RNA–Protein interactions for RNA: ENST00000639544.1

KCNMA1-264, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-264ENST00000639544 HCLS1P14317 486 aaPredicted RBP12.89□□□□□ -0.35
KCNMA1-264ENST00000639544 CTSWP56202 376 aa12.89□□□□□ -0.35
KCNMA1-264ENST00000639544 NBPF5PQ86XG9 351 aaPredicted RBP12.89□□□□□ -0.35
KCNMA1-264ENST00000639544 CCDC24Q8N4L8 307 aa12.89□□□□□ -0.35
KCNMA1-264ENST00000639544 TPTE2Q6XPS3 522 aa12.88□□□□□ -0.35
KCNMA1-264ENST00000639544 CNBD1Q8NA66 436 aa12.88□□□□□ -0.35
KCNMA1-264ENST00000639544 PNMA6EA0A0J9YXQ4 647 aa12.88□□□□□ -0.35
KCNMA1-264ENST00000639544 PDE8AO60658 829 aa12.88□□□□□ -0.35
KCNMA1-264ENST00000639544 SRGNP10124 158 aa12.88□□□□□ -0.35
KCNMA1-264ENST00000639544 SSH3Q8TE77 659 aa12.87□□□□□ -0.35
KCNMA1-264ENST00000639544 GNAI3P08754 354 aa12.87□□□□□ -0.35
KCNMA1-264ENST00000639544 IRX6P78412 446 aaPredicted RBP12.87□□□□□ -0.35
KCNMA1-264ENST00000639544 ARXQ96QS3 562 aa12.87□□□□□ -0.35
KCNMA1-264ENST00000639544 C1orf115Q9H7X2 142 aa12.87□□□□□ -0.35
KCNMA1-264ENST00000639544 PARP3Q9Y6F1 533 aa12.87□□□□□ -0.35
KCNMA1-264ENST00000639544 SBF1O95248 1867 aa12.87□□□□□ -0.35
KCNMA1-264ENST00000639544 MSH5O43196 834 aa12.87□□□□□ -0.35
KCNMA1-264ENST00000639544 C7orf43Q8WVR3 580 aa12.86□□□□□ -0.35
KCNMA1-264ENST00000639544 GREM2Q9H772 168 aa12.86□□□□□ -0.35
KCNMA1-264ENST00000639544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.86□□□□□ -0.35
KCNMA1-264ENST00000639544 PSME4Q14997 1843 aa12.86□□□□□ -0.35
KCNMA1-264ENST00000639544 AAMPQ13685 434 aa12.86□□□□□ -0.35
KCNMA1-264ENST00000639544 IRS2Q9Y4H2 1338 aa12.86□□□□□ -0.35
KCNMA1-264ENST00000639544 ATP8B2P98198 1209 aa12.86□□□□□ -0.35
KCNMA1-264ENST00000639544 NPM2Q86SE8 214 aaKnown RBP12.86□□□□□ -0.35
KCNMA1-264ENST00000639544 GNAI2P04899 355 aa12.85□□□□□ -0.35
KCNMA1-264ENST00000639544 UBTFL1P0CB47 393 aaPredicted RBP12.85□□□□□ -0.35
KCNMA1-264ENST00000639544 PTPN12Q05209 780 aaKnown RBP12.85□□□□□ -0.35
KCNMA1-264ENST00000639544 RTL5Q5HYW3 569 aaPredicted RBP12.85□□□□□ -0.35
KCNMA1-264ENST00000639544 SPON1Q9HCB6 807 aa12.85□□□□□ -0.35
KCNMA1-264ENST00000639544 FAM177BA6PVY3 158 aa12.85□□□□□ -0.35
KCNMA1-264ENST00000639544 C9orf78Q9NZ63 289 aaPredicted RBP12.85□□□□□ -0.35
KCNMA1-264ENST00000639544 CD2APQ9Y5K6 639 aa12.85□□□□□ -0.35
KCNMA1-264ENST00000639544 DICER1Q9UPY3 1922 aaKnown RBP12.85□□□□□ -0.35
KCNMA1-264ENST00000639544 KDM2BQ8NHM5 1336 aa12.85□□□□□ -0.35
KCNMA1-264ENST00000639544 FAM161AQ3B820 660 aa12.84□□□□□ -0.35
KCNMA1-264ENST00000639544 LMBR1LQ6UX01 489 aa12.84□□□□□ -0.35
KCNMA1-264ENST00000639544 SEC31BQ9NQW1 1179 aa12.84□□□□□ -0.35
KCNMA1-264ENST00000639544 ATG9AQ7Z3C6 839 aa12.84□□□□□ -0.35
KCNMA1-264ENST00000639544 VGLL2Q8N8G2 317 aa12.84□□□□□ -0.35
KCNMA1-264ENST00000639544 NOP58Q9Y2X3 529 aaKnown RBP12.84□□□□□ -0.35
KCNMA1-264ENST00000639544 COL4A5P29400 1685 aa12.83□□□□□ -0.35
KCNMA1-264ENST00000639544 HDAC1Q13547 482 aaPredicted RBP12.83□□□□□ -0.36
KCNMA1-264ENST00000639544 NLGN2Q8NFZ4 835 aa12.83□□□□□ -0.36
KCNMA1-264ENST00000639544 TGFB2P61812 414 aa12.83□□□□□ -0.36
KCNMA1-264ENST00000639544 ST5P78524 1137 aa12.83□□□□□ -0.36
KCNMA1-264ENST00000639544 CRAMP1Q96RY5 1269 aa12.83□□□□□ -0.36
KCNMA1-264ENST00000639544 IGHDP01880 384 aa12.83□□□□□ -0.36
KCNMA1-264ENST00000639544 STYK1Q6J9G0 422 aa12.83□□□□□ -0.36
KCNMA1-264ENST00000639544 CELF1Q92879 486 aaKnown RBP12.83□□□□□ -0.36
KCNMA1-264ENST00000639544 COPRSQ9NQ92 184 aa12.83□□□□□ -0.36
KCNMA1-264ENST00000639544 CCDC88AQ3V6T2 1871 aa12.82□□□□□ -0.36
KCNMA1-264ENST00000639544 CHRNA5P30532 468 aa12.82□□□□□ -0.36
KCNMA1-264ENST00000639544 AKAP11Q9UKA4 1901 aa12.82□□□□□ -0.36
KCNMA1-264ENST00000639544 RPAP2Q8IXW5 612 aaPredicted RBP12.82□□□□□ -0.36
KCNMA1-264ENST00000639544 RIPOR2Q9Y4F9 1068 aa12.82□□□□□ -0.36
KCNMA1-264ENST00000639544 DPEP1P16444 411 aa12.81□□□□□ -0.36
KCNMA1-264ENST00000639544 ITGA6P23229 1130 aa12.81□□□□□ -0.36
KCNMA1-264ENST00000639544 PDE6BP35913 854 aa12.81□□□□□ -0.36
KCNMA1-264ENST00000639544 ERICH6BQ5W0A0 696 aa12.81□□□□□ -0.36
KCNMA1-264ENST00000639544 KLHDC4Q8TBB5 520 aa12.8□□□□□ -0.36
KCNMA1-264ENST00000639544 NLRP3Q96P20 1036 aa12.8□□□□□ -0.36
KCNMA1-264ENST00000639544 POLD1P28340 1107 aa12.8□□□□□ -0.36
KCNMA1-264ENST00000639544 FHDC1Q9C0D6 1143 aaPredicted RBP12.8□□□□□ -0.36
KCNMA1-264ENST00000639544 PDZRN3Q9UPQ7 1066 aa12.8□□□□□ -0.36
KCNMA1-264ENST00000639544 NPR1P16066 1061 aa12.8□□□□□ -0.36
KCNMA1-264ENST00000639544 GRAPQ13588 217 aa12.8□□□□□ -0.36
KCNMA1-264ENST00000639544 GRAPLQ8TC17 118 aaPredicted RBP12.8□□□□□ -0.36
KCNMA1-264ENST00000639544 MASTLQ96GX5 879 aa12.8□□□□□ -0.36
KCNMA1-264ENST00000639544 ZNF594Q96JF6 807 aaPredicted RBP12.8□□□□□ -0.36
KCNMA1-264ENST00000639544 PUS3Q9BZE2 481 aaKnown RBP12.79□□□□□ -0.36
KCNMA1-264ENST00000639544 DCTPP1Q9H773 170 aa12.79□□□□□ -0.36
KCNMA1-264ENST00000639544 A0A0G2JLW4 131 aa12.79□□□□□ -0.36
KCNMA1-264ENST00000639544 CIAO1O76071 339 aa12.79□□□□□ -0.36
KCNMA1-264ENST00000639544 SASH1O94885 1247 aa12.79□□□□□ -0.36
KCNMA1-264ENST00000639544 CCDC152Q4G0S7 254 aa12.79□□□□□ -0.36
KCNMA1-264ENST00000639544 PA2G4Q9UQ80 394 aaKnown RBP12.79□□□□□ -0.36
KCNMA1-264ENST00000639544 SCN9AQ15858 1988 aa12.79□□□□□ -0.36
KCNMA1-264ENST00000639544 C2CD5Q86YS7 1000 aa12.78□□□□□ -0.36
KCNMA1-264ENST00000639544 SYT17Q9BSW7 474 aa12.78□□□□□ -0.36
KCNMA1-264ENST00000639544 DOCK2Q92608 1830 aa12.78□□□□□ -0.36
KCNMA1-264ENST00000639544 MYH13Q9UKX3 1938 aa12.78□□□□□ -0.36
KCNMA1-264ENST00000639544 WTIPA6NIX2 430 aaPredicted RBP12.78□□□□□ -0.36
KCNMA1-264ENST00000639544 LRRC24Q50LG9 513 aa12.78□□□□□ -0.36
KCNMA1-264ENST00000639544 SMC5Q8IY18 1101 aa12.78□□□□□ -0.36
KCNMA1-264ENST00000639544 BSDC1Q9NW68 430 aaPredicted RBP12.78□□□□□ -0.36
KCNMA1-264ENST00000639544 SALL3Q9BXA9 1300 aa12.78□□□□□ -0.36
KCNMA1-264ENST00000639544 TIAM2Q8IVF5 1701 aa12.78□□□□□ -0.36
KCNMA1-264ENST00000639544 FBXO3Q9UK99 471 aa12.78□□□□□ -0.36
KCNMA1-264ENST00000639544 ZNF609O15014 1411 aa12.78□□□□□ -0.36
KCNMA1-264ENST00000639544 SRGAP3O43295 1099 aa12.77□□□□□ -0.36
KCNMA1-264ENST00000639544 CHMP4BQ9H444 224 aaKnown RBP12.77□□□□□ -0.36
KCNMA1-264ENST00000639544 HSP90B1P14625 803 aaKnown RBP12.77□□□□□ -0.37
KCNMA1-264ENST00000639544 FGFR2P21802 821 aa12.77□□□□□ -0.37
KCNMA1-264ENST00000639544 CCDC85AQ96PX6 553 aaPredicted RBP12.77□□□□□ -0.37
KCNMA1-264ENST00000639544 MYO5AQ9Y4I1 1855 aaKnown RBP12.76□□□□□ -0.37
KCNMA1-264ENST00000639544 ZBTB22O15209 634 aa12.76□□□□□ -0.37
KCNMA1-264ENST00000639544 PRELPP51888 382 aa12.76□□□□□ -0.37
KCNMA1-264ENST00000639544 OLFM4Q6UX06 510 aa12.76□□□□□ -0.37
KCNMA1-264ENST00000639544 PODXL2Q9NZ53 605 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms