RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 TLR7Q9NYK1 1049 aaKnown RBP17.28■□□□□ 0.36
CLN6-215ENST00000636674 PRAMEF22A3QJZ6 481 aa17.28■□□□□ 0.36
CLN6-215ENST00000636674 TOB2Q14106 344 aaPredicted RBP17.28■□□□□ 0.36
CLN6-215ENST00000636674 LARP1Q6PKG0 1096 aaKnown RBP17.28■□□□□ 0.36
CLN6-215ENST00000636674 RBM43Q6ZSC3 357 aaKnown RBP17.28■□□□□ 0.36
CLN6-215ENST00000636674 ANKRD24Q8TF21 1146 aa17.28■□□□□ 0.36
CLN6-215ENST00000636674 CCDC8Q9H0W5 538 aaPredicted RBP17.28■□□□□ 0.36
CLN6-215ENST00000636674 NUP62CLQ9H1M0 184 aa17.28■□□□□ 0.36
CLN6-215ENST00000636674 RGPD5Q99666 1765 aa17.27■□□□□ 0.36
CLN6-215ENST00000636674 AP5Z1O43299 807 aa17.27■□□□□ 0.36
CLN6-215ENST00000636674 KRT32Q14532 448 aa17.27■□□□□ 0.36
CLN6-215ENST00000636674 MAP3K11Q16584 847 aa17.27■□□□□ 0.36
CLN6-215ENST00000636674 ESCO1Q5FWF5 840 aa17.27■□□□□ 0.36
CLN6-215ENST00000636674 ZNF830Q96NB3 372 aaPredicted RBP17.27■□□□□ 0.36
CLN6-215ENST00000636674 KIF1AQ12756 1690 aa17.27■□□□□ 0.35
CLN6-215ENST00000636674 NPHP3Q7Z494 1330 aa17.27■□□□□ 0.35
CLN6-215ENST00000636674 MYH15Q9Y2K3 1946 aa17.26■□□□□ 0.35
CLN6-215ENST00000636674 DDX19AQ9NUU7 478 aaKnown RBP17.26■□□□□ 0.35
CLN6-215ENST00000636674 PLEKHG2Q9H7P9 1386 aa17.26■□□□□ 0.35
CLN6-215ENST00000636674 AFDNP55196 1824 aaKnown RBP17.26■□□□□ 0.35
CLN6-215ENST00000636674 NEURL1BA8MQ27 555 aa17.26■□□□□ 0.35
CLN6-215ENST00000636674 GOLGA6L6A8MZA4 724 aa17.26■□□□□ 0.35
CLN6-215ENST00000636674 DNTTIP2Q5QJE6 756 aaKnown RBP17.26■□□□□ 0.35
CLN6-215ENST00000636674 KIAA1524Q8TCG1 905 aa17.26■□□□□ 0.35
CLN6-215ENST00000636674 BOLA2Q9H3K6 86 aa17.26■□□□□ 0.35
CLN6-215ENST00000636674 COPRSQ9NQ92 184 aa17.26■□□□□ 0.35
CLN6-215ENST00000636674 TAF5LO75529 589 aa17.25■□□□□ 0.35
CLN6-215ENST00000636674 COL9A3Q14050 684 aaPredicted RBP17.25■□□□□ 0.35
CLN6-215ENST00000636674 ZBTB7CA1YPR0 619 aa17.25■□□□□ 0.35
CLN6-215ENST00000636674 ATP5JP18859 108 aa17.25■□□□□ 0.35
CLN6-215ENST00000636674 TYRO3Q06418 890 aa17.25■□□□□ 0.35
CLN6-215ENST00000636674 NEXNQ0ZGT2 675 aa17.25■□□□□ 0.35
CLN6-215ENST00000636674 GCKRQ14397 625 aa17.25■□□□□ 0.35
CLN6-215ENST00000636674 ZNF589Q86UQ0 364 aaPredicted RBP17.25■□□□□ 0.35
CLN6-215ENST00000636674 DDX54Q8TDD1 881 aaKnown RBP17.25■□□□□ 0.35
CLN6-215ENST00000636674 KCNF1Q9H3M0 494 aa17.25■□□□□ 0.35
CLN6-215ENST00000636674 MRVI1Q9Y6F6 885 aa17.25■□□□□ 0.35
CLN6-215ENST00000636674 ARFGEF2Q9Y6D5 1785 aa17.25■□□□□ 0.35
CLN6-215ENST00000636674 KDM6AO15550 1401 aaPredicted RBP17.24■□□□□ 0.35
CLN6-215ENST00000636674 LIG1P18858 919 aa17.24■□□□□ 0.35
CLN6-215ENST00000636674 METTL22Q9BUU2 404 aaPredicted RBP17.24■□□□□ 0.35
CLN6-215ENST00000636674 ALS2Q96Q42 1657 aa17.23■□□□□ 0.35
CLN6-215ENST00000636674 RIC3Q7Z5B4 369 aa17.23■□□□□ 0.35
CLN6-215ENST00000636674 GTF3C6Q969F1 213 aa17.23■□□□□ 0.35
CLN6-215ENST00000636674 ZMYND15Q9H091 742 aa17.23■□□□□ 0.35
CLN6-215ENST00000636674 TAF6LQ9Y6J9 622 aa17.23■□□□□ 0.35
CLN6-215ENST00000636674 LAMB4A4D0S4 1761 aa17.23■□□□□ 0.35
CLN6-215ENST00000636674 ZNF790Q6PG37 636 aa17.23■□□□□ 0.35
CLN6-215ENST00000636674 LEO1Q8WVC0 666 aaPredicted RBP17.23■□□□□ 0.35
CLN6-215ENST00000636674 CLSTN2Q9H4D0 955 aa17.23■□□□□ 0.35
CLN6-215ENST00000636674 RFX5P48382 616 aaPredicted RBP17.22■□□□□ 0.35
CLN6-215ENST00000636674 TPRNQ4KMQ1 711 aa17.22■□□□□ 0.35
CLN6-215ENST00000636674 FERMT3Q86UX7 667 aa17.22■□□□□ 0.35
CLN6-215ENST00000636674 MPNDQ8N594 471 aa17.22■□□□□ 0.35
CLN6-215ENST00000636674 SPATA32Q96LK8 384 aa17.22■□□□□ 0.35
CLN6-215ENST00000636674 SIL1Q9H173 461 aa17.22■□□□□ 0.35
CLN6-215ENST00000636674 ERBB3P21860 1342 aa17.22■□□□□ 0.35
CLN6-215ENST00000636674 LAMA4Q16363 1823 aa17.22■□□□□ 0.35
CLN6-215ENST00000636674 AIMP1Q12904 312 aaKnown RBP17.21■□□□□ 0.35
CLN6-215ENST00000636674 RABL6Q3YEC7 729 aaPredicted RBP17.21■□□□□ 0.35
CLN6-215ENST00000636674 TNMDQ9H2S6 317 aa17.21■□□□□ 0.35
CLN6-215ENST00000636674 SLC52A2Q9HAB3 445 aa17.21■□□□□ 0.35
CLN6-215ENST00000636674 DTNBO60941 627 aa17.21■□□□□ 0.35
CLN6-215ENST00000636674 EPHA10Q5JZY3 1008 aa17.21■□□□□ 0.35
CLN6-215ENST00000636674 LRP10Q7Z4F1 713 aa17.21■□□□□ 0.35
CLN6-215ENST00000636674 ORAI2Q96SN7 254 aa17.21■□□□□ 0.35
CLN6-215ENST00000636674 DACT1Q9NYF0 836 aa17.21■□□□□ 0.35
CLN6-215ENST00000636674 DBNLQ9UJU6 430 aaKnown RBP17.21■□□□□ 0.35
CLN6-215ENST00000636674 U3KPZ7 1027 aaPredicted RBP17.21■□□□□ 0.35
CLN6-215ENST00000636674 ZNF609O15014 1411 aa17.2■□□□□ 0.34
CLN6-215ENST00000636674 GLI3P10071 1580 aa17.2■□□□□ 0.34
CLN6-215ENST00000636674 RESTQ13127 1097 aa17.2■□□□□ 0.34
CLN6-215ENST00000636674 TNNI3KQ59H18 835 aa17.2■□□□□ 0.34
CLN6-215ENST00000636674 FAM173BQ6P4H8 233 aa17.2■□□□□ 0.34
CLN6-215ENST00000636674 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.2■□□□□ 0.34
CLN6-215ENST00000636674 TICAM2Q86XR7 235 aa17.2■□□□□ 0.34
CLN6-215ENST00000636674 C17orf53Q8N3J3 647 aaPredicted RBP17.2■□□□□ 0.34
CLN6-215ENST00000636674 TDRD7Q8NHU6 1098 aaKnown RBP17.2■□□□□ 0.34
CLN6-215ENST00000636674 TCEANC2Q96MN5 208 aa17.2■□□□□ 0.34
CLN6-215ENST00000636674 NEK1Q96PY6 1258 aa17.2■□□□□ 0.34
CLN6-215ENST00000636674 PYCARDQ9ULZ3 195 aa17.2■□□□□ 0.34
CLN6-215ENST00000636674 FPGT-TNNI3KV9GXZ4 949 aa17.2■□□□□ 0.34
CLN6-215ENST00000636674 PKD1L3Q7Z443 1732 aa17.2■□□□□ 0.34
CLN6-215ENST00000636674 CAVIN2O95810 425 aa17.2■□□□□ 0.34
CLN6-215ENST00000636674 XAGE3Q8WTP9 111 aa17.2■□□□□ 0.34
CLN6-215ENST00000636674 AXIN2Q9Y2T1 843 aa17.2■□□□□ 0.34
CLN6-215ENST00000636674 GOLGA6L4A6NEF3 574 aa17.19■□□□□ 0.34
CLN6-215ENST00000636674 PLCB2Q00722 1185 aa17.19■□□□□ 0.34
CLN6-215ENST00000636674 PTPN12Q05209 780 aaKnown RBP17.19■□□□□ 0.34
CLN6-215ENST00000636674 KLHDC4Q8TBB5 520 aa17.19■□□□□ 0.34
CLN6-215ENST00000636674 ZSCAN16Q9H4T2 348 aaPredicted RBP17.19■□□□□ 0.34
CLN6-215ENST00000636674 CBX8Q9HC52 389 aa17.19■□□□□ 0.34
CLN6-215ENST00000636674 PARP4Q9UKK3 1724 aaKnown RBP17.19■□□□□ 0.34
CLN6-215ENST00000636674 MYD88Q99836 296 aa17.18■□□□□ 0.34
CLN6-215ENST00000636674 LLPHQ9BRT6 129 aaKnown RBP17.18■□□□□ 0.34
CLN6-215ENST00000636674 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLN6-215ENST00000636674 KIF3AQ9Y496 699 aa17.18■□□□□ 0.34
CLN6-215ENST00000636674 SH3TC1Q8TE82 1336 aa17.18■□□□□ 0.34
CLN6-215ENST00000636674 PALLDQ8WX93 1383 aa17.18■□□□□ 0.34
CLN6-215ENST00000636674 ANO6Q4KMQ2 910 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms