RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 CACNA1FO60840 1977 aa18.11■□□□□ 0.49
SDHD-209ENST00000640554 TNRC6CQ9HCJ0 1690 aaKnown RBP18.1■□□□□ 0.49
SDHD-209ENST00000640554 ALDH1L1O75891 902 aa18.1■□□□□ 0.49
SDHD-209ENST00000640554 BRPF1P55201 1214 aaPredicted RBP18.1■□□□□ 0.49
SDHD-209ENST00000640554 RPS8P62241 208 aaKnown RBP18.1■□□□□ 0.49
SDHD-209ENST00000640554 PLA2G12BQ9BX93 195 aa18.1■□□□□ 0.49
SDHD-209ENST00000640554 GLTPD2A6NH11 291 aa18.09■□□□□ 0.49
SDHD-209ENST00000640554 PRELPP51888 382 aa18.09■□□□□ 0.49
SDHD-209ENST00000640554 F6X3S4 739 aa18.08■□□□□ 0.48
SDHD-209ENST00000640554 IARSP41252 1262 aaKnown RBP18.08■□□□□ 0.48
SDHD-209ENST00000640554 OLFM4Q6UX06 510 aa18.08■□□□□ 0.48
SDHD-209ENST00000640554 UBE3BQ7Z3V4 1068 aa18.08■□□□□ 0.48
SDHD-209ENST00000640554 MPNDQ8N594 471 aa18.08■□□□□ 0.48
SDHD-209ENST00000640554 JDP2Q8WYK2 163 aa18.08■□□□□ 0.48
SDHD-209ENST00000640554 RTFDC1Q9BY42 306 aaPredicted RBP18.08■□□□□ 0.48
SDHD-209ENST00000640554 SRCIN1Q9C0H9 1055 aa18.08■□□□□ 0.48
SDHD-209ENST00000640554 CTSWP56202 376 aa18.07■□□□□ 0.48
SDHD-209ENST00000640554 DPP8Q6V1X1 898 aaPredicted RBP18.07■□□□□ 0.48
SDHD-209ENST00000640554 TTLL11Q8NHH1 800 aa18.07■□□□□ 0.48
SDHD-209ENST00000640554 ZNF526Q8TF50 670 aaPredicted RBP18.07■□□□□ 0.48
SDHD-209ENST00000640554 CDC5LQ99459 802 aaKnown RBP18.07■□□□□ 0.48
SDHD-209ENST00000640554 ZNF277Q9NRM2 450 aaPredicted RBP18.07■□□□□ 0.48
SDHD-209ENST00000640554 SMC4Q9NTJ3 1288 aa18.07■□□□□ 0.48
SDHD-209ENST00000640554 SNED1Q8TER0 1413 aa18.06■□□□□ 0.48
SDHD-209ENST00000640554 RTL9Q8NET4 1388 aa18.06■□□□□ 0.48
SDHD-209ENST00000640554 CASP7P55210 303 aa18.06■□□□□ 0.48
SDHD-209ENST00000640554 SLC4A10Q6U841 1118 aa18.06■□□□□ 0.48
SDHD-209ENST00000640554 JARID2Q92833 1246 aaPredicted RBP18.06■□□□□ 0.48
SDHD-209ENST00000640554 CELF1Q92879 486 aaKnown RBP18.06■□□□□ 0.48
SDHD-209ENST00000640554 C9orf78Q9NZ63 289 aaPredicted RBP18.06■□□□□ 0.48
SDHD-209ENST00000640554 ZBED9Q6R2W3 1325 aa18.05■□□□□ 0.48
SDHD-209ENST00000640554 FER1L6Q2WGJ9 1857 aa18.05■□□□□ 0.48
SDHD-209ENST00000640554 GRM8O00222 908 aa18.04■□□□□ 0.48
SDHD-209ENST00000640554 CSF1RP07333 972 aa18.04■□□□□ 0.48
SDHD-209ENST00000640554 RARSP54136 660 aaKnown RBP18.04■□□□□ 0.48
SDHD-209ENST00000640554 ANKRD18AQ8IVF6 992 aa18.04■□□□□ 0.48
SDHD-209ENST00000640554 FZD9O00144 591 aa18.03■□□□□ 0.48
SDHD-209ENST00000640554 VEGFAP15692 232 aaPredicted RBP18.03■□□□□ 0.48
SDHD-209ENST00000640554 LARGE2Q8N3Y3 721 aa18.03■□□□□ 0.48
SDHD-209ENST00000640554 ARHGAP45Q92619 1136 aa18.03■□□□□ 0.48
SDHD-209ENST00000640554 API5Q9BZZ5 524 aaKnown RBP18.03■□□□□ 0.48
SDHD-209ENST00000640554 SEC31BQ9NQW1 1179 aa18.03■□□□□ 0.48
SDHD-209ENST00000640554 KIF3CO14782 793 aa18.02■□□□□ 0.48
SDHD-209ENST00000640554 IPO8O15397 1037 aaKnown RBP18.02■□□□□ 0.48
SDHD-209ENST00000640554 SBF1O95248 1867 aa18.02■□□□□ 0.48
SDHD-209ENST00000640554 BSDC1Q9NW68 430 aaPredicted RBP18.02■□□□□ 0.48
SDHD-209ENST00000640554 PODXL2Q9NZ53 605 aa18.02■□□□□ 0.48
SDHD-209ENST00000640554 NSFL1CQ9UNZ2 370 aaKnown RBP18.02■□□□□ 0.48
SDHD-209ENST00000640554 KIF16BQ96L93 1317 aa18.01■□□□□ 0.47
SDHD-209ENST00000640554 PPIP5K2O43314 1243 aa18.01■□□□□ 0.47
SDHD-209ENST00000640554 TOMM70O94826 608 aa18.01■□□□□ 0.47
SDHD-209ENST00000640554 EIF6P56537 245 aaKnown RBP18.01■□□□□ 0.47
SDHD-209ENST00000640554 C1QTNF8P60827 252 aa18.01■□□□□ 0.47
SDHD-209ENST00000640554 NIM1KQ8IY84 436 aa18.01■□□□□ 0.47
SDHD-209ENST00000640554 C16orf71Q8IYS4 520 aaPredicted RBP18.01■□□□□ 0.47
SDHD-209ENST00000640554 EYA3Q99504 573 aa18.01■□□□□ 0.47
SDHD-209ENST00000640554 BCL2L13Q9BXK5 485 aa18.01■□□□□ 0.47
SDHD-209ENST00000640554 GREM2Q9H772 168 aa18.01■□□□□ 0.47
SDHD-209ENST00000640554 NMRK2Q9NPI5 230 aa18.01■□□□□ 0.47
SDHD-209ENST00000640554 DDX60Q8IY21 1712 aaKnown RBP18.01■□□□□ 0.47
SDHD-209ENST00000640554 UTYO14607 1347 aa18■□□□□ 0.47
SDHD-209ENST00000640554 IGHMBP2P38935 993 aaKnown RBP18■□□□□ 0.47
SDHD-209ENST00000640554 CCT4P50991 539 aaKnown RBP18■□□□□ 0.47
SDHD-209ENST00000640554 KIAA2012Q0VF49 1180 aa18■□□□□ 0.47
SDHD-209ENST00000640554 RRAGCQ9HB90 399 aa18■□□□□ 0.47
SDHD-209ENST00000640554 NOB1Q9ULX3 412 aaKnown RBP18■□□□□ 0.47
SDHD-209ENST00000640554 HDAC5Q9UQL6 1122 aa18■□□□□ 0.47
SDHD-209ENST00000640554 L3MBTL3Q96JM7 780 aaPredicted RBP17.99■□□□□ 0.47
SDHD-209ENST00000640554 CCDC85AQ96PX6 553 aaPredicted RBP17.99■□□□□ 0.47
SDHD-209ENST00000640554 ZNRF3Q9ULT6 936 aa17.99■□□□□ 0.47
SDHD-209ENST00000640554 ANKRD18BA2A2Z9 1011 aa17.98■□□□□ 0.47
SDHD-209ENST00000640554 IQCA1LA6NCM1 817 aa17.98■□□□□ 0.47
SDHD-209ENST00000640554 C6orf229H3BNL8 230 aa17.98■□□□□ 0.47
SDHD-209ENST00000640554 ITGA6P23229 1130 aa17.98■□□□□ 0.47
SDHD-209ENST00000640554 FOXO4P98177 505 aa17.98■□□□□ 0.47
SDHD-209ENST00000640554 IFIT5Q13325 482 aaKnown RBP17.98■□□□□ 0.47
SDHD-209ENST00000640554 WASHC4Q2M389 1173 aa17.98■□□□□ 0.47
SDHD-209ENST00000640554 GPC2Q8N158 579 aa17.98■□□□□ 0.47
SDHD-209ENST00000640554 MPHOSPH8Q99549 860 aa17.98■□□□□ 0.47
SDHD-209ENST00000640554 ANKIB1Q9P2G1 1089 aa17.98■□□□□ 0.47
SDHD-209ENST00000640554 LAMB2P55268 1798 aa17.98■□□□□ 0.47
SDHD-209ENST00000640554 XDHP47989 1333 aa17.98■□□□□ 0.47
SDHD-209ENST00000640554 DDNO94850 711 aaPredicted RBP17.97■□□□□ 0.47
SDHD-209ENST00000640554 GPSM2P81274 684 aa17.97■□□□□ 0.47
SDHD-209ENST00000640554 AOC3Q16853 763 aa17.97■□□□□ 0.47
SDHD-209ENST00000640554 RBM46Q8TBY0 533 aaKnown RBP17.97■□□□□ 0.47
SDHD-209ENST00000640554 ZC3H12CQ9C0D7 883 aaKnown RBP17.97■□□□□ 0.47
SDHD-209ENST00000640554 GGA1Q9UJY5 639 aa17.97■□□□□ 0.47
SDHD-209ENST00000640554 CACNA1SQ13698 1873 aa17.97■□□□□ 0.47
SDHD-209ENST00000640554 ATP2B4P23634 1241 aa17.96■□□□□ 0.47
SDHD-209ENST00000640554 CCDC57Q2TAC2 916 aa17.96■□□□□ 0.47
SDHD-209ENST00000640554 LMBR1LQ6UX01 489 aa17.96■□□□□ 0.47
SDHD-209ENST00000640554 TBC1D16Q8TBP0 767 aa17.96■□□□□ 0.47
SDHD-209ENST00000640554 ANKRD2Q9GZV1 360 aa17.96■□□□□ 0.47
SDHD-209ENST00000640554 POLLQ9UGP5 575 aa17.96■□□□□ 0.47
SDHD-209ENST00000640554 MINPP1Q9UNW1 487 aa17.96■□□□□ 0.47
SDHD-209ENST00000640554 NBPF7P0C2Y1 421 aaPredicted RBP17.95■□□□□ 0.46
SDHD-209ENST00000640554 FSTL1Q12841 308 aa17.95■□□□□ 0.46
SDHD-209ENST00000640554 TNIP1Q15025 636 aa17.95■□□□□ 0.46
SDHD-209ENST00000640554 FAM161AQ3B820 660 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms