ 0.32
SYNE4-202ENST00000340477 FAM162AQ96A26 154 aa17.02■□□□□ 0.32
SYNE4-202ENST00000340477 MPP4Q96JB8 637 aa17.02■□□□□ 0.32
SYNE4-202ENST00000340477 USB1Q9BQ65 265 aaKnown RBP17.02■□□□□ 0.32
SYNE4-202ENST00000340477 WFDC6Q9BQY6 131 aa17.02■□□□□ 0.32
SYNE4-202ENST00000340477 ASPNQ9BXN1 380 aa17.02■□□□□ 0.32
SYNE4-202ENST00000340477 ACTR6Q9GZN1 396 aa17.02■□□□□ 0.32
SYNE4-202ENST00000340477 PCDHAC1Q9H158 963 aa17.02■□□□□ 0.32
SYNE4-202ENST00000340477 CLEC4MQ9H2X3 399 aaPredicted RBP17.02■□□□□ 0.32
SYNE4-202ENST00000340477 ABCD2Q9UBJ2 740 aa17.02■□□□□ 0.32
SYNE4-202ENST00000340477 CORINQ9Y5Q5 1042 aa17.02■□□□□ 0.32
SYNE4-202ENST00000340477 APCP25054 2843 aa17.02■□□□□ 0.31
SYNE4-202ENST00000340477 TPST2O60704 377 aa17.01■□□□□ 0.31
SYNE4-202ENST00000340477 RAMP1O60894 148 aa17.01■□□□□ 0.31
SYNE4-202ENST00000340477 SHOX2O60902 331 aaPredicted RBP17.01■□□□□ 0.31
SYNE4-202ENST00000340477 CTAG2O75638 210 aa17.01■□□□□ 0.31
SYNE4-202ENST00000340477 ZNF682O95780 498 aa17.01■□□□□ 0.31
SYNE4-202ENST00000340477 ADAP00813 363 aa17.01■□□□□ 0.31
SYNE4-202ENST00000340477 CRYBA2P53672 197 aa17.01■□□□□ 0.31
SYNE4-202ENST00000340477 EGR4Q05215 589 aa17.01■□□□□ 0.31
SYNE4-202ENST00000340477 TTC33Q6PID6 262 aaPredicted RBP17.01■□□□□ 0.31
SYNE4-202ENST00000340477 C16orf89Q6UX73 402 aa17.01■□□□□ 0.31
SYNE4-202ENST00000340477 RBM45Q8IUH3 476 aaKnown RBP17.01■□□□□ 0.31
SYNE4-202ENST00000340477 GABRG1Q8N1C3 465 aa17.01■□□□□ 0.31
SYNE4-202ENST00000340477 OR6S1Q8NH40 331 aa17.01■□□□□ 0.31
SYNE4-202ENST00000340477 ZC3HAV1LQ96H79 300 aaKnown RBP17.01■□□□□ 0.31
SYNE4-202ENST00000340477 WFIKKN1Q96NZ8 548 aa17.01■□□□□ 0.31
SYNE4-202ENST00000340477 PTDSS2Q9BVG9 487 aa17.01■□□□□ 0.31
SYNE4-202ENST00000340477 RASSF1Q9NS23 344 aa17.01■□□□□ 0.31
SYNE4-202ENST00000340477 UPB1Q9UBR1 384 aa17.01■□□□□ 0.31
SYNE4-202ENST00000340477 PRSS50Q9UI38 385 aa17.01■□□□□ 0.31
SYNE4-202ENST00000340477 ADAM21Q9UKJ8 722 aa17.01■□□□□ 0.31
SYNE4-202ENST00000340477 SLC7A7Q9UM01 511 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms