RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	NIF3L1	Q9GZT8	377 aa		2.08	□□□□□ -2.08
MECP2-222	ENST00000637533	UNC93B1	Q9H1C4	597 aa		2.08	□□□□□ -2.08
MECP2-222	ENST00000637533	ACBD3	Q9H3P7	528 aa		2.08	□□□□□ -2.08
MECP2-222	ENST00000637533	ZHX3	Q9H4I2	956 aa		2.08	□□□□□ -2.08
MECP2-222	ENST00000637533	CAAP1	Q9H8G2	361 aa		2.08	□□□□□ -2.08
MECP2-222	ENST00000637533	ARHGEF10L	Q9HCE6	1279 aa		2.08	□□□□□ -2.08
MECP2-222	ENST00000637533	ZNF358	Q9NW07	568 aa		2.08	□□□□□ -2.08
MECP2-222	ENST00000637533	SCHIP1	Q9P0W5	487 aa	Predicted RBP	2.08	□□□□□ -2.08
MECP2-222	ENST00000637533	ZNF232	Q9UNY5	417 aa		2.08	□□□□□ -2.08
MECP2-222	ENST00000637533	LHX6	Q9UPM6	363 aa		2.08	□□□□□ -2.08
MECP2-222	ENST00000637533	PCDHGA11	Q9Y5H2	935 aa		2.08	□□□□□ -2.08
MECP2-222	ENST00000637533	EMILIN1	Q9Y6C2	1016 aa		2.08	□□□□□ -2.08
MECP2-222	ENST00000637533	GJA3	Q9Y6H8	435 aa		2.08	□□□□□ -2.08
MECP2-222	ENST00000637533	PHF20L1	A8MW92	1017 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	TGFBR3L	H3BV60	316 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	OPLAH	O14841	1288 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	PER1	O15534	1290 aa	Predicted RBP	2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	BRINP1	O60477	761 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	UPP2	O95045	317 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	CD2BP2	O95400	341 aa	Known RBP	2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	NBPF7	P0C2Y1	421 aa	Predicted RBP	2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	HOXB1	P14653	301 aa	Predicted RBP	2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	COL9A1	P20849	921 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	GPC1	P35052	558 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	SOX9	P48436	509 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	OCRL	Q01968	901 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	GUCA2A	Q02747	115 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	APOBR	Q0VD83	1088 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	RAPGEF1	Q13905	1077 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	PDE1C	Q14123	709 aa	Predicted RBP	2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	NAA30	Q147X3	362 aa	Predicted RBP	2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	CCDC85B	Q15834	202 aa	Predicted RBP	2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	C8orf34	Q49A92	452 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	MTERF2	Q49AM1	385 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	ERFE	Q4G0M1	354 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	ARSI	Q5FYB1	569 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	TMEM67	Q5HYA8	995 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	SNAP47	Q5SQN1	464 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	TTC39B	Q5VTQ0	682 aa	Predicted RBP	2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	SPTY2D1	Q68D10	685 aa	Predicted RBP	2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	PPP4R4	Q6NUP7	873 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	TMEM92	Q6UXU6	159 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	ANKS3	Q6ZW76	656 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	EEPD1	Q7L9B9	569 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	ZNF438	Q7Z4V0	828 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	MCF2L2	Q86YR7	1114 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	SCUBE3	Q8IX30	993 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	SMAP1	Q8IYB5	467 aa	Predicted RBP	2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	REXO1	Q8N1G1	1221 aa	Known RBP	2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	CCDC24	Q8N4L8	307 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	CEP120	Q8N960	986 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	ZNF511	Q8NB15	262 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	TSEN2	Q8NCE0	465 aa	Known RBP	2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	EPS8L1	Q8TE68	723 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	ZNF526	Q8TF50	670 aa	Predicted RBP	2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	JDP2	Q8WYK2	163 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	NKD1	Q969G9	470 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	TTC17	Q96AE7	1141 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	IFT43	Q96FT9	208 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	SGSM3	Q96HU1	749 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	ZFR	Q96KR1	1074 aa	Known RBP	2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	TMEM74	Q96NL1	305 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	SPOCK3	Q9BQ16	436 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	SENP7	Q9BQF6	1050 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	CSRNP2	Q9H175	543 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	SUV39H2	Q9H5I1	410 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	ANO2	Q9NQ90	1003 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	PRDM11	Q9NQV5	511 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	TOMM22	Q9NS69	142 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	INTS7	Q9NVH2	962 aa	Known RBP	2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	ZDHHC3	Q9NYG2	299 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	ACTR10	Q9NZ32	417 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	DACH1	Q9UI36	760 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	MAPRE3	Q9UPY8	281 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	TRPC6	Q9Y210	931 aa		2.07	□□□□□ -2.08
MECP2-222	ENST00000637533	FAM170A	A1A519	330 aa		2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	CARNS1	A5YM72	827 aa		2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	PDPK1	O15530	556 aa		2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	FZD6	O60353	706 aa		2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	EFCAB14	O75071	495 aa		2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	RFPL3	O75679	317 aa		2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	PDGFA	P04085	211 aa		2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	NEFM	P07197	916 aa		2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	VIL1	P09327	827 aa	Known RBP	2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	USP17L7	P0C7H9	530 aa		2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	MCC	P23508	829 aa		2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	GBP2	P32456	591 aa	Predicted RBP	2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	EIF4A3	P38919	411 aa	Known RBP	2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	CCT5	P48643	541 aa		2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	NAP1L1	P55209	391 aa	Known RBP	2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	TBX4	P57082	545 aa		2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	LMNB2	Q03252	620 aa		2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	BTK	Q06187	659 aa		2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	PICALM	Q13492	652 aa		2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	SERINC3	Q13530	473 aa		2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	SART3	Q15020	963 aa	Known RBP	2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	MTFR1	Q15390	333 aa		2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	TLR1	Q15399	786 aa		2.06	□□□□□ -2.08
MECP2-222	ENST00000637533	GFOD2	Q3B7J2	385 aa		2.06	□□□□□ -2.08

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms