RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 IBTKQ9P2D0 1353 aaPredicted RBP18.17■□□□□ 0.5
HLA-C-210ENST00000640219 KIAA2012Q0VF49 1180 aa18.16■□□□□ 0.5
HLA-C-210ENST00000640219 DPP8Q6V1X1 898 aaPredicted RBP18.16■□□□□ 0.5
HLA-C-210ENST00000640219 KRT26Q7Z3Y9 468 aa18.16■□□□□ 0.5
HLA-C-210ENST00000640219 MICALL2Q8IY33 904 aa18.16■□□□□ 0.5
HLA-C-210ENST00000640219 CSRNP1Q96S65 589 aa18.16■□□□□ 0.5
HLA-C-210ENST00000640219 UBN2Q6ZU65 1347 aa18.16■□□□□ 0.5
HLA-C-210ENST00000640219 KIF6Q6ZMV9 814 aa18.15■□□□□ 0.5
HLA-C-210ENST00000640219 MCM10Q7L590 875 aa18.15■□□□□ 0.5
HLA-C-210ENST00000640219 RTF1Q92541 710 aaKnown RBP18.15■□□□□ 0.5
HLA-C-210ENST00000640219 NLRP3Q96P20 1036 aa18.15■□□□□ 0.5
HLA-C-210ENST00000640219 NTSR2O95665 410 aa18.14■□□□□ 0.49
HLA-C-210ENST00000640219 PRKAR2BP31323 418 aa18.14■□□□□ 0.49
HLA-C-210ENST00000640219 PKN2Q16513 984 aaKnown RBP18.14■□□□□ 0.49
HLA-C-210ENST00000640219 TTLL7Q6ZT98 887 aa18.14■□□□□ 0.49
HLA-C-210ENST00000640219 SAMD7Q7Z3H4 446 aa18.14■□□□□ 0.49
HLA-C-210ENST00000640219 MPNDQ8N594 471 aa18.14■□□□□ 0.49
HLA-C-210ENST00000640219 GTF3C3Q9Y5Q9 886 aa18.14■□□□□ 0.49
HLA-C-210ENST00000640219 AKAP11Q9UKA4 1901 aa18.13■□□□□ 0.49
HLA-C-210ENST00000640219 SLC10A3P09131 477 aa18.13■□□□□ 0.49
HLA-C-210ENST00000640219 ZBTB12Q9Y330 459 aaPredicted RBP18.13■□□□□ 0.49
HLA-C-210ENST00000640219 NUP98P52948 1817 aa18.13■□□□□ 0.49
HLA-C-210ENST00000640219 YDJCA8MPS7 323 aa18.12■□□□□ 0.49
HLA-C-210ENST00000640219 ADM5C9JUS6 153 aa18.12■□□□□ 0.49
HLA-C-210ENST00000640219 TBC1D10BQ4KMP7 808 aaPredicted RBP18.12■□□□□ 0.49
HLA-C-210ENST00000640219 HABP4Q5JVS0 413 aaKnown RBP18.12■□□□□ 0.49
HLA-C-210ENST00000640219 PPP1R42Q7Z4L9 355 aa18.12■□□□□ 0.49
HLA-C-210ENST00000640219 SP8Q8IXZ3 490 aa18.12■□□□□ 0.49
HLA-C-210ENST00000640219 ZNF34Q8IZ26 560 aa18.12■□□□□ 0.49
HLA-C-210ENST00000640219 DPF2Q92785 391 aa18.12■□□□□ 0.49
HLA-C-210ENST00000640219 DCPSQ96C86 337 aaKnown RBP18.12■□□□□ 0.49
HLA-C-210ENST00000640219 YTHDC1Q96MU7 727 aaKnown RBP18.12■□□□□ 0.49
HLA-C-210ENST00000640219 ZBTB3Q9H5J0 574 aa18.12■□□□□ 0.49
HLA-C-210ENST00000640219 HDAC9Q9UKV0 1011 aa18.12■□□□□ 0.49
HLA-C-210ENST00000640219 RRP7AQ9Y3A4 280 aaKnown RBP18.12■□□□□ 0.49
HLA-C-210ENST00000640219 ABCC4O15439 1325 aa18.12■□□□□ 0.49
HLA-C-210ENST00000640219 BBOX1O75936 387 aa18.11■□□□□ 0.49
HLA-C-210ENST00000640219 REM2Q8IYK8 340 aaPredicted RBP18.11■□□□□ 0.49
HLA-C-210ENST00000640219 RSPH6AQ9H0K4 717 aa18.11■□□□□ 0.49
HLA-C-210ENST00000640219 DCTN1Q14203 1278 aa18.1■□□□□ 0.49
HLA-C-210ENST00000640219 CFAP53Q96M91 514 aa18.1■□□□□ 0.49
HLA-C-210ENST00000640219 MYL6BP14649 208 aa18.09■□□□□ 0.49
HLA-C-210ENST00000640219 RBM26Q5T8P6 1007 aaKnown RBP18.09■□□□□ 0.49
HLA-C-210ENST00000640219 PSMD14O00487 310 aa18.08■□□□□ 0.48
HLA-C-210ENST00000640219 EGFRP00533 1210 aa18.08■□□□□ 0.48
HLA-C-210ENST00000640219 U2AF1L5P0DN76 240 aaPredicted RBP18.08■□□□□ 0.48
HLA-C-210ENST00000640219 U2AF1Q01081 240 aaKnown RBP eCLIP18.08■□□□□ 0.48
HLA-C-210ENST00000640219 TAF7Q15545 349 aaPredicted RBP18.08■□□□□ 0.48
HLA-C-210ENST00000640219 PARP10Q53GL7 1025 aa18.08■□□□□ 0.48
HLA-C-210ENST00000640219 SLC10A5Q5PT55 438 aa18.08■□□□□ 0.48
HLA-C-210ENST00000640219 GIGYF2Q6Y7W6 1299 aaKnown RBP18.08■□□□□ 0.48
HLA-C-210ENST00000640219 MIS18AQ9NYP9 233 aa18.08■□□□□ 0.48
HLA-C-210ENST00000640219 LAMB4A4D0S4 1761 aa18.07■□□□□ 0.48
HLA-C-210ENST00000640219 RASAL3Q86YV0 1011 aa18.07■□□□□ 0.48
HLA-C-210ENST00000640219 ZNF296Q8WUU4 475 aaPredicted RBP18.07■□□□□ 0.48
HLA-C-210ENST00000640219 DLG5Q8TDM6 1919 aa18.07■□□□□ 0.48
HLA-C-210ENST00000640219 SULF1Q8IWU6 871 aa18.06■□□□□ 0.48
HLA-C-210ENST00000640219 UTP14AQ9BVJ6 771 aaKnown RBP18.06■□□□□ 0.48
HLA-C-210ENST00000640219 POLR2AP24928 1970 aaKnown RBP18.06■□□□□ 0.48
HLA-C-210ENST00000640219 HTATSF1O43719 755 aaKnown RBP18.05■□□□□ 0.48
HLA-C-210ENST00000640219 TBC1D8O95759 1140 aa18.05■□□□□ 0.48
HLA-C-210ENST00000640219 RPS12P25398 132 aaKnown RBP18.05■□□□□ 0.48
HLA-C-210ENST00000640219 FBXO46Q6PJ61 603 aaPredicted RBP18.05■□□□□ 0.48
HLA-C-210ENST00000640219 DDX46Q7L014 1031 aaKnown RBP18.04■□□□□ 0.48
HLA-C-210ENST00000640219 CDCA5Q96FF9 252 aa18.04■□□□□ 0.48
HLA-C-210ENST00000640219 DBNDD1Q9H9R9 158 aa18.04■□□□□ 0.48
HLA-C-210ENST00000640219 GGA3Q9NZ52 723 aa18.04■□□□□ 0.48
HLA-C-210ENST00000640219 GRAPQ13588 217 aa18.03■□□□□ 0.48
HLA-C-210ENST00000640219 WASHC4Q2M389 1173 aa18.03■□□□□ 0.48
HLA-C-210ENST00000640219 KIF4BQ2VIQ3 1234 aa18.03■□□□□ 0.48
HLA-C-210ENST00000640219 GRAPLQ8TC17 118 aaPredicted RBP18.03■□□□□ 0.48
HLA-C-210ENST00000640219 HCLS1P14317 486 aaPredicted RBP18.02■□□□□ 0.48
HLA-C-210ENST00000640219 NUDCQ9Y266 331 aa18.02■□□□□ 0.48
HLA-C-210ENST00000640219 DUOX1Q9NRD9 1551 aa18.01■□□□□ 0.47
HLA-C-210ENST00000640219 GPR25O00155 361 aa18.01■□□□□ 0.47
HLA-C-210ENST00000640219 RIMBP2O15034 1052 aa18.01■□□□□ 0.47
HLA-C-210ENST00000640219 TMC4Q7Z404 712 aa18.01■□□□□ 0.47
HLA-C-210ENST00000640219 PNISRQ8TF01 805 aaKnown RBP18.01■□□□□ 0.47
HLA-C-210ENST00000640219 ASTN2O75129 1339 aaPredicted RBP18■□□□□ 0.47
HLA-C-210ENST00000640219 EIF4A1P60842 406 aaKnown RBP18■□□□□ 0.47
HLA-C-210ENST00000640219 FKBP1BP68106 108 aa18■□□□□ 0.47
HLA-C-210ENST00000640219 KCNQ5Q9NR82 932 aa18■□□□□ 0.47
HLA-C-210ENST00000640219 ECE2O60344 883 aa17.99■□□□□ 0.47
HLA-C-210ENST00000640219 FXR1P51114 621 aaKnown RBP eCLIP17.99■□□□□ 0.47
HLA-C-210ENST00000640219 NOM1Q5C9Z4 860 aaKnown RBP17.99■□□□□ 0.47
HLA-C-210ENST00000640219 NSFL1CQ9UNZ2 370 aaKnown RBP17.99■□□□□ 0.47
HLA-C-210ENST00000640219 C6orf229H3BNL8 230 aa17.98■□□□□ 0.47
HLA-C-210ENST00000640219 RALBP1Q15311 655 aa17.98■□□□□ 0.47
HLA-C-210ENST00000640219 DOK7Q18PE1 504 aa17.98■□□□□ 0.47
HLA-C-210ENST00000640219 RTL9Q8NET4 1388 aa17.98■□□□□ 0.47
HLA-C-210ENST00000640219 ANKRD36CQ5JPF3 1778 aa17.98■□□□□ 0.47
HLA-C-210ENST00000640219 ERBB4Q15303 1308 aa17.98■□□□□ 0.47
HLA-C-210ENST00000640219 MYBBP1AQ9BQG0 1328 aaKnown RBP17.98■□□□□ 0.47
HLA-C-210ENST00000640219 LAMB2P55268 1798 aa17.97■□□□□ 0.47
HLA-C-210ENST00000640219 TM4SF4P48230 202 aa17.97■□□□□ 0.47
HLA-C-210ENST00000640219 ANGEL2Q5VTE6 544 aaKnown RBP17.97■□□□□ 0.47
HLA-C-210ENST00000640219 THUMPD2Q9BTF0 503 aaKnown RBP17.97■□□□□ 0.47
HLA-C-210ENST00000640219 UBE2Q2LH0YL09 131 aa17.96■□□□□ 0.47
HLA-C-210ENST00000640219 FKTNO75072 461 aa17.96■□□□□ 0.47
HLA-C-210ENST00000640219 SCARF1Q14162 830 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms