RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 ATP10AO60312 1499 aa16.66■□□□□ 0.26
SCARB2-208ENST00000638372 CTAGE5O15320 804 aa16.66■□□□□ 0.26
SCARB2-208ENST00000638372 VAT1LQ9HCJ6 419 aa16.66■□□□□ 0.26
SCARB2-208ENST00000638372 TRMT1Q9NXH9 659 aaKnown RBP16.65■□□□□ 0.26
SCARB2-208ENST00000638372 STX8Q9UNK0 236 aa16.65■□□□□ 0.26
SCARB2-208ENST00000638372 ARHGAP29Q52LW3 1261 aa16.65■□□□□ 0.26
SCARB2-208ENST00000638372 DDX17Q92841 729 aaKnown RBP16.65■□□□□ 0.26
SCARB2-208ENST00000638372 USP19O94966 1318 aa16.65■□□□□ 0.26
SCARB2-208ENST00000638372 EPB41L2O43491 1005 aaKnown RBP16.65■□□□□ 0.26
SCARB2-208ENST00000638372 CYP7A1P22680 504 aa16.65■□□□□ 0.26
SCARB2-208ENST00000638372 RFC4P35249 363 aa16.65■□□□□ 0.26
SCARB2-208ENST00000638372 CCDC96Q2M329 555 aa16.65■□□□□ 0.26
SCARB2-208ENST00000638372 MAGI2Q86UL8 1455 aa16.64■□□□□ 0.25
SCARB2-208ENST00000638372 CREB3L3Q68CJ9 461 aa16.64■□□□□ 0.25
SCARB2-208ENST00000638372 DZIP3Q86Y13 1208 aaKnown RBP16.64■□□□□ 0.25
SCARB2-208ENST00000638372 FAM89AQ96GI7 184 aa16.64■□□□□ 0.25
SCARB2-208ENST00000638372 BLMP54132 1417 aaPredicted RBP16.64■□□□□ 0.25
SCARB2-208ENST00000638372 PTPN14Q15678 1187 aa16.64■□□□□ 0.25
SCARB2-208ENST00000638372 DTNBO60941 627 aa16.63■□□□□ 0.25
SCARB2-208ENST00000638372 SYCP1Q15431 976 aa16.63■□□□□ 0.25
SCARB2-208ENST00000638372 ANKRD18AQ8IVF6 992 aa16.63■□□□□ 0.25
SCARB2-208ENST00000638372 CPLX3Q8WVH0 158 aa16.63■□□□□ 0.25
SCARB2-208ENST00000638372 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.63■□□□□ 0.256e-6■■■■■ 38.2
SCARB2-208ENST00000638372 TARBP1Q13395 1621 aaKnown RBP16.63■□□□□ 0.25
SCARB2-208ENST00000638372 ZBTB43O43298 467 aa16.63■□□□□ 0.25
SCARB2-208ENST00000638372 RAB3GAP1Q15042 981 aa16.63■□□□□ 0.25
SCARB2-208ENST00000638372 ZSCAN16Q9H4T2 348 aaPredicted RBP16.63■□□□□ 0.25
SCARB2-208ENST00000638372 DACT1Q9NYF0 836 aa16.63■□□□□ 0.25
SCARB2-208ENST00000638372 TOP1P11387 765 aaKnown RBP16.63■□□□□ 0.25
SCARB2-208ENST00000638372 F13A1P00488 732 aa16.62■□□□□ 0.25
SCARB2-208ENST00000638372 WTAPQ15007 396 aa16.62■□□□□ 0.25
SCARB2-208ENST00000638372 LRSAM1Q6UWE0 723 aa16.62■□□□□ 0.25
SCARB2-208ENST00000638372 C16orf45Q96MC5 204 aaPredicted RBP16.62■□□□□ 0.25
SCARB2-208ENST00000638372 SLC4A4Q9Y6R1 1079 aa16.62■□□□□ 0.25
SCARB2-208ENST00000638372 IRS4O14654 1257 aaPredicted RBP16.62■□□□□ 0.25
SCARB2-208ENST00000638372 PDCL3Q9H2J4 239 aa16.62■□□□□ 0.25
SCARB2-208ENST00000638372 YEATS2Q9ULM3 1422 aa16.62■□□□□ 0.25
SCARB2-208ENST00000638372 PLEKHG3A1L390 1219 aa16.62■□□□□ 0.25
SCARB2-208ENST00000638372 ALG1Q9BT22 464 aa16.62■□□□□ 0.25
SCARB2-208ENST00000638372 PATL2C9JE40 543 aaKnown RBP16.61■□□□□ 0.25
SCARB2-208ENST00000638372 PDE4BQ07343 736 aa16.61■□□□□ 0.25
SCARB2-208ENST00000638372 ERCC4Q92889 916 aaPredicted RBP16.61■□□□□ 0.25
SCARB2-208ENST00000638372 SBNO2Q9Y2G9 1366 aa16.61■□□□□ 0.25
SCARB2-208ENST00000638372 NLRP3Q96P20 1036 aa16.61■□□□□ 0.25
SCARB2-208ENST00000638372 LUC7LQ9NQ29 371 aaKnown RBP16.61■□□□□ 0.25
SCARB2-208ENST00000638372 PRC1O43663 620 aa16.61■□□□□ 0.25
SCARB2-208ENST00000638372 A1BGP04217 495 aa16.61■□□□□ 0.25
SCARB2-208ENST00000638372 LDHCP07864 332 aa16.61■□□□□ 0.25
SCARB2-208ENST00000638372 PRIM1P49642 420 aaKnown RBP16.61■□□□□ 0.25
SCARB2-208ENST00000638372 C8orf37Q96NL8 207 aa16.61■□□□□ 0.25
SCARB2-208ENST00000638372 SETDB2Q96T68 719 aa16.61■□□□□ 0.25
SCARB2-208ENST00000638372 BAG3O95817 575 aa16.6■□□□□ 0.25
SCARB2-208ENST00000638372 APOBRQ0VD83 1088 aa16.6■□□□□ 0.25
SCARB2-208ENST00000638372 CCDC181Q5TID7 509 aa16.6■□□□□ 0.25
SCARB2-208ENST00000638372 BTG4Q9NY30 223 aa16.6■□□□□ 0.25
SCARB2-208ENST00000638372 STX1AQ16623 288 aa16.6■□□□□ 0.25
SCARB2-208ENST00000638372 AXDND1Q5T1B0 1012 aaPredicted RBP16.6■□□□□ 0.25
SCARB2-208ENST00000638372 UBXN4Q92575 508 aa16.6■□□□□ 0.25
SCARB2-208ENST00000638372 ZNF830Q96NB3 372 aaPredicted RBP16.6■□□□□ 0.25
SCARB2-208ENST00000638372 DBNDD2Q9BQY9 259 aa16.6■□□□□ 0.25
SCARB2-208ENST00000638372 TMEM2Q9UHN6 1383 aa16.6■□□□□ 0.25
SCARB2-208ENST00000638372 MARCKSP29966 332 aaPredicted RBP16.59■□□□□ 0.25
SCARB2-208ENST00000638372 RBM25P49756 843 aaKnown RBP16.59■□□□□ 0.25
SCARB2-208ENST00000638372 CCDC102BQ68D86 513 aa16.59■□□□□ 0.25
SCARB2-208ENST00000638372 GCC2Q8IWJ2 1684 aa16.59■□□□□ 0.25
SCARB2-208ENST00000638372 MIGA1Q8NAN2 632 aa16.59■□□□□ 0.25
SCARB2-208ENST00000638372 ZNF496Q96IT1 587 aaPredicted RBP16.59■□□□□ 0.25
SCARB2-208ENST00000638372 KAT14Q9H8E8 782 aa16.59■□□□□ 0.25
SCARB2-208ENST00000638372 NDUFB9Q9Y6M9 179 aa16.59■□□□□ 0.25
SCARB2-208ENST00000638372 HSP90AA4PQ58FG1 418 aa16.59■□□□□ 0.25
SCARB2-208ENST00000638372 TMC6Q7Z403 805 aa16.59■□□□□ 0.25
SCARB2-208ENST00000638372 SEPT11Q9NVA2 429 aaKnown RBP16.59■□□□□ 0.25
SCARB2-208ENST00000638372 CCDC171Q6TFL3 1326 aa16.59■□□□□ 0.25
SCARB2-208ENST00000638372 KIAA1328Q86T90 577 aa16.59■□□□□ 0.25
SCARB2-208ENST00000638372 UBAP1LF5GYI3 381 aa16.58■□□□□ 0.25
SCARB2-208ENST00000638372 RNF113AO15541 343 aaKnown RBP16.58■□□□□ 0.25
SCARB2-208ENST00000638372 IDEP14735 1019 aa16.58■□□□□ 0.25
SCARB2-208ENST00000638372 KIF5BP33176 963 aa16.58■□□□□ 0.25
SCARB2-208ENST00000638372 CCDC129Q6ZRS4 1044 aa16.58■□□□□ 0.25
SCARB2-208ENST00000638372 KCNQ3O43525 872 aa16.58■□□□□ 0.24
SCARB2-208ENST00000638372 SYT1P21579 422 aa16.58■□□□□ 0.24
SCARB2-208ENST00000638372 IL17REQ8NFR9 667 aa16.58■□□□□ 0.24
SCARB2-208ENST00000638372 UTP14AQ9BVJ6 771 aaKnown RBP16.58■□□□□ 0.24
SCARB2-208ENST00000638372 CRNKL1Q9BZJ0 848 aaKnown RBP16.58■□□□□ 0.24
SCARB2-208ENST00000638372 URI1O94763 535 aaPredicted RBP16.58■□□□□ 0.24
SCARB2-208ENST00000638372 RXRAP19793 462 aa16.58■□□□□ 0.24
SCARB2-208ENST00000638372 UBA7P41226 1012 aa16.58■□□□□ 0.24
SCARB2-208ENST00000638372 CDR1P51861 262 aa16.58■□□□□ 0.24
SCARB2-208ENST00000638372 NAA16Q6N069 864 aaPredicted RBP16.58■□□□□ 0.24
SCARB2-208ENST00000638372 SYKP43405 635 aa16.58■□□□□ 0.24
SCARB2-208ENST00000638372 ESR2Q92731 530 aa16.58■□□□□ 0.24
SCARB2-208ENST00000638372 TNNT1P13805 278 aa16.57■□□□□ 0.24
SCARB2-208ENST00000638372 TRMT1LQ7Z2T5 733 aaKnown RBP16.57■□□□□ 0.24
SCARB2-208ENST00000638372 KIF18AQ8NI77 898 aa16.57■□□□□ 0.24
SCARB2-208ENST00000638372 ZNF594Q96JF6 807 aaPredicted RBP16.57■□□□□ 0.24
SCARB2-208ENST00000638372 METTL22Q9BUU2 404 aaPredicted RBP16.57■□□□□ 0.24
SCARB2-208ENST00000638372 UBA5Q9GZZ9 404 aa16.57■□□□□ 0.24
SCARB2-208ENST00000638372 FAM227BQ96M60 508 aa16.57■□□□□ 0.24
SCARB2-208ENST00000638372 ENOX2Q16206 610 aaKnown RBP16.57■□□□□ 0.24
SCARB2-208ENST00000638372 SLF2Q8IX21 1173 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms