RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 ZNF141Q15928 474 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 ZSWIM7Q19AV6 140 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 SLC35D3Q5M8T2 416 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 ELFN2Q5R3F8 820 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 ZNF684Q5T5D7 378 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 DPY19L2P2Q6ZN68 376 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 YAF2Q8IY57 180 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 EID2Q8N6I1 236 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 BEST4Q8NFU0 473 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 OR52R1Q8NGF1 315 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 OR51L1Q8NGJ5 315 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 OR10G6Q8NH81 332 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 ZNF671Q8TAW3 534 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 SNX33Q8WV41 574 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 TSACCQ96A04 125 aaPredicted RBP7.98□□□□□ -1.13
CLK1-201ENST00000321356 DERL3Q96Q80 235 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 PDCD1LG2Q9BQ51 273 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 FBRSQ9HAH7 460 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 NOX4Q9NPH5 578 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 C2orf42Q9NWW7 574 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 GLTPQ9NZD2 209 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 GNG8Q9UK08 70 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 NUP210LQ5VU65 1888 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 A0A1B0GUH1 482 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 A0A1W2PQF6 199 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 OR6C68A6NDL8 312 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 NAP1L6A6NFF2 107 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 IFITM5A6NNB3 132 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.98□□□□□ -1.13
CLK1-201ENST00000321356 GABARAPH6UMI1 98 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 TNFRSF10CO14798 259 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 GMDSO60547 372 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 SELENOFO60613 162 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 PVRP15151 417 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 SPI1P17947 270 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 PSMB1P20618 241 aaKnown RBP7.98□□□□□ -1.13
CLK1-201ENST00000321356 DNASE1P24855 282 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 GPR143P51810 404 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 RAB38P57729 211 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 SRP54P61011 504 aaKnown RBP7.98□□□□□ -1.13
CLK1-201ENST00000321356 RPL6Q02878 288 aaKnown RBP7.98□□□□□ -1.13
CLK1-201ENST00000321356 RIPPLY1Q0D2K3 151 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 ILF3Q12906 894 aaKnown RBP eCLIP7.98□□□□□ -1.131e-7■■■■■ 26.8
CLK1-201ENST00000321356 GPM6BQ13491 265 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 FAM53BQ14153 422 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 TMEM255AQ5JRV8 349 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 CLLU1Q5K131 121 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 MTFR2Q6P444 385 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 ZNF550Q7Z398 422 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 RD3Q7Z3Z2 195 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 IZUMO1Q8IYV9 350 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 ARHGEF39Q8N4T4 335 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 ZNF614Q8N883 585 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 FAM71CQ8NEG0 241 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 RGP1Q92546 391 aaPredicted RBP7.98□□□□□ -1.13
CLK1-201ENST00000321356 SGTBQ96EQ0 304 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 MRPL48Q96GC5 212 aaKnown RBP7.98□□□□□ -1.13
CLK1-201ENST00000321356 BMFQ96LC9 184 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 VSTM2LQ96N03 204 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 GPX7Q96SL4 187 aaPredicted RBP7.98□□□□□ -1.13
CLK1-201ENST00000321356 KXD1Q9BQD3 176 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 ZNF436Q9C0F3 470 aaPredicted RBP7.98□□□□□ -1.13
CLK1-201ENST00000321356 HRASLSQ9HDD0 168 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 MKKSQ9NPJ1 570 aaPredicted RBP7.98□□□□□ -1.13
CLK1-201ENST00000321356 NPDC1Q9NQX5 325 aaPredicted RBP7.98□□□□□ -1.13
CLK1-201ENST00000321356 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.98□□□□□ -1.13
CLK1-201ENST00000321356 AKAP7Q9P0M2 348 aaPredicted RBP7.98□□□□□ -1.13
CLK1-201ENST00000321356 RPS6KB2Q9UBS0 482 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 RCE1Q9Y256 329 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 CA5BQ9Y2D0 317 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 ADAM18Q9Y3Q7 739 aa7.98□□□□□ -1.13
CLK1-201ENST00000321356 A0A087WUJ7 227 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 FAM221BA6H8Z2 402 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 EFCAB7A8K855 629 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 C2orf74A8MZ97 194 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 MEN1O00255 615 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 PDCD5O14737 125 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 SULT1B1O43704 296 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 SSNA1O43805 119 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 PPM1BO75688 479 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 ECDO95905 644 aaPredicted RBP7.97□□□□□ -1.13
CLK1-201ENST00000321356 IFNA7P01567 189 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 COL9A1P20849 921 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 GDI1P31150 447 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 PSMB10P40306 273 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 MNDAP41218 407 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 PTH2RP49190 550 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 SELENOPP49908 381 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 DHODHQ02127 395 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 PUDPQ08623 228 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 SNTA1Q13424 505 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 EXOSC2Q13868 293 aaKnown RBP7.97□□□□□ -1.13
CLK1-201ENST00000321356 LINC01590Q5TEZ4 76 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 OLFML2AQ68BL7 652 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 ZC3H14Q6PJT7 736 aaKnown RBP7.97□□□□□ -1.13
CLK1-201ENST00000321356 LINGO2Q7L985 606 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 NLRC3Q7RTR2 1065 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 OR8H3Q8N146 312 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 CSNK1A1LQ8N752 337 aa7.97□□□□□ -1.13
CLK1-201ENST00000321356 OR4N2Q8NGD1 307 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms