RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 M0R2N6 131 aa10.4□□□□□ -0.74
RFC1-217ENST00000639695 PPP1R12BO60237 982 aaPredicted RBP10.4□□□□□ -0.74
RFC1-217ENST00000639695 NEUROD1Q13562 356 aa10.4□□□□□ -0.74
RFC1-217ENST00000639695 ADGRE1Q14246 886 aa10.4□□□□□ -0.74
RFC1-217ENST00000639695 MBTPS1Q14703 1052 aa10.4□□□□□ -0.74
RFC1-217ENST00000639695 BTLAQ7Z6A9 289 aa10.4□□□□□ -0.74
RFC1-217ENST00000639695 ANKMY2Q8IV38 441 aa10.4□□□□□ -0.74
RFC1-217ENST00000639695 ALDH16A1Q8IZ83 802 aa10.4□□□□□ -0.74
RFC1-217ENST00000639695 NACC1Q96RE7 527 aa10.4□□□□□ -0.74
RFC1-217ENST00000639695 IGFLR1Q9H665 355 aa10.4□□□□□ -0.74
RFC1-217ENST00000639695 NAGPAQ9UK23 515 aa10.4□□□□□ -0.74
RFC1-217ENST00000639695 LILRB5O75023 590 aa10.39□□□□□ -0.75
RFC1-217ENST00000639695 PHLDB3Q6NSJ2 640 aa10.39□□□□□ -0.75
RFC1-217ENST00000639695 SIX5Q8N196 739 aa10.39□□□□□ -0.75
RFC1-217ENST00000639695 LARGE2Q8N3Y3 721 aa10.39□□□□□ -0.75
RFC1-217ENST00000639695 NUDT8Q8WV74 236 aa10.39□□□□□ -0.75
RFC1-217ENST00000639695 CLP1Q92989 425 aaKnown RBP10.39□□□□□ -0.75
RFC1-217ENST00000639695 UBE2OQ9C0C9 1292 aaKnown RBP10.39□□□□□ -0.75
RFC1-217ENST00000639695 GAS2L2Q8NHY3 880 aa10.38□□□□□ -0.75
RFC1-217ENST00000639695 C2orf49Q9BVC5 232 aaPredicted RBP10.38□□□□□ -0.75
RFC1-217ENST00000639695 SWI5Q1ZZU3 235 aa10.37□□□□□ -0.75
RFC1-217ENST00000639695 ARTNQ5T4W7 220 aa10.37□□□□□ -0.75
RFC1-217ENST00000639695 NGLY1Q96IV0 654 aa10.37□□□□□ -0.75
RFC1-217ENST00000639695 JPH1Q9HDC5 661 aaPredicted RBP10.37□□□□□ -0.75
RFC1-217ENST00000639695 CHMP3Q9Y3E7 222 aa10.37□□□□□ -0.75
RFC1-217ENST00000639695 RBM19Q9Y4C8 960 aaKnown RBP10.37□□□□□ -0.75
RFC1-217ENST00000639695 LGR5O75473 907 aa10.36□□□□□ -0.75
RFC1-217ENST00000639695 ATP2B4P23634 1241 aa10.36□□□□□ -0.75
RFC1-217ENST00000639695 GRNP28799 593 aaKnown RBP10.36□□□□□ -0.75
RFC1-217ENST00000639695 ILDR2Q71H61 639 aa10.36□□□□□ -0.75
RFC1-217ENST00000639695 DNAJB12Q9NXW2 375 aaKnown RBP10.36□□□□□ -0.75
RFC1-217ENST00000639695 BCS1LQ9Y276 419 aa10.36□□□□□ -0.75
RFC1-217ENST00000639695 ATAD2Q6PL18 1390 aa10.36□□□□□ -0.75
RFC1-217ENST00000639695 C9orf172C9J069 976 aa10.35□□□□□ -0.75
RFC1-217ENST00000639695 ELNP15502 786 aa10.35□□□□□ -0.75
RFC1-217ENST00000639695 AFF1P51825 1210 aaKnown RBP10.35□□□□□ -0.75
RFC1-217ENST00000639695 SCG3Q8WXD2 468 aaKnown RBP10.35□□□□□ -0.75
RFC1-217ENST00000639695 GSX2Q9BZM3 304 aa10.35□□□□□ -0.75
RFC1-217ENST00000639695 FAM69CQ0P6D2 419 aa10.34□□□□□ -0.75
RFC1-217ENST00000639695 DPYDQ12882 1025 aa10.34□□□□□ -0.75
RFC1-217ENST00000639695 PSAPL1Q6NUJ1 521 aa10.34□□□□□ -0.75
RFC1-217ENST00000639695 CHMP7Q8WUX9 453 aaPredicted RBP10.34□□□□□ -0.75
RFC1-217ENST00000639695 ZFP64Q9NPA5 681 aa10.34□□□□□ -0.75
RFC1-217ENST00000639695 RBM47A0AV96 593 aaKnown RBP10.33□□□□□ -0.76
RFC1-217ENST00000639695 TXNRD3Q86VQ6 643 aa10.33□□□□□ -0.76
RFC1-217ENST00000639695 STAG2Q8N3U4 1231 aa10.33□□□□□ -0.76
RFC1-217ENST00000639695 LENG1Q96BZ8 264 aaPredicted RBP10.33□□□□□ -0.76
RFC1-217ENST00000639695 DMGDHQ9UI17 866 aaKnown RBP10.33□□□□□ -0.76
RFC1-217ENST00000639695 SOWAHDA6NJG2 315 aa10.32□□□□□ -0.76
RFC1-217ENST00000639695 NFKB1P19838 968 aa10.32□□□□□ -0.76
RFC1-217ENST00000639695 DMRTC2Q8IXT2 367 aaPredicted RBP10.32□□□□□ -0.76
RFC1-217ENST00000639695 H2AFB1P0C5Y9 115 aa10.31□□□□□ -0.76
RFC1-217ENST00000639695 H2AFB2P0C5Z0 115 aa10.31□□□□□ -0.76
RFC1-217ENST00000639695 PLAURQ03405 335 aa10.31□□□□□ -0.76
RFC1-217ENST00000639695 FMR1NBQ8N0W7 255 aaPredicted RBP10.31□□□□□ -0.76
RFC1-217ENST00000639695 SSBP4Q9BWG4 385 aaPredicted RBP10.31□□□□□ -0.76
RFC1-217ENST00000639695 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.31□□□□□ -0.76
RFC1-217ENST00000639695 RAC1P63000 192 aa10.3□□□□□ -0.76
RFC1-217ENST00000639695 BIN2Q9UBW5 565 aaPredicted RBP10.3□□□□□ -0.76
RFC1-217ENST00000639695 NRG1Q02297 640 aaPredicted RBP10.29□□□□□ -0.76
RFC1-217ENST00000639695 GRIK5Q16478 980 aa10.29□□□□□ -0.76
RFC1-217ENST00000639695 SLAIN2Q9P270 581 aa10.29□□□□□ -0.76
RFC1-217ENST00000639695 SEC13P55735 322 aa10.28□□□□□ -0.76
RFC1-217ENST00000639695 CCINQ13939 588 aa10.28□□□□□ -0.76
RFC1-217ENST00000639695 TP53INP1Q96A56 240 aa10.28□□□□□ -0.76
RFC1-217ENST00000639695 ZFATQ9P243 1243 aa10.28□□□□□ -0.76
RFC1-217ENST00000639695 ZBTB42B2RXF5 422 aa10.27□□□□□ -0.77
RFC1-217ENST00000639695 TGFBR3LH3BV60 316 aa10.27□□□□□ -0.77
RFC1-217ENST00000639695 SERPINB4P48594 390 aa10.27□□□□□ -0.77
RFC1-217ENST00000639695 RTN1Q16799 776 aa10.27□□□□□ -0.77
RFC1-217ENST00000639695 IER5Q5VY09 327 aa10.27□□□□□ -0.77
RFC1-217ENST00000639695 RGS9O75916 674 aaPredicted RBP10.26□□□□□ -0.77
RFC1-217ENST00000639695 CPB1P15086 417 aa10.26□□□□□ -0.77
RFC1-217ENST00000639695 DNAJC14Q6Y2X3 702 aaPredicted RBP10.26□□□□□ -0.77
RFC1-217ENST00000639695 FAM35AQ86V20 835 aa10.26□□□□□ -0.77
RFC1-217ENST00000639695 PNMA5Q96PV4 448 aa10.26□□□□□ -0.77
RFC1-217ENST00000639695 KLK14Q9P0G3 267 aa10.26□□□□□ -0.77
RFC1-217ENST00000639695 USP21Q9UK80 565 aa10.26□□□□□ -0.77
RFC1-217ENST00000639695 KRT25Q7Z3Z0 450 aa10.25□□□□□ -0.77
RFC1-217ENST00000639695 KRTAP1-3Q8IUG1 177 aa10.25□□□□□ -0.77
RFC1-217ENST00000639695 LPIN3Q9BQK8 851 aa10.25□□□□□ -0.77
RFC1-217ENST00000639695 UNCXA6NJT0 531 aa10.24□□□□□ -0.77
RFC1-217ENST00000639695 HYAL3O43820 417 aaPredicted RBP10.24□□□□□ -0.77
RFC1-217ENST00000639695 INPP5BP32019 993 aa10.24□□□□□ -0.77
RFC1-217ENST00000639695 MLLT1Q03111 559 aaPredicted RBP10.24□□□□□ -0.77
RFC1-217ENST00000639695 LRP8Q14114 963 aa10.24□□□□□ -0.77
RFC1-217ENST00000639695 PERM1Q5SV97 790 aa10.24□□□□□ -0.77
RFC1-217ENST00000639695 KRTAP4-12Q9BQ66 201 aa10.24□□□□□ -0.77
RFC1-217ENST00000639695 HINFPQ9BQA5 517 aa10.24□□□□□ -0.77
RFC1-217ENST00000639695 BCL2L13Q9BXK5 485 aa10.24□□□□□ -0.77
RFC1-217ENST00000639695 EFCC1Q9HA90 598 aa10.24□□□□□ -0.77
RFC1-217ENST00000639695 SHROOM4Q9ULL8 1493 aa10.23□□□□□ -0.77
RFC1-217ENST00000639695 PRMT3O60678 531 aa10.23□□□□□ -0.77
RFC1-217ENST00000639695 HIF1AQ16665 826 aa10.23□□□□□ -0.77
RFC1-217ENST00000639695 MSL1Q68DK7 614 aa10.23□□□□□ -0.77
RFC1-217ENST00000639695 EGFL7Q9UHF1 273 aa10.23□□□□□ -0.77
RFC1-217ENST00000639695 ABL1P00519 1130 aa10.22□□□□□ -0.77
RFC1-217ENST00000639695 TARSP26639 723 aaKnown RBP10.22□□□□□ -0.77
RFC1-217ENST00000639695 IDH3AP50213 366 aa10.22□□□□□ -0.77
RFC1-217ENST00000639695 IFT43Q96FT9 208 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms