RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 CCL26Q9Y258 94 aa12.33□□□□□ -0.44
COL1A1-201ENST00000225964 OR5K3A6NET4 321 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 LRRC30A6NM36 301 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 PRAMEF4O60810 478 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 GRPP07492 148 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 DPP4P27487 766 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 BIDP55957 195 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 SLC9A3R2Q15599 337 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 MISPQ8IVT2 679 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 DEDD2Q8WXF8 326 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 ACOT11Q8WXI4 607 aaPredicted RBP12.32□□□□□ -0.44
COL1A1-201ENST00000225964 ATP13A2Q9NQ11 1180 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 WDR37Q9Y2I8 494 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 NAP1L6A6NFF2 107 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 TAS2R46P59540 309 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 BAXQ07812 192 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 CYS1Q717R9 158 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 OR4M1Q8NGD0 313 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 ANKRD9Q96BM1 317 aaPredicted RBP12.32□□□□□ -0.44
COL1A1-201ENST00000225964 HYLS1Q96M11 299 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 TMEM59Q9BXS4 323 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 SEMA6CQ9H3T2 930 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 ATG4BQ9Y4P1 393 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 ASB4Q9Y574 426 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 PENKP01210 267 aaPredicted RBP12.32□□□□□ -0.44
COL1A1-201ENST00000225964 NKX2-5P52952 324 aaPredicted RBP12.32□□□□□ -0.44
COL1A1-201ENST00000225964 GK3PQ14409 553 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 PROX2Q3B8N5 592 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 RNLSQ5VYX0 342 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 ESPNLQ6ZVH7 1005 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 OR5M1Q8NGP8 315 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 BRIX1Q8TDN6 353 aaKnown RBP12.32□□□□□ -0.44
COL1A1-201ENST00000225964 ELMOD3Q96FG2 381 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 DCAF13Q9NV06 445 aaKnown RBP12.32□□□□□ -0.44
COL1A1-201ENST00000225964 GPATCH2Q9NW75 528 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 FBXO7Q9Y3I1 522 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 ZNF814B7Z6K7 855 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 DPM1O60762 260 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 VEZF1Q14119 521 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 PLEKHM1Q9Y4G2 1056 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 TSPAN11A1L157 253 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 C17orf112F2Z3M2 114 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 HSD17B6O14756 317 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 TPT1P13693 172 aaKnown RBP12.32□□□□□ -0.44
COL1A1-201ENST00000225964 NFYBP25208 207 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 KCNJ10P78508 379 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 SLC14A2Q15849 920 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 SLC35F3Q8IY50 421 aa12.32□□□□□ -0.44
COL1A1-201ENST00000225964 CNOT11Q9UKZ1 510 aaKnown RBP12.32□□□□□ -0.44
COL1A1-201ENST00000225964 RPS17P08708 135 aaKnown RBP12.31□□□□□ -0.44
COL1A1-201ENST00000225964 ANXA7P20073 488 aaKnown RBP12.31□□□□□ -0.44
COL1A1-201ENST00000225964 PRKACBP22694 351 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 NPBWR1P48145 328 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 GNB1P62873 340 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 CXADRP78310 365 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 RAB40BQ12829 278 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 LTB4RQ15722 352 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 SLC35D2Q76EJ3 337 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 SPARTQ8N0X7 666 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 VIRMAQ69YN4 1812 aaKnown RBP12.31□□□□□ -0.44
COL1A1-201ENST00000225964 FANCGO15287 622 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 ABHD16AO95870 558 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 SHEQ5VZ18 495 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 OR51E2Q9H255 320 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 NXT1Q9UKK6 140 aaKnown RBP12.31□□□□□ -0.44
COL1A1-201ENST00000225964 TMED7-TICAM2A0A0A6YYA0 188 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 GFRA2O00451 464 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 ZNF749O43361 778 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 OLFM2O95897 454 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 IL1AP01583 271 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 C6orf15Q6UXA7 325 aaPredicted RBP12.31□□□□□ -0.44
COL1A1-201ENST00000225964 OR4F15Q8NGB8 312 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 MFRPQ9BY79 579 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 ZNF696Q9H7X3 374 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 TUBG2Q9NRH3 451 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 ENPP5Q9UJA9 477 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 TMED7Q9Y3B3 224 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 MBLAC1A4D2B0 266 aaPredicted RBP12.31□□□□□ -0.44
COL1A1-201ENST00000225964 C1orf196B1AJZ1 125 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 FGF4P08620 206 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 GSK3AP49840 483 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 GNB2P62879 340 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 C17orf67Q0P5P2 114 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 EDDM3AQ14507 147 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 ZNF784Q8NCA9 323 aaPredicted RBP12.31□□□□□ -0.44
COL1A1-201ENST00000225964 SHISA4Q96DD7 197 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 RBMXL1Q96E39 390 aaKnown RBP12.31□□□□□ -0.44
COL1A1-201ENST00000225964 ZNF419Q96HQ0 510 aaPredicted RBP12.31□□□□□ -0.44
COL1A1-201ENST00000225964 MYH15Q9Y2K3 1946 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 MYO10Q9HD67 2058 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 SIGLEC1Q9BZZ2 1709 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 CNIH1O95406 144 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 CPT2P23786 658 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 RIPPLY1Q0D2K3 151 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 FAM83HQ6ZRV2 1179 aaPredicted RBP12.31□□□□□ -0.44
COL1A1-201ENST00000225964 MUL1Q969V5 352 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 ELF4Q99607 663 aaPredicted RBP12.31□□□□□ -0.44
COL1A1-201ENST00000225964 SLC30A3Q99726 388 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 SLC38A1Q9H2H9 487 aa12.31□□□□□ -0.44
COL1A1-201ENST00000225964 SLC22A7Q9Y694 548 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms