RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 EID1Q9Y6B2 187 aa3.49□□□□□ -1.85
HMHB1-202ENST00000638299 SERTM1A2A2V5 107 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 PRC1O43663 620 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 LILRA1O75019 489 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 TNFRSF21O75509 655 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 ADH1BP00325 375 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 GARTP22102 1010 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 PAX3P23760 479 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 GBP2P32456 591 aaPredicted RBP3.48□□□□□ -1.85
HMHB1-202ENST00000638299 EIF4A3P38919 411 aaKnown RBP3.48□□□□□ -1.85
HMHB1-202ENST00000638299 SOX9P48436 509 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 SEPT6Q14141 434 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 LRRC41Q15345 812 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 FOXD4L6Q3SYB3 417 aaPredicted RBP3.48□□□□□ -1.85
HMHB1-202ENST00000638299 BRDTQ58F21 947 aaPredicted RBP3.48□□□□□ -1.85
HMHB1-202ENST00000638299 VARS2Q5ST30 1063 aaKnown RBP3.48□□□□□ -1.85
HMHB1-202ENST00000638299 FBXL19Q6PCT2 694 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 FOXD4L3Q6VB84 417 aaPredicted RBP3.48□□□□□ -1.85
HMHB1-202ENST00000638299 VASH1Q7L8A9 365 aaPredicted RBP3.48□□□□□ -1.85
HMHB1-202ENST00000638299 HOMER1Q86YM7 354 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 TRPM4Q8TD43 1214 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 CPLX3Q8WVH0 158 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 RPS6KC1Q96S38 1066 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 RSRP1Q9BUV0 290 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 PHACTR1Q9C0D0 580 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 ZFYVE28Q9HCC9 887 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 HOMER2Q9NSB8 354 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 TMEM260Q9NX78 707 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 UBP1Q9NZI7 540 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 BCCIPQ9P287 314 aaKnown RBP eCLIP3.48□□□□□ -1.85
HMHB1-202ENST00000638299 PRKAG3Q9UGI9 489 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 ZNF232Q9UNY5 417 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 TLR6Q9Y2C9 796 aa3.48□□□□□ -1.85
HMHB1-202ENST00000638299 SOWAHBA6NEL2 793 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 CDK2AP1O14519 115 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 GIPC1O14908 333 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 GADD45BO75293 160 aaPredicted RBP3.47□□□□□ -1.85
HMHB1-202ENST00000638299 FBXO24O75426 580 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 CENPBP07199 599 aaPredicted RBP3.47□□□□□ -1.85
HMHB1-202ENST00000638299 BIRC2Q13490 618 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 FAM50AQ14320 339 aaKnown RBP3.47□□□□□ -1.85
HMHB1-202ENST00000638299 TLR1Q15399 786 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 TEAD4Q15561 434 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 RTN1Q16799 776 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 DALRD3Q5D0E6 543 aaKnown RBP3.47□□□□□ -1.85
HMHB1-202ENST00000638299 PCNX4Q63HM2 1172 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 KANK3Q6NY19 840 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 RELL1Q8IUW5 271 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 ZNF295-AS1Q8N0V1 137 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 L3MBTL2Q969R5 705 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 XAGE2Q96GT9 111 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 SLC39A13Q96H72 371 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 SHDQ96IW2 340 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 CCDC113Q9H0I3 377 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 ARHGEF10LQ9HCE6 1279 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 CHST12Q9NRB3 414 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 TYW1Q9NV66 732 aaKnown RBP3.47□□□□□ -1.85
HMHB1-202ENST00000638299 WBP1LQ9NX94 342 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 CABP1Q9NZU7 370 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 TSR3Q9UJK0 312 aaKnown RBP3.47□□□□□ -1.85
HMHB1-202ENST00000638299 CDV3Q9UKY7 258 aaKnown RBP3.47□□□□□ -1.85
HMHB1-202ENST00000638299 PPT2Q9UMR5 302 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 HRH3Q9Y5N1 445 aa3.47□□□□□ -1.85
HMHB1-202ENST00000638299 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.47□□□□□ -1.85
HMHB1-202ENST00000638299 EREGO14944 169 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 PDPK1O15530 556 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 DIAPH1O60610 1272 aaKnown RBP3.46□□□□□ -1.86
HMHB1-202ENST00000638299 ZPR1O75312 459 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 EIF3JO75822 258 aaKnown RBP3.46□□□□□ -1.86
HMHB1-202ENST00000638299 MICAL2O94851 1124 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 ASMTLO95671 621 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 GNRH1P01148 92 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 PF4P02776 101 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 NEFLP07196 543 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 VIL1P09327 827 aaKnown RBP3.46□□□□□ -1.86
HMHB1-202ENST00000638299 PCSK2P16519 638 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 TXLNAP40222 546 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 CRKP46108 304 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 WNT7BP56706 349 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 SKOR1P84550 965 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 GRM2Q14416 872 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 ARID5BQ14865 1188 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 RALBP1Q15311 655 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 CTC1Q2NKJ3 1217 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 ARSHQ5FYA8 562 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 C1orf53Q5VUE5 145 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 TSHZ1Q6ZSZ6 1077 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 C16orf86Q6ZW13 317 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 LRP10Q7Z4F1 713 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 CCAR1Q8IX12 1150 aaKnown RBP3.46□□□□□ -1.86
HMHB1-202ENST00000638299 GLIS3Q8NEA6 775 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 C8orf48Q96LL4 319 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 TMEM74Q96NL1 305 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 NOC4LQ9BVI4 516 aaKnown RBP3.46□□□□□ -1.86
HMHB1-202ENST00000638299 NT5C1AQ9BXI3 368 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 SRRTQ9BXP5 876 aaKnown RBP3.46□□□□□ -1.86
HMHB1-202ENST00000638299 TMEM63CQ9P1W3 806 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 PFDN2Q9UHV9 154 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 PNMA2Q9UL42 364 aa3.46□□□□□ -1.86
HMHB1-202ENST00000638299 FCF1Q9Y324 198 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms