RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 ZNF609O15014 1411 aa17.53■□□□□ 0.4
CHD1L-211ENST00000639534 CRKLP46109 303 aaKnown RBP17.52■□□□□ 0.4
CHD1L-211ENST00000639534 NEK4P51957 841 aa17.52■□□□□ 0.4
CHD1L-211ENST00000639534 HLFQ16534 295 aa17.52■□□□□ 0.4
CHD1L-211ENST00000639534 FAM98CQ17RN3 349 aaKnown RBP17.52■□□□□ 0.4
CHD1L-211ENST00000639534 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.52■□□□□ 0.4
CHD1L-211ENST00000639534 A0A0G2JS52 829 aa17.51■□□□□ 0.39
CHD1L-211ENST00000639534 PDE8AO60658 829 aa17.51■□□□□ 0.39
CHD1L-211ENST00000639534 NUCB2P80303 420 aa17.51■□□□□ 0.39
CHD1L-211ENST00000639534 FAM89AQ96GI7 184 aa17.51■□□□□ 0.39
CHD1L-211ENST00000639534 DBNDD2Q9BQY9 259 aa17.51■□□□□ 0.39
CHD1L-211ENST00000639534 TRMT112Q9UI30 125 aaKnown RBP17.51■□□□□ 0.39
CHD1L-211ENST00000639534 SPEF2Q9C093 1822 aa17.51■□□□□ 0.39
CHD1L-211ENST00000639534 THSD7AQ9UPZ6 1657 aa17.51■□□□□ 0.39
CHD1L-211ENST00000639534 NUP98P52948 1817 aa17.5■□□□□ 0.39
CHD1L-211ENST00000639534 ANKRD18BA2A2Z9 1011 aa17.5■□□□□ 0.39
CHD1L-211ENST00000639534 IRS4O14654 1257 aaPredicted RBP17.5■□□□□ 0.39
CHD1L-211ENST00000639534 CTSWP56202 376 aa17.5■□□□□ 0.39
CHD1L-211ENST00000639534 LRRFIP1Q32MZ4 808 aaKnown RBP17.5■□□□□ 0.39
CHD1L-211ENST00000639534 KCNB2Q92953 911 aa17.5■□□□□ 0.39
CHD1L-211ENST00000639534 GBP4Q96PP9 640 aa17.5■□□□□ 0.39
CHD1L-211ENST00000639534 USP21Q9UK80 565 aa17.5■□□□□ 0.39
CHD1L-211ENST00000639534 ZNF652Q9Y2D9 606 aa17.5■□□□□ 0.39
CHD1L-211ENST00000639534 ABCC12Q96J65 1359 aa17.5■□□□□ 0.39
CHD1L-211ENST00000639534 CCDC171Q6TFL3 1326 aa17.49■□□□□ 0.39
CHD1L-211ENST00000639534 DDX11L8A8MPP1 907 aa17.49■□□□□ 0.39
CHD1L-211ENST00000639534 GPTP24298 496 aa17.49■□□□□ 0.39
CHD1L-211ENST00000639534 NMIQ13287 307 aaPredicted RBP17.49■□□□□ 0.39
CHD1L-211ENST00000639534 RAB3GAP1Q15042 981 aa17.49■□□□□ 0.39
CHD1L-211ENST00000639534 CERKQ8TCT0 537 aa17.49■□□□□ 0.39
CHD1L-211ENST00000639534 NEUROD6Q96NK8 337 aa17.49■□□□□ 0.39
CHD1L-211ENST00000639534 TM6SF1Q9BZW5 370 aa17.49■□□□□ 0.39
CHD1L-211ENST00000639534 IL25Q9H293 177 aa17.49■□□□□ 0.39
CHD1L-211ENST00000639534 PALD1Q9ULE6 856 aa17.49■□□□□ 0.39
CHD1L-211ENST00000639534 TBC1D2BQ9UPU7 963 aa17.49■□□□□ 0.39
CHD1L-211ENST00000639534 COL5A3P25940 1745 aaPredicted RBP17.49■□□□□ 0.39
CHD1L-211ENST00000639534 ZKSCAN1P17029 563 aaPredicted RBP17.48■□□□□ 0.39
CHD1L-211ENST00000639534 ITPK1Q13572 414 aa17.48■□□□□ 0.39
CHD1L-211ENST00000639534 LRRC24Q50LG9 513 aa17.48■□□□□ 0.39
CHD1L-211ENST00000639534 RNF20Q5VTR2 975 aa17.48■□□□□ 0.39
CHD1L-211ENST00000639534 TTLL11Q8NHH1 800 aa17.48■□□□□ 0.39
CHD1L-211ENST00000639534 SNX14Q9Y5W7 946 aa17.48■□□□□ 0.39
CHD1L-211ENST00000639534 MED23Q9ULK4 1368 aa17.48■□□□□ 0.39
CHD1L-211ENST00000639534 A0A1B0GUL7 405 aa17.47■□□□□ 0.39
CHD1L-211ENST00000639534 MCM4P33991 863 aa17.47■□□□□ 0.39
CHD1L-211ENST00000639534 CCDC158Q5M9N0 1113 aa17.47■□□□□ 0.39
CHD1L-211ENST00000639534 CLEC4GQ6UXB4 293 aa17.47■□□□□ 0.39
CHD1L-211ENST00000639534 KBTBD3Q8NAB2 608 aa17.47■□□□□ 0.39
CHD1L-211ENST00000639534 INTS4Q96HW7 963 aaKnown RBP17.47■□□□□ 0.39
CHD1L-211ENST00000639534 ZNF594Q96JF6 807 aaPredicted RBP17.47■□□□□ 0.39
CHD1L-211ENST00000639534 SH3TC1Q8TE82 1336 aa17.47■□□□□ 0.39
CHD1L-211ENST00000639534 CNTNAP4Q9C0A0 1308 aa17.47■□□□□ 0.39
CHD1L-211ENST00000639534 NHSQ6T4R5 1651 aa17.46■□□□□ 0.39
CHD1L-211ENST00000639534 CAMTA2O94983 1202 aa17.46■□□□□ 0.39
CHD1L-211ENST00000639534 KCNJ4P48050 445 aa17.46■□□□□ 0.39
CHD1L-211ENST00000639534 CUL4AQ13619 759 aa17.46■□□□□ 0.39
CHD1L-211ENST00000639534 MAP4K1Q92918 833 aa17.46■□□□□ 0.39
CHD1L-211ENST00000639534 UTP14AQ9BVJ6 771 aaKnown RBP17.46■□□□□ 0.39
CHD1L-211ENST00000639534 HMG20BQ9P0W2 317 aa17.46■□□□□ 0.39
CHD1L-211ENST00000639534 MYH3P11055 1940 aa17.45■□□□□ 0.38
CHD1L-211ENST00000639534 RTL9Q8NET4 1388 aa17.45■□□□□ 0.38
CHD1L-211ENST00000639534 IFIT1P09914 478 aaKnown RBP17.45■□□□□ 0.38
CHD1L-211ENST00000639534 ITGA6P23229 1130 aa17.45■□□□□ 0.38
CHD1L-211ENST00000639534 PSMA5P28066 241 aa17.45■□□□□ 0.38
CHD1L-211ENST00000639534 NECTIN1Q15223 517 aa17.45■□□□□ 0.38
CHD1L-211ENST00000639534 GORABQ5T7V8 394 aa17.45■□□□□ 0.38
CHD1L-211ENST00000639534 RC3H1Q5TC82 1133 aaKnown RBP17.45■□□□□ 0.38
CHD1L-211ENST00000639534 MEX3CQ5U5Q3 659 aaKnown RBP17.45■□□□□ 0.38
CHD1L-211ENST00000639534 TMX3Q96JJ7 454 aa17.45■□□□□ 0.38
CHD1L-211ENST00000639534 DNAJC2Q99543 621 aaKnown RBP17.45■□□□□ 0.38
CHD1L-211ENST00000639534 PAG1Q9NWQ8 432 aa17.45■□□□□ 0.38
CHD1L-211ENST00000639534 UBN2Q6ZU65 1347 aa17.45■□□□□ 0.38
CHD1L-211ENST00000639534 LRP5O75197 1615 aa17.44■□□□□ 0.38
CHD1L-211ENST00000639534 BCORQ6W2J9 1755 aa17.44■□□□□ 0.38
CHD1L-211ENST00000639534 LDHAL6AQ6ZMR3 332 aa17.44■□□□□ 0.38
CHD1L-211ENST00000639534 CLEC17AQ6ZS10 378 aa17.44■□□□□ 0.38
CHD1L-211ENST00000639534 FAM227BQ96M60 508 aa17.44■□□□□ 0.38
CHD1L-211ENST00000639534 PUS3Q9BZE2 481 aaKnown RBP17.44■□□□□ 0.38
CHD1L-211ENST00000639534 HELLSQ9NRZ9 838 aa17.44■□□□□ 0.38
CHD1L-211ENST00000639534 RBM8AQ9Y5S9 174 aaKnown RBP17.44■□□□□ 0.38
CHD1L-211ENST00000639534 LAMB2P55268 1798 aa17.43■□□□□ 0.38
CHD1L-211ENST00000639534 A0A0D9SFI3 127 aa17.43■□□□□ 0.38
CHD1L-211ENST00000639534 KCNQ2O43526 872 aa17.43■□□□□ 0.38
CHD1L-211ENST00000639534 TIMM10P62072 90 aa17.43■□□□□ 0.38
CHD1L-211ENST00000639534 PTH1RQ03431 593 aa17.43■□□□□ 0.38
CHD1L-211ENST00000639534 KRT32Q14532 448 aa17.43■□□□□ 0.38
CHD1L-211ENST00000639534 MCMDC2Q4G0Z9 681 aa17.43■□□□□ 0.38
CHD1L-211ENST00000639534 METTL24Q5JXM2 366 aa17.43■□□□□ 0.38
CHD1L-211ENST00000639534 TTC39AQ5SRH9 613 aa17.43■□□□□ 0.38
CHD1L-211ENST00000639534 GREM2Q9H772 168 aa17.43■□□□□ 0.38
CHD1L-211ENST00000639534 CNNM1Q9NRU3 951 aa17.43■□□□□ 0.38
CHD1L-211ENST00000639534 RIPOR2Q9Y4F9 1068 aa17.43■□□□□ 0.38
CHD1L-211ENST00000639534 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
CHD1L-211ENST00000639534 MROH5Q6ZUA9 1318 aa17.43■□□□□ 0.38
CHD1L-211ENST00000639534 RIC1Q4ADV7 1423 aa17.42■□□□□ 0.38
CHD1L-211ENST00000639534 GOLGA6L22H0YM25 854 aa17.42■□□□□ 0.38
CHD1L-211ENST00000639534 ZFYP08048 801 aaPredicted RBP17.42■□□□□ 0.38
CHD1L-211ENST00000639534 DEKP35659 375 aaKnown RBP17.42■□□□□ 0.38
CHD1L-211ENST00000639534 ATP2B3Q16720 1220 aa17.42■□□□□ 0.38
CHD1L-211ENST00000639534 TSGA10IPQ3SY00 556 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms