RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 POLA2Q14181 598 aa18.43■□□□□ 0.54
LINC02228-204ENST00000642115 SMARCE1Q969G3 411 aa18.43■□□□□ 0.54
LINC02228-204ENST00000642115 BOLA2Q9H3K6 86 aa18.43■□□□□ 0.54
LINC02228-204ENST00000642115 ZSWIM6Q9HCJ5 1215 aa18.43■□□□□ 0.54
LINC02228-204ENST00000642115 ECHDC1Q9NTX5 307 aa18.43■□□□□ 0.54
LINC02228-204ENST00000642115 DHX16O60231 1041 aaKnown RBP18.43■□□□□ 0.54
LINC02228-204ENST00000642115 ZCCHC17Q9NP64 241 aaKnown RBP18.43■□□□□ 0.54
LINC02228-204ENST00000642115 CCDC9Q9Y3X0 531 aaKnown RBP18.43■□□□□ 0.54
LINC02228-204ENST00000642115 USP16Q9Y5T5 823 aa18.43■□□□□ 0.54
LINC02228-204ENST00000642115 RIMS1Q86UR5 1692 aaKnown RBP18.43■□□□□ 0.54
LINC02228-204ENST00000642115 NMIQ13287 307 aaPredicted RBP18.42■□□□□ 0.54
LINC02228-204ENST00000642115 MUM1L1Q5H9M0 696 aa18.42■□□□□ 0.54
LINC02228-204ENST00000642115 TEX35Q5T0J7 233 aa18.42■□□□□ 0.54
LINC02228-204ENST00000642115 RNF20Q5VTR2 975 aa18.42■□□□□ 0.54
LINC02228-204ENST00000642115 FILIP1Q7Z7B0 1213 aa18.42■□□□□ 0.54
LINC02228-204ENST00000642115 CCDC69A6NI79 296 aa18.42■□□□□ 0.54
LINC02228-204ENST00000642115 MYO1CO00159 1063 aa18.42■□□□□ 0.54
LINC02228-204ENST00000642115 NR1I2O75469 434 aa18.42■□□□□ 0.54
LINC02228-204ENST00000642115 CCZ1BP86790 482 aa18.42■□□□□ 0.54
LINC02228-204ENST00000642115 CCZ1P86791 482 aaPredicted RBP18.42■□□□□ 0.54
LINC02228-204ENST00000642115 LGR6Q9HBX8 967 aa18.42■□□□□ 0.54
LINC02228-204ENST00000642115 DLC1Q96QB1 1528 aa18.42■□□□□ 0.54
LINC02228-204ENST00000642115 ARHGAP29Q52LW3 1261 aa18.42■□□□□ 0.54
LINC02228-204ENST00000642115 TXLNBQ8N3L3 684 aa18.42■□□□□ 0.54
LINC02228-204ENST00000642115 FLT4P35916 1363 aa18.41■□□□□ 0.54
LINC02228-204ENST00000642115 BLOC1S2Q6QNY1 142 aa18.41■□□□□ 0.54
LINC02228-204ENST00000642115 ARHGEF10O15013 1369 aa18.41■□□□□ 0.54
LINC02228-204ENST00000642115 CWF19L2Q2TBE0 894 aaKnown RBP18.41■□□□□ 0.54
LINC02228-204ENST00000642115 GPATCH3Q96I76 525 aa18.41■□□□□ 0.54
LINC02228-204ENST00000642115 FSD1Q9BTV5 496 aa18.41■□□□□ 0.54
LINC02228-204ENST00000642115 CDC25BP30305 580 aa18.4■□□□□ 0.54
LINC02228-204ENST00000642115 AIMP1Q12904 312 aaKnown RBP18.4■□□□□ 0.54
LINC02228-204ENST00000642115 HSP90AB4PQ58FF6 505 aa18.4■□□□□ 0.54
LINC02228-204ENST00000642115 JAK2O60674 1132 aa18.4■□□□□ 0.54
LINC02228-204ENST00000642115 ZRANB2O95218 330 aaKnown RBP eCLIP18.4■□□□□ 0.54
LINC02228-204ENST00000642115 EDC3Q96F86 508 aaKnown RBP18.4■□□□□ 0.54
LINC02228-204ENST00000642115 HSP90B1P14625 803 aaKnown RBP18.39■□□□□ 0.54
LINC02228-204ENST00000642115 HDGFP51858 240 aaKnown RBP18.39■□□□□ 0.54
LINC02228-204ENST00000642115 BEND3Q5T5X7 828 aa18.39■□□□□ 0.54
LINC02228-204ENST00000642115 CCDC191Q8NCU4 936 aa18.39■□□□□ 0.54
LINC02228-204ENST00000642115 LRRC2Q9BYS8 371 aa18.39■□□□□ 0.54
LINC02228-204ENST00000642115 L2HGDHQ9H9P8 463 aa18.39■□□□□ 0.54
LINC02228-204ENST00000642115 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.39■□□□□ 0.54
LINC02228-204ENST00000642115 NEMFO60524 1076 aa18.39■□□□□ 0.53
LINC02228-204ENST00000642115 NECTIN1Q15223 517 aa18.39■□□□□ 0.53
LINC02228-204ENST00000642115 ZSCAN26Q16670 478 aa18.39■□□□□ 0.53
LINC02228-204ENST00000642115 KLHDC4Q8TBB5 520 aa18.39■□□□□ 0.53
LINC02228-204ENST00000642115 IGSF1Q8N6C5 1336 aa18.39■□□□□ 0.53
LINC02228-204ENST00000642115 PLEKHG3A1L390 1219 aa18.39■□□□□ 0.53
LINC02228-204ENST00000642115 SLC27A2O14975 620 aa18.39■□□□□ 0.53
LINC02228-204ENST00000642115 ERCC4Q92889 916 aaPredicted RBP18.39■□□□□ 0.53
LINC02228-204ENST00000642115 YY1AP1Q9H869 796 aa18.39■□□□□ 0.53
LINC02228-204ENST00000642115 NDUFB9Q9Y6M9 179 aa18.39■□□□□ 0.53
LINC02228-204ENST00000642115 OVOS2A0A0J9YW53 1432 aa18.38■□□□□ 0.53
LINC02228-204ENST00000642115 USP6P35125 1406 aa18.38■□□□□ 0.53
LINC02228-204ENST00000642115 OVOS2Q6IE36 1432 aa18.38■□□□□ 0.53
LINC02228-204ENST00000642115 H3BQV1 296 aa18.38■□□□□ 0.53
LINC02228-204ENST00000642115 EPB41L2O43491 1005 aaKnown RBP18.38■□□□□ 0.53
LINC02228-204ENST00000642115 TPM4P67936 248 aa18.38■□□□□ 0.53
LINC02228-204ENST00000642115 IFFO2Q5TF58 517 aa18.38■□□□□ 0.53
LINC02228-204ENST00000642115 LEO1Q8WVC0 666 aaPredicted RBP18.38■□□□□ 0.53
LINC02228-204ENST00000642115 CLSTN2Q9H4D0 955 aa18.38■□□□□ 0.53
LINC02228-204ENST00000642115 TLR7Q9NYK1 1049 aaKnown RBP18.38■□□□□ 0.53
LINC02228-204ENST00000642115 CEP170BQ9Y4F5 1589 aaPredicted RBP18.38■□□□□ 0.53
LINC02228-204ENST00000642115 A0A0D9SFI3 127 aa18.38■□□□□ 0.53
LINC02228-204ENST00000642115 GOLGA6L19H0YKK7 550 aa18.38■□□□□ 0.53
LINC02228-204ENST00000642115 SEC31AO94979 1220 aaKnown RBP18.38■□□□□ 0.53
LINC02228-204ENST00000642115 GTF2A1P52655 376 aaPredicted RBP18.38■□□□□ 0.53
LINC02228-204ENST00000642115 RBM43Q6ZSC3 357 aaKnown RBP18.38■□□□□ 0.53
LINC02228-204ENST00000642115 TAOK2Q9UL54 1235 aa18.38■□□□□ 0.53
LINC02228-204ENST00000642115 PPP6R1Q9UPN7 881 aa18.38■□□□□ 0.53
LINC02228-204ENST00000642115 RICTORQ6R327 1708 aa18.38■□□□□ 0.53
LINC02228-204ENST00000642115 PDCP20941 246 aa18.37■□□□□ 0.53
LINC02228-204ENST00000642115 CASQ1P31415 396 aa18.37■□□□□ 0.53
LINC02228-204ENST00000642115 TMCO3Q6UWJ1 677 aa18.37■□□□□ 0.53
LINC02228-204ENST00000642115 MAP3K2Q9Y2U5 619 aa18.37■□□□□ 0.53
LINC02228-204ENST00000642115 LOC102724159A0A0B4J2E5 919 aa18.37■□□□□ 0.53
LINC02228-204ENST00000642115 SNW1Q13573 536 aaKnown RBP18.37■□□□□ 0.53
LINC02228-204ENST00000642115 PWP2Q15269 919 aaKnown RBP18.37■□□□□ 0.53
LINC02228-204ENST00000642115 CCDC93Q567U6 631 aa18.37■□□□□ 0.53
LINC02228-204ENST00000642115 GORABQ5T7V8 394 aa18.37■□□□□ 0.53
LINC02228-204ENST00000642115 EVI5LQ96CN4 794 aa18.37■□□□□ 0.53
LINC02228-204ENST00000642115 SCAND2PQ9GZW5 306 aaPredicted RBP18.37■□□□□ 0.53
LINC02228-204ENST00000642115 GEMIN8Q9NWZ8 242 aaKnown RBP18.37■□□□□ 0.53
LINC02228-204ENST00000642115 IQCB1Q15051 598 aa18.36■□□□□ 0.53
LINC02228-204ENST00000642115 MPRIPQ6WCQ1 1025 aa18.36■□□□□ 0.53
LINC02228-204ENST00000642115 DDX19AQ9NUU7 478 aaKnown RBP18.36■□□□□ 0.53
LINC02228-204ENST00000642115 SBNO1A3KN83 1393 aa18.36■□□□□ 0.53
LINC02228-204ENST00000642115 PSMA5P28066 241 aa18.36■□□□□ 0.53
LINC02228-204ENST00000642115 TEFQ10587 303 aa18.36■□□□□ 0.53
LINC02228-204ENST00000642115 TTC41PQ6P2S7 1318 aa18.36■□□□□ 0.53
LINC02228-204ENST00000642115 ABTB2Q8N961 1025 aa18.36■□□□□ 0.53
LINC02228-204ENST00000642115 MRFAP1L1Q96HT8 127 aa18.36■□□□□ 0.53
LINC02228-204ENST00000642115 MAP3K5Q99683 1374 aa18.36■□□□□ 0.53
LINC02228-204ENST00000642115 ATG3Q9NT62 314 aa18.36■□□□□ 0.53
LINC02228-204ENST00000642115 HOXC9P31274 260 aa18.36■□□□□ 0.53
LINC02228-204ENST00000642115 G3BP1Q13283 466 aaKnown RBP eCLIP18.36■□□□□ 0.53
LINC02228-204ENST00000642115 PGBD1Q96JS3 809 aa18.36■□□□□ 0.53
LINC02228-204ENST00000642115 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.36■□□□□ 0.53
LINC02228-204ENST00000642115 ELP1O95163 1332 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms