RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 MRVI1Q9Y6F6 885 aa16.43■□□□□ 0.22
PHGDH-233ENST00000642021 JAK2O60674 1132 aa16.43■□□□□ 0.22
PHGDH-233ENST00000642021 ANKLE2Q86XL3 938 aa16.43■□□□□ 0.22
PHGDH-233ENST00000642021 NFATC2IPQ8NCF5 419 aa16.43■□□□□ 0.22
PHGDH-233ENST00000642021 DACT1Q9NYF0 836 aa16.43■□□□□ 0.22
PHGDH-233ENST00000642021 FER1L4A9Z1Z3 1794 aa16.42■□□□□ 0.22
PHGDH-233ENST00000642021 CCDC129Q6ZRS4 1044 aa16.42■□□□□ 0.22
PHGDH-233ENST00000642021 LUZP1Q86V48 1076 aa16.42■□□□□ 0.22
PHGDH-233ENST00000642021 SEC62Q99442 399 aaKnown RBP16.42■□□□□ 0.22
PHGDH-233ENST00000642021 NUP62CLQ9H1M0 184 aa16.42■□□□□ 0.22
PHGDH-233ENST00000642021 ELP1O95163 1332 aa16.42■□□□□ 0.22
PHGDH-233ENST00000642021 PDCP20941 246 aa16.42■□□□□ 0.22
PHGDH-233ENST00000642021 ANKRD1Q15327 319 aa16.42■□□□□ 0.22
PHGDH-233ENST00000642021 TSGA10IPQ3SY00 556 aa16.42■□□□□ 0.22
PHGDH-233ENST00000642021 ALDH8A1Q9H2A2 487 aaPredicted RBP16.42■□□□□ 0.22
PHGDH-233ENST00000642021 OVOS2A0A0G2JMS6 1433 aa16.42■□□□□ 0.22
PHGDH-233ENST00000642021 FAM177BA6PVY3 158 aa16.41■□□□□ 0.22
PHGDH-233ENST00000642021 RFX5P48382 616 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-233ENST00000642021 TYRO3Q06418 890 aa16.41■□□□□ 0.22
PHGDH-233ENST00000642021 TFCP2Q12800 502 aa16.41■□□□□ 0.22
PHGDH-233ENST00000642021 MAP3K11Q16584 847 aa16.41■□□□□ 0.22
PHGDH-233ENST00000642021 KIAA1524Q8TCG1 905 aa16.41■□□□□ 0.22
PHGDH-233ENST00000642021 USP16Q9Y5T5 823 aa16.41■□□□□ 0.22
PHGDH-233ENST00000642021 PTPN12Q05209 780 aaKnown RBP16.41■□□□□ 0.22
PHGDH-233ENST00000642021 NEXNQ0ZGT2 675 aa16.41■□□□□ 0.22
PHGDH-233ENST00000642021 USPL1Q5W0Q7 1092 aa16.41■□□□□ 0.22
PHGDH-233ENST00000642021 LEO1Q8WVC0 666 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-233ENST00000642021 DDX11Q96FC9 970 aa16.41■□□□□ 0.22
PHGDH-233ENST00000642021 MAP7D2Q96T17 732 aa16.41■□□□□ 0.22
PHGDH-233ENST00000642021 METTL22Q9BUU2 404 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-233ENST00000642021 ZC3H6P61129 1189 aaKnown RBP16.4■□□□□ 0.22
PHGDH-233ENST00000642021 FAM200AQ8TCP9 573 aa16.4■□□□□ 0.22
PHGDH-233ENST00000642021 ZNF496Q96IT1 587 aaPredicted RBP16.4■□□□□ 0.22
PHGDH-233ENST00000642021 SPATA32Q96LK8 384 aa16.4■□□□□ 0.22
PHGDH-233ENST00000642021 JCADQ9P266 1359 aa16.4■□□□□ 0.22
PHGDH-233ENST00000642021 LRP10Q7Z4F1 713 aa16.4■□□□□ 0.22
PHGDH-233ENST00000642021 PGBD1Q96JS3 809 aa16.4■□□□□ 0.22
PHGDH-233ENST00000642021 SLC52A2Q9HAB3 445 aa16.4■□□□□ 0.22
PHGDH-233ENST00000642021 PHRF1Q9P1Y6 1649 aaKnown RBP16.4■□□□□ 0.22
PHGDH-233ENST00000642021 TNNI3KQ59H18 835 aa16.39■□□□□ 0.21
PHGDH-233ENST00000642021 COPRSQ9NQ92 184 aa16.39■□□□□ 0.21
PHGDH-233ENST00000642021 HMG20BQ9P0W2 317 aa16.39■□□□□ 0.21
PHGDH-233ENST00000642021 FPGT-TNNI3KV9GXZ4 949 aa16.39■□□□□ 0.21
PHGDH-233ENST00000642021 CHD2O14647 1828 aaKnown RBP16.39■□□□□ 0.21
PHGDH-233ENST00000642021 ATP5JP18859 108 aa16.39■□□□□ 0.21
PHGDH-233ENST00000642021 ANKRD13DQ6ZTN6 518 aa16.39■□□□□ 0.21
PHGDH-233ENST00000642021 PRIMPOLQ96LW4 560 aa16.39■□□□□ 0.21
PHGDH-233ENST00000642021 LRRC2Q9BYS8 371 aa16.39■□□□□ 0.21
PHGDH-233ENST00000642021 NR1I2O75469 434 aa16.38■□□□□ 0.21
PHGDH-233ENST00000642021 ZNF710Q8N1W2 664 aa16.38■□□□□ 0.21
PHGDH-233ENST00000642021 NEK1Q96PY6 1258 aa16.38■□□□□ 0.21
PHGDH-233ENST00000642021 DBNDD2Q9BQY9 259 aa16.38■□□□□ 0.21
PHGDH-233ENST00000642021 SCAND2PQ9GZW5 306 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-233ENST00000642021 TNMDQ9H2S6 317 aa16.38■□□□□ 0.21
PHGDH-233ENST00000642021 ERBB3P21860 1342 aa16.38■□□□□ 0.21
PHGDH-233ENST00000642021 CYP21A2P08686 494 aa16.38■□□□□ 0.21
PHGDH-233ENST00000642021 SLFNL1Q499Z3 407 aa16.38■□□□□ 0.21
PHGDH-233ENST00000642021 ANO6Q4KMQ2 910 aa16.38■□□□□ 0.21
PHGDH-233ENST00000642021 GTF3C6Q969F1 213 aa16.38■□□□□ 0.21
PHGDH-233ENST00000642021 DNAJC2Q99543 621 aaKnown RBP16.38■□□□□ 0.21
PHGDH-233ENST00000642021 CBX8Q9HC52 389 aa16.38■□□□□ 0.21
PHGDH-233ENST00000642021 ATP5J2-PTCD1G3V325 749 aa16.38■□□□□ 0.21
PHGDH-233ENST00000642021 PTCD1O75127 700 aaKnown RBP16.38■□□□□ 0.21
PHGDH-233ENST00000642021 HMGN5P82970 282 aaKnown RBP16.38■□□□□ 0.21
PHGDH-233ENST00000642021 Q6ZUG5 572 aa16.38■□□□□ 0.21
PHGDH-233ENST00000642021 UBE3BQ7Z3V4 1068 aa16.38■□□□□ 0.21
PHGDH-233ENST00000642021 CCDC9Q9Y3X0 531 aaKnown RBP16.38■□□□□ 0.21
PHGDH-233ENST00000642021 KDM6AO15550 1401 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-233ENST00000642021 NPHP3Q7Z494 1330 aa16.37■□□□□ 0.21
PHGDH-233ENST00000642021 GOLGA6L4A6NEF3 574 aa16.37■□□□□ 0.21
PHGDH-233ENST00000642021 BRF1Q92994 677 aa16.37■□□□□ 0.21
PHGDH-233ENST00000642021 ZNF609O15014 1411 aa16.37■□□□□ 0.21
PHGDH-233ENST00000642021 PTGS1P23219 599 aa16.37■□□□□ 0.21
PHGDH-233ENST00000642021 DDX46Q7L014 1031 aaKnown RBP16.37■□□□□ 0.21
PHGDH-233ENST00000642021 KRT28Q7Z3Y7 464 aa16.37■□□□□ 0.21
PHGDH-233ENST00000642021 SLIT3O75094 1523 aa16.36■□□□□ 0.21
PHGDH-233ENST00000642021 GTF2F1P35269 517 aaKnown RBP eCLIP16.36■□□□□ 0.21
PHGDH-233ENST00000642021 RESTQ13127 1097 aa16.36■□□□□ 0.21
PHGDH-233ENST00000642021 PAXIP1Q6ZW49 1069 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-233ENST00000642021 NLRP2Q9NX02 1062 aa16.36■□□□□ 0.21
PHGDH-233ENST00000642021 MRC1P22897 1456 aa16.36■□□□□ 0.21
PHGDH-233ENST00000642021 PHKG2P15735 406 aa16.36■□□□□ 0.21
PHGDH-233ENST00000642021 RBM43Q6ZSC3 357 aaKnown RBP16.36■□□□□ 0.21
PHGDH-233ENST00000642021 STOX1Q6ZVD7 989 aa16.36■□□□□ 0.21
PHGDH-233ENST00000642021 NRBP1Q9UHY1 535 aa16.36■□□□□ 0.21
PHGDH-233ENST00000642021 SIPA1L3O60292 1781 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-233ENST00000642021 RAPGEF4Q8WZA2 1011 aa16.35■□□□□ 0.21
PHGDH-233ENST00000642021 CLSTN2Q9H4D0 955 aa16.35■□□□□ 0.21
PHGDH-233ENST00000642021 SCRN1Q12765 414 aa16.35■□□□□ 0.21
PHGDH-233ENST00000642021 RABL6Q3YEC7 729 aaPredicted RBP16.35■□□□□ 0.21
PHGDH-233ENST00000642021 LRMPQ12912 555 aa16.34■□□□□ 0.21
PHGDH-233ENST00000642021 KRT32Q14532 448 aa16.34■□□□□ 0.21
PHGDH-233ENST00000642021 DDX19AQ9NUU7 478 aaKnown RBP16.34■□□□□ 0.21
PHGDH-233ENST00000642021 CEBPZQ03701 1054 aaKnown RBP16.34■□□□□ 0.21
PHGDH-233ENST00000642021 MCMDC2Q4G0Z9 681 aa16.34■□□□□ 0.21
PHGDH-233ENST00000642021 CCDC186Q7Z3E2 898 aa16.34■□□□□ 0.21
PHGDH-233ENST00000642021 MTERF4Q7Z6M4 381 aaKnown RBP16.34■□□□□ 0.21
PHGDH-233ENST00000642021 BICD2Q8TD16 824 aa16.34■□□□□ 0.21
PHGDH-233ENST00000642021 A0A087WZG4 1122 aa16.33■□□□□ 0.21
PHGDH-233ENST00000642021 A0A0G2JLW4 131 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms