RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 DALRD3Q5D0E6 543 aaKnown RBP16.81■□□□□ 0.28
NEDD4L-238ENST00000635997 USPL1Q5W0Q7 1092 aa16.81■□□□□ 0.28
NEDD4L-238ENST00000635997 TBC1D2Q9BYX2 928 aa16.81■□□□□ 0.28
NEDD4L-238ENST00000635997 TRIM35Q9UPQ4 493 aa16.81■□□□□ 0.28
NEDD4L-238ENST00000635997 LRRIQ1Q96JM4 1722 aa16.81■□□□□ 0.28
NEDD4L-238ENST00000635997 IRS4O14654 1257 aaPredicted RBP16.81■□□□□ 0.28
NEDD4L-238ENST00000635997 LDHCP07864 332 aa16.81■□□□□ 0.28
NEDD4L-238ENST00000635997 PDE1AP54750 535 aa16.81■□□□□ 0.28
NEDD4L-238ENST00000635997 OLFM4Q6UX06 510 aa16.81■□□□□ 0.28
NEDD4L-238ENST00000635997 MAP3K5Q99683 1374 aa16.81■□□□□ 0.28
NEDD4L-238ENST00000635997 ERBB3P21860 1342 aa16.8■□□□□ 0.28
NEDD4L-238ENST00000635997 ATP2B3Q16720 1220 aa16.8■□□□□ 0.28
NEDD4L-238ENST00000635997 BMP2KLQ5H9B9 411 aa16.8■□□□□ 0.28
NEDD4L-238ENST00000635997 TTLL5Q6EMB2 1281 aa16.8■□□□□ 0.28
NEDD4L-238ENST00000635997 SH3TC1Q8TE82 1336 aa16.8■□□□□ 0.28
NEDD4L-238ENST00000635997 GRIN3BO60391 1043 aa16.8■□□□□ 0.28
NEDD4L-238ENST00000635997 KRT18P05783 430 aaKnown RBP16.8■□□□□ 0.28
NEDD4L-238ENST00000635997 PHKG2P15735 406 aa16.8■□□□□ 0.28
NEDD4L-238ENST00000635997 MRE11P49959 708 aa16.8■□□□□ 0.28
NEDD4L-238ENST00000635997 SPATA32Q96LK8 384 aa16.8■□□□□ 0.28
NEDD4L-238ENST00000635997 EVI5LQ96CN4 794 aa16.8■□□□□ 0.28
NEDD4L-238ENST00000635997 HCLS1P14317 486 aaPredicted RBP16.79■□□□□ 0.28
NEDD4L-238ENST00000635997 SPC24Q8NBT2 197 aa16.79■□□□□ 0.28
NEDD4L-238ENST00000635997 RNF123Q5XPI4 1314 aa16.79■□□□□ 0.28
NEDD4L-238ENST00000635997 IFIT3O14879 490 aaKnown RBP16.79■□□□□ 0.28
NEDD4L-238ENST00000635997 MCM4P33991 863 aa16.79■□□□□ 0.28
NEDD4L-238ENST00000635997 ATP8B2P98198 1209 aa16.79■□□□□ 0.28
NEDD4L-238ENST00000635997 ZNF496Q96IT1 587 aaPredicted RBP16.79■□□□□ 0.28
NEDD4L-238ENST00000635997 C1orf167Q5SNV9 1468 aa16.79■□□□□ 0.28
NEDD4L-238ENST00000635997 EZH2Q15910 746 aaKnown RBP16.79■□□□□ 0.28
NEDD4L-238ENST00000635997 TTC22Q5TAA0 569 aa16.79■□□□□ 0.28
NEDD4L-238ENST00000635997 KCNQ3O43525 872 aa16.78■□□□□ 0.28
NEDD4L-238ENST00000635997 TRMT1LQ7Z2T5 733 aaKnown RBP16.78■□□□□ 0.28
NEDD4L-238ENST00000635997 ZSCAN31Q96LW9 406 aaPredicted RBP16.78■□□□□ 0.28
NEDD4L-238ENST00000635997 TFIP11Q9UBB9 837 aaKnown RBP16.78■□□□□ 0.28
NEDD4L-238ENST00000635997 CHMP4BP1P59074 171 aa16.78■□□□□ 0.28
NEDD4L-238ENST00000635997 NUCB1Q02818 461 aa16.78■□□□□ 0.28
NEDD4L-238ENST00000635997 TNS3Q68CZ2 1445 aa16.78■□□□□ 0.28
NEDD4L-238ENST00000635997 ESPNB1AK53 854 aa16.78■□□□□ 0.28
NEDD4L-238ENST00000635997 UFL1O94874 794 aa16.78■□□□□ 0.28
NEDD4L-238ENST00000635997 SMC2O95347 1197 aa16.78■□□□□ 0.28
NEDD4L-238ENST00000635997 MICU3Q86XE3 530 aa16.78■□□□□ 0.28
NEDD4L-238ENST00000635997 TXLNAP40222 546 aa16.77■□□□□ 0.28
NEDD4L-238ENST00000635997 TIMM10P62072 90 aa16.77■□□□□ 0.28
NEDD4L-238ENST00000635997 ZNF444Q8N0Y2 327 aaPredicted RBP16.77■□□□□ 0.28
NEDD4L-238ENST00000635997 DDX21Q9NR30 783 aaKnown RBP eCLIP16.77■□□□□ 0.28
NEDD4L-238ENST00000635997 MADDQ8WXG6 1647 aa16.77■□□□□ 0.28
NEDD4L-238ENST00000635997 PRKG1Q13976 671 aa16.77■□□□□ 0.28
NEDD4L-238ENST00000635997 DHX8Q14562 1220 aaKnown RBP16.77■□□□□ 0.28
NEDD4L-238ENST00000635997 JMYQ8N9B5 988 aa16.77■□□□□ 0.28
NEDD4L-238ENST00000635997 GPBP1L1Q9HC44 474 aaPredicted RBP16.77■□□□□ 0.28
NEDD4L-238ENST00000635997 VAT1LQ9HCJ6 419 aa16.77■□□□□ 0.28
NEDD4L-238ENST00000635997 ZNF804AQ7Z570 1209 aa16.77■□□□□ 0.27
NEDD4L-238ENST00000635997 TNMDQ9H2S6 317 aa16.77■□□□□ 0.27
NEDD4L-238ENST00000635997 OFD1O75665 1012 aa16.76■□□□□ 0.27
NEDD4L-238ENST00000635997 ALDH1L1O75891 902 aa16.76■□□□□ 0.27
NEDD4L-238ENST00000635997 NAP1L1P55209 391 aaKnown RBP16.76■□□□□ 0.27
NEDD4L-238ENST00000635997 HDAC1Q13547 482 aaPredicted RBP16.76■□□□□ 0.27
NEDD4L-238ENST00000635997 CEP85Q6P2H3 762 aa16.76■□□□□ 0.27
NEDD4L-238ENST00000635997 ABT1Q9ULW3 272 aaKnown RBP16.76■□□□□ 0.27
NEDD4L-238ENST00000635997 CAMK4Q16566 473 aa16.76■□□□□ 0.27
NEDD4L-238ENST00000635997 PIM2Q9P1W9 311 aa16.76■□□□□ 0.27
NEDD4L-238ENST00000635997 KCNQ2O43526 872 aa16.76■□□□□ 0.27
NEDD4L-238ENST00000635997 CNKSR2Q8WXI2 1034 aa16.76■□□□□ 0.27
NEDD4L-238ENST00000635997 ZBTB40Q9NUA8 1239 aa16.76■□□□□ 0.27
NEDD4L-238ENST00000635997 SSFA2P28290 1259 aa16.76■□□□□ 0.27
NEDD4L-238ENST00000635997 CRKLP46109 303 aaKnown RBP16.76■□□□□ 0.27
NEDD4L-238ENST00000635997 OTUD7AQ8TE49 926 aaPredicted RBP16.76■□□□□ 0.27
NEDD4L-238ENST00000635997 FAM135BQ49AJ0 1406 aa16.75■□□□□ 0.27
NEDD4L-238ENST00000635997 SERPINB2P05120 415 aa16.75■□□□□ 0.27
NEDD4L-238ENST00000635997 IQCA1Q86XH1 822 aa16.75■□□□□ 0.27
NEDD4L-238ENST00000635997 NECAB1Q8N987 351 aa16.75■□□□□ 0.27
NEDD4L-238ENST00000635997 DIP2CQ9Y2E4 1556 aa16.75■□□□□ 0.27
NEDD4L-238ENST00000635997 GOLGA8BA8MQT2 603 aa16.75■□□□□ 0.27
NEDD4L-238ENST00000635997 CDKL5O76039 1030 aa16.75■□□□□ 0.27
NEDD4L-238ENST00000635997 TCIRG1Q13488 830 aa16.75■□□□□ 0.27
NEDD4L-238ENST00000635997 STX8Q9UNK0 236 aa16.75■□□□□ 0.27
NEDD4L-238ENST00000635997 SLC9C2Q5TAH2 1124 aa16.74■□□□□ 0.27
NEDD4L-238ENST00000635997 NAT10Q9H0A0 1025 aaKnown RBP16.74■□□□□ 0.27
NEDD4L-238ENST00000635997 BICC1Q9H694 974 aaKnown RBP16.74■□□□□ 0.27
NEDD4L-238ENST00000635997 CABP5Q9NP86 173 aa16.74■□□□□ 0.27
NEDD4L-238ENST00000635997 CHL1O00533 1208 aa16.74■□□□□ 0.27
NEDD4L-238ENST00000635997 TMEM132AQ24JP5 1023 aa16.73■□□□□ 0.27
NEDD4L-238ENST00000635997 SLC27A3Q5K4L6 730 aa16.73■□□□□ 0.27
NEDD4L-238ENST00000635997 CTCFLQ8NI51 663 aaPredicted RBP16.73■□□□□ 0.27
NEDD4L-238ENST00000635997 BRF1Q92994 677 aa16.73■□□□□ 0.27
NEDD4L-238ENST00000635997 GGA1Q9UJY5 639 aa16.73■□□□□ 0.27
NEDD4L-238ENST00000635997 LIMCH1Q9UPQ0 1083 aa16.73■□□□□ 0.27
NEDD4L-238ENST00000635997 EPS15P42566 896 aa16.73■□□□□ 0.27
NEDD4L-238ENST00000635997 TNNI2P48788 182 aa16.73■□□□□ 0.27
NEDD4L-238ENST00000635997 CCDC96Q2M329 555 aa16.73■□□□□ 0.27
NEDD4L-238ENST00000635997 SLC12A7Q9Y666 1083 aa16.73■□□□□ 0.27
NEDD4L-238ENST00000635997 BAG3O95817 575 aa16.73■□□□□ 0.27
NEDD4L-238ENST00000635997 NBPF7P0C2Y1 421 aaPredicted RBP16.73■□□□□ 0.27
NEDD4L-238ENST00000635997 SPTY2D1Q68D10 685 aaPredicted RBP16.73■□□□□ 0.27
NEDD4L-238ENST00000635997 ZNF594Q96JF6 807 aaPredicted RBP16.73■□□□□ 0.27
NEDD4L-238ENST00000635997 TSPY26PQ9H489 355 aa16.73■□□□□ 0.27
NEDD4L-238ENST00000635997 CYP7A1P22680 504 aa16.73■□□□□ 0.27
NEDD4L-238ENST00000635997 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.73■□□□□ 0.27
NEDD4L-238ENST00000635997 C8orf76Q96K31 380 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms