RNA–Protein interactions for RNA: ENST00000638249.1

KCNMA1-229, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-229ENST00000638249 ZBTB38Q8NAP3 1195 aaPredicted RBP19.04■□□□□ 0.64
KCNMA1-229ENST00000638249 CELF1Q92879 486 aaKnown RBP19.04■□□□□ 0.64
KCNMA1-229ENST00000638249 ZNF521Q96K83 1311 aa19.03■□□□□ 0.64
KCNMA1-229ENST00000638249 CCDC191Q8NCU4 936 aa19.03■□□□□ 0.64
KCNMA1-229ENST00000638249 SMC1BQ8NDV3 1235 aa19.03■□□□□ 0.64
KCNMA1-229ENST00000638249 VAMP4O75379 141 aa19.02■□□□□ 0.64
KCNMA1-229ENST00000638249 DDX58O95786 925 aaKnown RBP19.02■□□□□ 0.64
KCNMA1-229ENST00000638249 APLP1P51693 650 aa19.02■□□□□ 0.64
KCNMA1-229ENST00000638249 AOC3Q16853 763 aa19.02■□□□□ 0.64
KCNMA1-229ENST00000638249 KSR2Q6VAB6 950 aa19.02■□□□□ 0.64
KCNMA1-229ENST00000638249 SP8Q8IXZ3 490 aa19.02■□□□□ 0.64
KCNMA1-229ENST00000638249 STK31Q9BXU1 1019 aa19.02■□□□□ 0.64
KCNMA1-229ENST00000638249 CACNA1FO60840 1977 aa19.02■□□□□ 0.64
KCNMA1-229ENST00000638249 BBOX1O75936 387 aa19.01■□□□□ 0.63
KCNMA1-229ENST00000638249 SLC4A2P04920 1241 aa19.01■□□□□ 0.63
KCNMA1-229ENST00000638249 PCCAP05165 728 aaPredicted RBP19.01■□□□□ 0.63
KCNMA1-229ENST00000638249 GRIPAP1Q4V328 841 aa19.01■□□□□ 0.63
KCNMA1-229ENST00000638249 LARGE2Q8N3Y3 721 aa19.01■□□□□ 0.63
KCNMA1-229ENST00000638249 RTFDC1Q9BY42 306 aaPredicted RBP19.01■□□□□ 0.63
KCNMA1-229ENST00000638249 CWC25Q9NXE8 425 aaPredicted RBP19.01■□□□□ 0.63
KCNMA1-229ENST00000638249 MYH3P11055 1940 aa19.01■□□□□ 0.63
KCNMA1-229ENST00000638249 SPEF2Q9C093 1822 aa19■□□□□ 0.63
KCNMA1-229ENST00000638249 CWF19L2Q2TBE0 894 aaKnown RBP19■□□□□ 0.63
KCNMA1-229ENST00000638249 JDP2Q8WYK2 163 aa19■□□□□ 0.63
KCNMA1-229ENST00000638249 TAF1DQ9H5J8 278 aaPredicted RBP19■□□□□ 0.63
KCNMA1-229ENST00000638249 SEC31BQ9NQW1 1179 aa19■□□□□ 0.63
KCNMA1-229ENST00000638249 PCNTO95613 3336 aa18.99■□□□□ 0.63
KCNMA1-229ENST00000638249 PPIP5K2O43314 1243 aa18.99■□□□□ 0.63
KCNMA1-229ENST00000638249 FLIIQ13045 1269 aa18.99■□□□□ 0.63
KCNMA1-229ENST00000638249 DPP8Q6V1X1 898 aaPredicted RBP18.99■□□□□ 0.63
KCNMA1-229ENST00000638249 DNAJC5GQ8N7S2 189 aa18.99■□□□□ 0.63
KCNMA1-229ENST00000638249 CHMP4AQ9BY43 222 aa18.99■□□□□ 0.63
KCNMA1-229ENST00000638249 GPC2Q8N158 579 aa18.98■□□□□ 0.63
KCNMA1-229ENST00000638249 MPNDQ8N594 471 aa18.98■□□□□ 0.63
KCNMA1-229ENST00000638249 NEURL1BA8MQ27 555 aa18.97■□□□□ 0.63
KCNMA1-229ENST00000638249 CCDC85AQ96PX6 553 aaPredicted RBP18.97■□□□□ 0.63
KCNMA1-229ENST00000638249 CDHR2Q9BYE9 1310 aa18.97■□□□□ 0.63
KCNMA1-229ENST00000638249 IQCA1LA6NCM1 817 aa18.96■□□□□ 0.63
KCNMA1-229ENST00000638249 NIM1KQ8IY84 436 aa18.96■□□□□ 0.63
KCNMA1-229ENST00000638249 GJA3Q9Y6H8 435 aa18.96■□□□□ 0.63
KCNMA1-229ENST00000638249 PDE8AO60658 829 aa18.95■□□□□ 0.62
KCNMA1-229ENST00000638249 SCNN1DP51172 638 aa18.95■□□□□ 0.62
KCNMA1-229ENST00000638249 EIF6P56537 245 aaKnown RBP18.95■□□□□ 0.62
KCNMA1-229ENST00000638249 GPSM2P81274 684 aa18.95■□□□□ 0.62
KCNMA1-229ENST00000638249 KIAA2012Q0VF49 1180 aa18.95■□□□□ 0.62
KCNMA1-229ENST00000638249 TMC4Q7Z404 712 aa18.95■□□□□ 0.62
KCNMA1-229ENST00000638249 TMX4Q9H1E5 349 aaPredicted RBP18.95■□□□□ 0.62
KCNMA1-229ENST00000638249 HACL1Q9UJ83 578 aa18.95■□□□□ 0.62
KCNMA1-229ENST00000638249 EPHX2P34913 555 aa18.94■□□□□ 0.62
KCNMA1-229ENST00000638249 FKBP5Q13451 457 aaPredicted RBP18.94■□□□□ 0.62
KCNMA1-229ENST00000638249 CHADLQ6NUI6 762 aa18.94■□□□□ 0.62
KCNMA1-229ENST00000638249 SUPT20HQ8NEM7 779 aa18.94■□□□□ 0.62
KCNMA1-229ENST00000638249 GPR101Q96P66 508 aaPredicted RBP18.94■□□□□ 0.62
KCNMA1-229ENST00000638249 MYH16Q9H6N6 1097 aa18.94■□□□□ 0.62
KCNMA1-229ENST00000638249 YDJCA8MPS7 323 aa18.93■□□□□ 0.62
KCNMA1-229ENST00000638249 CTSWP56202 376 aa18.93■□□□□ 0.62
KCNMA1-229ENST00000638249 NEXNQ0ZGT2 675 aa18.93■□□□□ 0.62
KCNMA1-229ENST00000638249 DNAAF4Q8WXU2 420 aa18.93■□□□□ 0.62
KCNMA1-229ENST00000638249 VPS33BQ9H267 617 aa18.93■□□□□ 0.62
KCNMA1-229ENST00000638249 POLLQ9UGP5 575 aa18.93■□□□□ 0.62
KCNMA1-229ENST00000638249 F6X3S4 739 aa18.93■□□□□ 0.62
KCNMA1-229ENST00000638249 CASP7P55210 303 aa18.93■□□□□ 0.62
KCNMA1-229ENST00000638249 RPS8P62241 208 aaKnown RBP18.93■□□□□ 0.62
KCNMA1-229ENST00000638249 CXCL9Q07325 125 aa18.93■□□□□ 0.62
KCNMA1-229ENST00000638249 CCDC152Q4G0S7 254 aa18.93■□□□□ 0.62
KCNMA1-229ENST00000638249 EAPPQ56P03 285 aaPredicted RBP18.93■□□□□ 0.62
KCNMA1-229ENST00000638249 UBE3BQ7Z3V4 1068 aa18.93■□□□□ 0.62
KCNMA1-229ENST00000638249 LDHDQ86WU2 507 aa18.93■□□□□ 0.62
KCNMA1-229ENST00000638249 ZNRF3Q9ULT6 936 aa18.93■□□□□ 0.62
KCNMA1-229ENST00000638249 NSFL1CQ9UNZ2 370 aaKnown RBP18.93■□□□□ 0.62
KCNMA1-229ENST00000638249 SCN9AQ15858 1988 aa18.92■□□□□ 0.62
KCNMA1-229ENST00000638249 EPS15P42566 896 aa18.92■□□□□ 0.62
KCNMA1-229ENST00000638249 GCKRQ14397 625 aa18.92■□□□□ 0.62
KCNMA1-229ENST00000638249 PASKQ96RG2 1323 aa18.91■□□□□ 0.62
KCNMA1-229ENST00000638249 H7C1W4 665 aa18.91■□□□□ 0.62
KCNMA1-229ENST00000638249 TTLL11Q8NHH1 800 aa18.91■□□□□ 0.62
KCNMA1-229ENST00000638249 GREM2Q9H772 168 aa18.91■□□□□ 0.62
KCNMA1-229ENST00000638249 RAD17O75943 681 aa18.9■□□□□ 0.62
KCNMA1-229ENST00000638249 TBC1D16Q8TBP0 767 aa18.9■□□□□ 0.62
KCNMA1-229ENST00000638249 KLRG1Q96E93 195 aa18.9■□□□□ 0.62
KCNMA1-229ENST00000638249 RTL9Q8NET4 1388 aa18.89■□□□□ 0.61
KCNMA1-229ENST00000638249 A0A1B0GUL6 1792 aa18.89■□□□□ 0.61
KCNMA1-229ENST00000638249 HSP90B1P14625 803 aaKnown RBP18.89■□□□□ 0.61
KCNMA1-229ENST00000638249 LINS1Q8NG48 757 aa18.89■□□□□ 0.61
KCNMA1-229ENST00000638249 DBNDD1Q9H9R9 158 aa18.89■□□□□ 0.61
KCNMA1-229ENST00000638249 WTIPA6NIX2 430 aaPredicted RBP18.88■□□□□ 0.61
KCNMA1-229ENST00000638249 C6orf229H3BNL8 230 aa18.88■□□□□ 0.61
KCNMA1-229ENST00000638249 RIMBP2O15034 1052 aa18.88■□□□□ 0.61
KCNMA1-229ENST00000638249 ITGBL1O95965 494 aaPredicted RBP18.88■□□□□ 0.61
KCNMA1-229ENST00000638249 WASHC4Q2M389 1173 aa18.88■□□□□ 0.61
KCNMA1-229ENST00000638249 BEND3Q5T5X7 828 aa18.88■□□□□ 0.61
KCNMA1-229ENST00000638249 PODXL2Q9NZ53 605 aa18.88■□□□□ 0.61
KCNMA1-229ENST00000638249 ZNF646O15015 1829 aaPredicted RBP18.88■□□□□ 0.61
KCNMA1-229ENST00000638249 PSME4Q14997 1843 aa18.88■□□□□ 0.61
KCNMA1-229ENST00000638249 SHTN1A0MZ66 631 aa18.87■□□□□ 0.61
KCNMA1-229ENST00000638249 GMPSP49915 693 aaPredicted RBP18.87■□□□□ 0.61
KCNMA1-229ENST00000638249 MAP1SQ66K74 1059 aaPredicted RBP18.87■□□□□ 0.61
KCNMA1-229ENST00000638249 CIAPIN1Q6FI81 312 aa18.87■□□□□ 0.61
KCNMA1-229ENST00000638249 CDCA7LQ96GN5 454 aa18.87■□□□□ 0.61
KCNMA1-229ENST00000638249 PLA2G12BQ9BX93 195 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms