RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 FKBP4Q02790 459 aaKnown RBP eCLIP21.6■■□□□ 1.05
LIN28B-202ENST00000635857 GCKRQ14397 625 aa21.6■■□□□ 1.05
LIN28B-202ENST00000635857 ZNF526Q8TF50 670 aaPredicted RBP21.6■■□□□ 1.05
LIN28B-202ENST00000635857 C7orf43Q8WVR3 580 aa21.6■■□□□ 1.05
LIN28B-202ENST00000635857 BCL2L13Q9BXK5 485 aa21.6■■□□□ 1.05
LIN28B-202ENST00000635857 MYH3P11055 1940 aa21.6■■□□□ 1.05
LIN28B-202ENST00000635857 ZBED9Q6R2W3 1325 aa21.59■■□□□ 1.05
LIN28B-202ENST00000635857 UBE3BQ7Z3V4 1068 aa21.59■■□□□ 1.05
LIN28B-202ENST00000635857 JARID2Q92833 1246 aaPredicted RBP21.58■■□□□ 1.05
LIN28B-202ENST00000635857 SRCIN1Q9C0H9 1055 aa21.58■■□□□ 1.05
LIN28B-202ENST00000635857 DICER1Q9UPY3 1922 aaKnown RBP21.58■■□□□ 1.04
LIN28B-202ENST00000635857 OLFM4Q6UX06 510 aa21.57■■□□□ 1.04
LIN28B-202ENST00000635857 ATP6V0A2Q9Y487 856 aa21.57■■□□□ 1.04
LIN28B-202ENST00000635857 KDM2BQ8NHM5 1336 aa21.56■■□□□ 1.04
LIN28B-202ENST00000635857 ALDH1L1O75891 902 aa21.56■■□□□ 1.04
LIN28B-202ENST00000635857 BEND3Q5T5X7 828 aa21.56■■□□□ 1.04
LIN28B-202ENST00000635857 PSMD1Q99460 953 aa21.56■■□□□ 1.04
LIN28B-202ENST00000635857 C9orf78Q9NZ63 289 aaPredicted RBP21.56■■□□□ 1.04
LIN28B-202ENST00000635857 H7C1W4 665 aa21.55■■□□□ 1.04
LIN28B-202ENST00000635857 CTSWP56202 376 aa21.55■■□□□ 1.04
LIN28B-202ENST00000635857 SP8Q8IXZ3 490 aa21.55■■□□□ 1.04
LIN28B-202ENST00000635857 SUPT20HQ8NEM7 779 aa21.55■■□□□ 1.04
LIN28B-202ENST00000635857 TAF1P21675 1872 aa21.54■■□□□ 1.04
LIN28B-202ENST00000635857 DPP8Q6V1X1 898 aaPredicted RBP21.54■■□□□ 1.04
LIN28B-202ENST00000635857 CCDC85AQ96PX6 553 aaPredicted RBP21.54■■□□□ 1.04
LIN28B-202ENST00000635857 CDC5LQ99459 802 aaKnown RBP21.54■■□□□ 1.04
LIN28B-202ENST00000635857 ZNF277Q9NRM2 450 aaPredicted RBP21.54■■□□□ 1.04
LIN28B-202ENST00000635857 KIF16BQ96L93 1317 aa21.54■■□□□ 1.04
LIN28B-202ENST00000635857 DPY19L2Q6NUT2 758 aa21.53■■□□□ 1.04
LIN28B-202ENST00000635857 IARSP41252 1262 aaKnown RBP21.52■■□□□ 1.04
LIN28B-202ENST00000635857 RPS8P62241 208 aaKnown RBP21.52■■□□□ 1.04
LIN28B-202ENST00000635857 ANKRD18AQ8IVF6 992 aa21.52■■□□□ 1.04
LIN28B-202ENST00000635857 MPNDQ8N594 471 aa21.52■■□□□ 1.04
LIN28B-202ENST00000635857 JDP2Q8WYK2 163 aa21.52■■□□□ 1.04
LIN28B-202ENST00000635857 CELF1Q92879 486 aaKnown RBP21.52■■□□□ 1.04
LIN28B-202ENST00000635857 GRM8O00222 908 aa21.51■■□□□ 1.03
LIN28B-202ENST00000635857 PRELPP51888 382 aa21.51■■□□□ 1.03
LIN28B-202ENST00000635857 RARSP54136 660 aaKnown RBP21.51■■□□□ 1.03
LIN28B-202ENST00000635857 PLA2G12BQ9BX93 195 aa21.51■■□□□ 1.03
LIN28B-202ENST00000635857 API5Q9BZZ5 524 aaKnown RBP21.51■■□□□ 1.03
LIN28B-202ENST00000635857 LRRC37AA6NMS7 1700 aa21.51■■□□□ 1.03
LIN28B-202ENST00000635857 TTLL11Q8NHH1 800 aa21.5■■□□□ 1.03
LIN28B-202ENST00000635857 SEC31BQ9NQW1 1179 aa21.5■■□□□ 1.03
LIN28B-202ENST00000635857 SNED1Q8TER0 1413 aa21.49■■□□□ 1.03
LIN28B-202ENST00000635857 LARGE2Q8N3Y3 721 aa21.49■■□□□ 1.03
LIN28B-202ENST00000635857 NOB1Q9ULX3 412 aaKnown RBP21.49■■□□□ 1.03
LIN28B-202ENST00000635857 CHMP3Q9Y3E7 222 aa21.49■■□□□ 1.03
LIN28B-202ENST00000635857 RTL9Q8NET4 1388 aa21.48■■□□□ 1.03
LIN28B-202ENST00000635857 GLTPD2A6NH11 291 aa21.48■■□□□ 1.03
LIN28B-202ENST00000635857 IPO8O15397 1037 aaKnown RBP21.48■■□□□ 1.03
LIN28B-202ENST00000635857 PPIP5K2O43314 1243 aa21.48■■□□□ 1.03
LIN28B-202ENST00000635857 IGHMBP2P38935 993 aaKnown RBP21.48■■□□□ 1.03
LIN28B-202ENST00000635857 BRPF1P55201 1214 aaPredicted RBP21.48■■□□□ 1.03
LIN28B-202ENST00000635857 VPS33BQ9H267 617 aa21.48■■□□□ 1.03
LIN28B-202ENST00000635857 GREM2Q9H772 168 aa21.48■■□□□ 1.03
LIN28B-202ENST00000635857 NSFL1CQ9UNZ2 370 aaKnown RBP21.48■■□□□ 1.03
LIN28B-202ENST00000635857 CCT4P50991 539 aaKnown RBP21.47■■□□□ 1.03
LIN28B-202ENST00000635857 CASP7P55210 303 aa21.47■■□□□ 1.03
LIN28B-202ENST00000635857 NIM1KQ8IY84 436 aa21.47■■□□□ 1.03
LIN28B-202ENST00000635857 C16orf71Q8IYS4 520 aaPredicted RBP21.47■■□□□ 1.03
LIN28B-202ENST00000635857 SPEF2Q9C093 1822 aa21.47■■□□□ 1.03
LIN28B-202ENST00000635857 ANKIB1Q9P2G1 1089 aa21.46■■□□□ 1.03
LIN28B-202ENST00000635857 ANKRD18BA2A2Z9 1011 aa21.45■■□□□ 1.02
LIN28B-202ENST00000635857 C6orf229H3BNL8 230 aa21.45■■□□□ 1.02
LIN28B-202ENST00000635857 ITGA6P23229 1130 aa21.45■■□□□ 1.02
LIN28B-202ENST00000635857 EIF6P56537 245 aaKnown RBP21.45■■□□□ 1.02
LIN28B-202ENST00000635857 FAM161AQ3B820 660 aa21.45■■□□□ 1.02
LIN28B-202ENST00000635857 FRAT1Q92837 279 aaPredicted RBP21.45■■□□□ 1.02
LIN28B-202ENST00000635857 EYA3Q99504 573 aa21.45■■□□□ 1.02
LIN28B-202ENST00000635857 MPHOSPH8Q99549 860 aa21.45■■□□□ 1.02
LIN28B-202ENST00000635857 RTFDC1Q9BY42 306 aaPredicted RBP21.45■■□□□ 1.02
LIN28B-202ENST00000635857 IFIT5Q13325 482 aaKnown RBP21.44■■□□□ 1.02
LIN28B-202ENST00000635857 AOC3Q16853 763 aa21.44■■□□□ 1.02
LIN28B-202ENST00000635857 TAF7LQ5H9L4 462 aa21.44■■□□□ 1.02
LIN28B-202ENST00000635857 SLC51AQ86UW1 340 aa21.44■■□□□ 1.02
LIN28B-202ENST00000635857 ARHGAP45Q92619 1136 aa21.44■■□□□ 1.02
LIN28B-202ENST00000635857 NMRK2Q9NPI5 230 aa21.44■■□□□ 1.02
LIN28B-202ENST00000635857 CSF1RP07333 972 aa21.43■■□□□ 1.02
LIN28B-202ENST00000635857 CCDC57Q2TAC2 916 aa21.43■■□□□ 1.02
LIN28B-202ENST00000635857 COL4A1P02462 1669 aa21.42■■□□□ 1.02
LIN28B-202ENST00000635857 GPSM2P81274 684 aa21.42■■□□□ 1.02
LIN28B-202ENST00000635857 WASHC4Q2M389 1173 aa21.42■■□□□ 1.02
LIN28B-202ENST00000635857 LMBR1LQ6UX01 489 aa21.42■■□□□ 1.02
LIN28B-202ENST00000635857 RRAGCQ9HB90 399 aa21.42■■□□□ 1.02
LIN28B-202ENST00000635857 BSDC1Q9NW68 430 aaPredicted RBP21.42■■□□□ 1.02
LIN28B-202ENST00000635857 GGA1Q9UJY5 639 aa21.42■■□□□ 1.02
LIN28B-202ENST00000635857 HDAC5Q9UQL6 1122 aa21.42■■□□□ 1.02
LIN28B-202ENST00000635857 XDHP47989 1333 aa21.41■■□□□ 1.02
LIN28B-202ENST00000635857 G3V3G9 751 aa21.41■■□□□ 1.02
LIN28B-202ENST00000635857 UFL1O94874 794 aa21.41■■□□□ 1.02
LIN28B-202ENST00000635857 NBPF7P0C2Y1 421 aaPredicted RBP21.41■■□□□ 1.02
LIN28B-202ENST00000635857 FOXO4P98177 505 aa21.41■■□□□ 1.02
LIN28B-202ENST00000635857 KIAA2012Q0VF49 1180 aa21.41■■□□□ 1.02
LIN28B-202ENST00000635857 DCAF8Q5TAQ9 597 aa21.41■■□□□ 1.02
LIN28B-202ENST00000635857 UTYO14607 1347 aa21.4■■□□□ 1.02
LIN28B-202ENST00000635857 FZD9O00144 591 aa21.4■■□□□ 1.02
LIN28B-202ENST00000635857 BCAR3O75815 825 aa21.4■■□□□ 1.02
LIN28B-202ENST00000635857 VEGFAP15692 232 aaPredicted RBP21.4■■□□□ 1.02
LIN28B-202ENST00000635857 SUCLG2Q96I99 432 aa21.4■■□□□ 1.02
LIN28B-202ENST00000635857 PODXL2Q9NZ53 605 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms