RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 RABL6Q3YEC7 729 aaPredicted RBP12.69□□□□□ -0.38
NECAP1-216ENST00000639167 TOM1L2Q6ZVM7 507 aa12.69□□□□□ -0.38
NECAP1-216ENST00000639167 TSPY26PQ9H489 355 aa12.69□□□□□ -0.38
NECAP1-216ENST00000639167 SH2B1Q9NRF2 756 aaPredicted RBP12.69□□□□□ -0.38
NECAP1-216ENST00000639167 VPS37CA5D8V6 355 aaPredicted RBP12.68□□□□□ -0.38
NECAP1-216ENST00000639167 ATP5JP18859 108 aa12.68□□□□□ -0.38
NECAP1-216ENST00000639167 PSMA5P28066 241 aa12.68□□□□□ -0.38
NECAP1-216ENST00000639167 CASP7P55210 303 aa12.68□□□□□ -0.38
NECAP1-216ENST00000639167 PRDM11Q9NQV5 511 aa12.68□□□□□ -0.38
NECAP1-216ENST00000639167 SNRKQ9NRH2 765 aa12.68□□□□□ -0.38
NECAP1-216ENST00000639167 MTMR6Q9Y217 621 aa12.68□□□□□ -0.38
NECAP1-216ENST00000639167 PKD1L3Q7Z443 1732 aa12.68□□□□□ -0.38
NECAP1-216ENST00000639167 ARFGEF2Q9Y6D5 1785 aa12.67□□□□□ -0.38
NECAP1-216ENST00000639167 A1BGP04217 495 aa12.67□□□□□ -0.38
NECAP1-216ENST00000639167 BLOC1S2Q6QNY1 142 aa12.67□□□□□ -0.38
NECAP1-216ENST00000639167 CCDC129Q6ZRS4 1044 aa12.67□□□□□ -0.38
NECAP1-216ENST00000639167 ZCRB1Q8TBF4 217 aaKnown RBP12.67□□□□□ -0.38
NECAP1-216ENST00000639167 ABCC6O95255 1503 aa12.67□□□□□ -0.38
NECAP1-216ENST00000639167 TAF5LO75529 589 aa12.67□□□□□ -0.38
NECAP1-216ENST00000639167 DNM1Q05193 864 aaKnown RBP12.67□□□□□ -0.38
NECAP1-216ENST00000639167 PDE4CQ08493 712 aa12.67□□□□□ -0.38
NECAP1-216ENST00000639167 RNF20Q5VTR2 975 aa12.67□□□□□ -0.38
NECAP1-216ENST00000639167 BRINP3Q76B58 766 aa12.67□□□□□ -0.38
NECAP1-216ENST00000639167 DDX46Q7L014 1031 aaKnown RBP12.67□□□□□ -0.38
NECAP1-216ENST00000639167 ZSCAN30Q86W11 494 aa12.67□□□□□ -0.38
NECAP1-216ENST00000639167 TMEM87AQ8NBN3 555 aa12.67□□□□□ -0.38
NECAP1-216ENST00000639167 PDLIM2Q96JY6 352 aa12.67□□□□□ -0.38
NECAP1-216ENST00000639167 SEC62Q99442 399 aaKnown RBP12.67□□□□□ -0.38
NECAP1-216ENST00000639167 CPDO75976 1380 aa12.67□□□□□ -0.38
NECAP1-216ENST00000639167 COL15A1P39059 1388 aa12.67□□□□□ -0.38
NECAP1-216ENST00000639167 ZBTB3Q9H5J0 574 aa12.66□□□□□ -0.38
NECAP1-216ENST00000639167 GLI3P10071 1580 aa12.66□□□□□ -0.38
NECAP1-216ENST00000639167 RPS6KB1P23443 525 aa12.66□□□□□ -0.38
NECAP1-216ENST00000639167 FOXO4P98177 505 aa12.66□□□□□ -0.38
NECAP1-216ENST00000639167 STK3Q13188 491 aa12.66□□□□□ -0.38
NECAP1-216ENST00000639167 WDR17Q8IZU2 1322 aa12.65□□□□□ -0.38
NECAP1-216ENST00000639167 PCDH11XQ9BZA7 1347 aa12.65□□□□□ -0.38
NECAP1-216ENST00000639167 PCDH11YQ9BZA8 1340 aa12.65□□□□□ -0.38
NECAP1-216ENST00000639167 TOB2Q14106 344 aaPredicted RBP12.65□□□□□ -0.38
NECAP1-216ENST00000639167 NEUROD6Q96NK8 337 aa12.65□□□□□ -0.38
NECAP1-216ENST00000639167 ZNF609O15014 1411 aa12.65□□□□□ -0.39
NECAP1-216ENST00000639167 H7C1W4 665 aa12.64□□□□□ -0.39
NECAP1-216ENST00000639167 MSNP26038 577 aaKnown RBP12.64□□□□□ -0.39
NECAP1-216ENST00000639167 UBE2HP62256 183 aa12.64□□□□□ -0.39
NECAP1-216ENST00000639167 SLFNL1Q499Z3 407 aa12.64□□□□□ -0.39
NECAP1-216ENST00000639167 LARP1BQ659C4 914 aaKnown RBP12.64□□□□□ -0.39
NECAP1-216ENST00000639167 FERMT3Q86UX7 667 aa12.64□□□□□ -0.39
NECAP1-216ENST00000639167 ATP6V1DQ9Y5K8 247 aa12.64□□□□□ -0.39
NECAP1-216ENST00000639167 PHF14O94880 888 aa12.64□□□□□ -0.39
NECAP1-216ENST00000639167 CCDC183Q5T5S1 534 aa12.64□□□□□ -0.39
NECAP1-216ENST00000639167 ZNF594Q96JF6 807 aaPredicted RBP12.64□□□□□ -0.39
NECAP1-216ENST00000639167 HAUS7Q99871 368 aa12.64□□□□□ -0.39
NECAP1-216ENST00000639167 STRN4Q9NRL3 753 aa12.64□□□□□ -0.39
NECAP1-216ENST00000639167 CWC25Q9NXE8 425 aaPredicted RBP12.64□□□□□ -0.39
NECAP1-216ENST00000639167 JCADQ9P266 1359 aa12.64□□□□□ -0.39
NECAP1-216ENST00000639167 TIMM10P62072 90 aa12.63□□□□□ -0.39
NECAP1-216ENST00000639167 FAM173BQ6P4H8 233 aa12.63□□□□□ -0.39
NECAP1-216ENST00000639167 CDC37L1Q7L3B6 337 aa12.63□□□□□ -0.39
NECAP1-216ENST00000639167 ATG9AQ7Z3C6 839 aa12.63□□□□□ -0.39
NECAP1-216ENST00000639167 HMG20BQ9P0W2 317 aa12.63□□□□□ -0.39
NECAP1-216ENST00000639167 ZNF330Q9Y3S2 320 aaPredicted RBP12.63□□□□□ -0.39
NECAP1-216ENST00000639167 LAMB4A4D0S4 1761 aa12.63□□□□□ -0.39
NECAP1-216ENST00000639167 PLEKHG2Q9H7P9 1386 aa12.63□□□□□ -0.39
NECAP1-216ENST00000639167 ANKRD1Q15327 319 aa12.63□□□□□ -0.39
NECAP1-216ENST00000639167 LRRC24Q50LG9 513 aa12.63□□□□□ -0.39
NECAP1-216ENST00000639167 GOLIM4O00461 696 aa12.62□□□□□ -0.39
NECAP1-216ENST00000639167 USPL1Q5W0Q7 1092 aa12.62□□□□□ -0.39
NECAP1-216ENST00000639167 ERVV-2B6SEH9 535 aa12.62□□□□□ -0.39
NECAP1-216ENST00000639167 CYP21A2P08686 494 aa12.62□□□□□ -0.39
NECAP1-216ENST00000639167 IL2RBP14784 551 aa12.62□□□□□ -0.39
NECAP1-216ENST00000639167 MCMDC2Q4G0Z9 681 aa12.62□□□□□ -0.39
NECAP1-216ENST00000639167 NEK1Q96PY6 1258 aa12.62□□□□□ -0.39
NECAP1-216ENST00000639167 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.62□□□□□ -0.39
NECAP1-216ENST00000639167 TSGA10IPQ3SY00 556 aa12.61□□□□□ -0.39
NECAP1-216ENST00000639167 KBTBD3Q8NAB2 608 aa12.61□□□□□ -0.39
NECAP1-216ENST00000639167 PKNOX2Q96KN3 472 aa12.61□□□□□ -0.39
NECAP1-216ENST00000639167 LRRC2Q9BYS8 371 aa12.61□□□□□ -0.39
NECAP1-216ENST00000639167 PARP4Q9UKK3 1724 aaKnown RBP12.6□□□□□ -0.39
NECAP1-216ENST00000639167 HCLS1P14317 486 aaPredicted RBP12.6□□□□□ -0.39
NECAP1-216ENST00000639167 HSP90B1P14625 803 aaKnown RBP12.6□□□□□ -0.39
NECAP1-216ENST00000639167 HS1BP3Q53T59 392 aa12.6□□□□□ -0.39
NECAP1-216ENST00000639167 GIMAP6Q6P9H5 292 aa12.6□□□□□ -0.39
NECAP1-216ENST00000639167 Q6ZUG5 572 aa12.6□□□□□ -0.39
NECAP1-216ENST00000639167 PUS3Q9BZE2 481 aaKnown RBP12.6□□□□□ -0.39
NECAP1-216ENST00000639167 ALDH8A1Q9H2A2 487 aaPredicted RBP12.6□□□□□ -0.39
NECAP1-216ENST00000639167 PAG1Q9NWQ8 432 aa12.6□□□□□ -0.39
NECAP1-216ENST00000639167 NOL7Q9UMY1 257 aaKnown RBP12.6□□□□□ -0.39
NECAP1-216ENST00000639167 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
NECAP1-216ENST00000639167 COL5A2P05997 1499 aaPredicted RBP12.6□□□□□ -0.39
NECAP1-216ENST00000639167 KCPQ6ZWJ8 1503 aa12.6□□□□□ -0.39
NECAP1-216ENST00000639167 JAK2O60674 1132 aa12.6□□□□□ -0.39
NECAP1-216ENST00000639167 KRT32Q14532 448 aa12.6□□□□□ -0.39
NECAP1-216ENST00000639167 CSPP1Q1MSJ5 1256 aa12.6□□□□□ -0.39
NECAP1-216ENST00000639167 TTC6Q86TZ1 520 aa12.6□□□□□ -0.39
NECAP1-216ENST00000639167 CCDC85AQ96PX6 553 aaPredicted RBP12.6□□□□□ -0.39
NECAP1-216ENST00000639167 EYA2O00167 538 aa12.59□□□□□ -0.39
NECAP1-216ENST00000639167 IL15P40933 162 aaPredicted RBP12.59□□□□□ -0.39
NECAP1-216ENST00000639167 EVA1CP58658 441 aa12.59□□□□□ -0.39
NECAP1-216ENST00000639167 STOX1Q6ZVD7 989 aa12.59□□□□□ -0.39
NECAP1-216ENST00000639167 MPNDQ8N594 471 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms