RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 RASA1P20936 1047 aa4.83□□□□□ -1.64
PSPC1-208ENST00000635562 SEC13P55735 322 aa4.83□□□□□ -1.64
PSPC1-208ENST00000635562 CCINQ13939 588 aa4.83□□□□□ -1.64
PSPC1-208ENST00000635562 LRP8Q14114 963 aa4.83□□□□□ -1.64
PSPC1-208ENST00000635562 C8orf86Q6ZUL3 223 aa4.83□□□□□ -1.64
PSPC1-208ENST00000635562 ANKMY2Q8IV38 441 aa4.83□□□□□ -1.64
PSPC1-208ENST00000635562 DCAF11Q8TEB1 546 aa4.83□□□□□ -1.64
PSPC1-208ENST00000635562 C2orf49Q9BVC5 232 aaPredicted RBP4.83□□□□□ -1.64
PSPC1-208ENST00000635562 FRRS1LQ9P0K9 344 aa4.83□□□□□ -1.64
PSPC1-208ENST00000635562 SLAIN2Q9P270 581 aa4.83□□□□□ -1.64
PSPC1-208ENST00000635562 ATAD2Q6PL18 1390 aa4.82□□□□□ -1.64
PSPC1-208ENST00000635562 RGS9O75916 674 aaPredicted RBP4.82□□□□□ -1.64
PSPC1-208ENST00000635562 BRD1O95696 1058 aa4.82□□□□□ -1.64
PSPC1-208ENST00000635562 TBC1D8BQ0IIM8 1120 aa4.82□□□□□ -1.64
PSPC1-208ENST00000635562 LARP1Q6PKG0 1096 aaKnown RBP4.82□□□□□ -1.64
PSPC1-208ENST00000635562 FMR1NBQ8N0W7 255 aaPredicted RBP4.82□□□□□ -1.64
PSPC1-208ENST00000635562 TSEN2Q8NCE0 465 aaKnown RBP4.82□□□□□ -1.64
PSPC1-208ENST00000635562 ZNF280CQ8ND82 737 aa4.82□□□□□ -1.64
PSPC1-208ENST00000635562 ZNF594Q96JF6 807 aaPredicted RBP4.82□□□□□ -1.64
PSPC1-208ENST00000635562 USP21Q9UK80 565 aa4.82□□□□□ -1.64
PSPC1-208ENST00000635562 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.82□□□□□ -1.64
PSPC1-208ENST00000635562 C21orf2O43822 256 aa4.81□□□□□ -1.64
PSPC1-208ENST00000635562 MAP3K6O95382 1288 aa4.81□□□□□ -1.64
PSPC1-208ENST00000635562 SELPP16109 830 aa4.81□□□□□ -1.64
PSPC1-208ENST00000635562 AFF1P51825 1210 aaKnown RBP4.81□□□□□ -1.64
PSPC1-208ENST00000635562 DPYDQ12882 1025 aa4.81□□□□□ -1.64
PSPC1-208ENST00000635562 PHLDB3Q6NSJ2 640 aa4.81□□□□□ -1.64
PSPC1-208ENST00000635562 PSAPL1Q6NUJ1 521 aa4.81□□□□□ -1.64
PSPC1-208ENST00000635562 FAM200AQ8TCP9 573 aa4.81□□□□□ -1.64
PSPC1-208ENST00000635562 CLP1Q92989 425 aaKnown RBP4.81□□□□□ -1.64
PSPC1-208ENST00000635562 GSX2Q9BZM3 304 aa4.81□□□□□ -1.64
PSPC1-208ENST00000635562 DNAJB12Q9NXW2 375 aaKnown RBP4.81□□□□□ -1.64
PSPC1-208ENST00000635562 NFKB1P19838 968 aa4.8□□□□□ -1.64
PSPC1-208ENST00000635562 IGFBP4P22692 258 aa4.8□□□□□ -1.64
PSPC1-208ENST00000635562 SWI5Q1ZZU3 235 aa4.8□□□□□ -1.64
PSPC1-208ENST00000635562 FOXD4L6Q3SYB3 417 aaPredicted RBP4.8□□□□□ -1.64
PSPC1-208ENST00000635562 MSL1Q68DK7 614 aa4.8□□□□□ -1.64
PSPC1-208ENST00000635562 FOXD4L3Q6VB84 417 aaPredicted RBP4.8□□□□□ -1.64
PSPC1-208ENST00000635562 SLC51AQ86UW1 340 aa4.8□□□□□ -1.64
PSPC1-208ENST00000635562 SCG3Q8WXD2 468 aaKnown RBP4.8□□□□□ -1.64
PSPC1-208ENST00000635562 TTC9Q92623 222 aa4.8□□□□□ -1.64
PSPC1-208ENST00000635562 TP53INP1Q96A56 240 aa4.8□□□□□ -1.64
PSPC1-208ENST00000635562 IGFLR1Q9H665 355 aa4.8□□□□□ -1.64
PSPC1-208ENST00000635562 SSFA2P28290 1259 aa4.79□□□□□ -1.64
PSPC1-208ENST00000635562 KCNA1Q09470 495 aa4.79□□□□□ -1.64
PSPC1-208ENST00000635562 FAM35AQ86V20 835 aa4.79□□□□□ -1.64
PSPC1-208ENST00000635562 NUDT8Q8WV74 236 aa4.79□□□□□ -1.64
PSPC1-208ENST00000635562 NGLY1Q96IV0 654 aa4.79□□□□□ -1.64
PSPC1-208ENST00000635562 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.79□□□□□ -1.641e-6■■■■■ 78.4
PSPC1-208ENST00000635562 FOXO3O43524 673 aa4.78□□□□□ -1.64
PSPC1-208ENST00000635562 ARSDP51689 593 aa4.78□□□□□ -1.64
PSPC1-208ENST00000635562 OCLNQ16625 522 aa4.78□□□□□ -1.64
PSPC1-208ENST00000635562 IGF2-ASQ6U949 168 aa4.78□□□□□ -1.64
PSPC1-208ENST00000635562 ILDR2Q71H61 639 aa4.78□□□□□ -1.64
PSPC1-208ENST00000635562 FBXO11Q86XK2 927 aa4.78□□□□□ -1.64
PSPC1-208ENST00000635562 WFDC8Q8IUA0 241 aa4.78□□□□□ -1.64
PSPC1-208ENST00000635562 DMRTC2Q8IXT2 367 aaPredicted RBP4.78□□□□□ -1.64
PSPC1-208ENST00000635562 TRPM4Q8TD43 1214 aa4.78□□□□□ -1.64
PSPC1-208ENST00000635562 CHMP7Q8WUX9 453 aaPredicted RBP4.78□□□□□ -1.64
PSPC1-208ENST00000635562 HINFPQ9BQA5 517 aa4.78□□□□□ -1.64
PSPC1-208ENST00000635562 SSBP4Q9BWG4 385 aaPredicted RBP4.78□□□□□ -1.64
PSPC1-208ENST00000635562 SRA1Q9HD15 236 aaKnown RBP4.78□□□□□ -1.64
PSPC1-208ENST00000635562 NAGPAQ9UK23 515 aa4.78□□□□□ -1.64
PSPC1-208ENST00000635562 GNEQ9Y223 722 aaKnown RBP4.78□□□□□ -1.64
PSPC1-208ENST00000635562 INPP5BP32019 993 aa4.77□□□□□ -1.65
PSPC1-208ENST00000635562 GPLD1P80108 840 aa4.77□□□□□ -1.65
PSPC1-208ENST00000635562 ELMSAN1Q6PJG2 1045 aa4.77□□□□□ -1.65
PSPC1-208ENST00000635562 DHX32Q7L7V1 743 aaKnown RBP4.77□□□□□ -1.65
PSPC1-208ENST00000635562 TXNDC2Q86VQ3 553 aa4.77□□□□□ -1.65
PSPC1-208ENST00000635562 AEBP1Q8IUX7 1158 aa4.77□□□□□ -1.65
PSPC1-208ENST00000635562 MAP4K3Q8IVH8 894 aa4.77□□□□□ -1.65
PSPC1-208ENST00000635562 KRTAP9-2Q9BYQ4 174 aa4.77□□□□□ -1.65
PSPC1-208ENST00000635562 DMGDHQ9UI17 866 aaKnown RBP4.77□□□□□ -1.65
PSPC1-208ENST00000635562 RNF112Q9ULX5 631 aa4.77□□□□□ -1.65
PSPC1-208ENST00000635562 ZBTB7CA1YPR0 619 aa4.76□□□□□ -1.65
PSPC1-208ENST00000635562 PATL2C9JE40 543 aaKnown RBP4.76□□□□□ -1.65
PSPC1-208ENST00000635562 IDH3AP50213 366 aa4.76□□□□□ -1.65
PSPC1-208ENST00000635562 NRLP54845 237 aa4.76□□□□□ -1.65
PSPC1-208ENST00000635562 SHISA2Q6UWI4 295 aa4.76□□□□□ -1.65
PSPC1-208ENST00000635562 CACTIN-AS1Q8N1I8 211 aa4.76□□□□□ -1.65
PSPC1-208ENST00000635562 VTI1AQ96AJ9 217 aa4.76□□□□□ -1.65
PSPC1-208ENST00000635562 LPIN3Q9BQK8 851 aa4.76□□□□□ -1.65
PSPC1-208ENST00000635562 CXXC1Q9P0U4 656 aaPredicted RBP4.76□□□□□ -1.65
PSPC1-208ENST00000635562 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.75□□□□□ -1.65
PSPC1-208ENST00000635562 HYAL3O43820 417 aaPredicted RBP4.75□□□□□ -1.65
PSPC1-208ENST00000635562 RARAP10276 462 aa4.75□□□□□ -1.65
PSPC1-208ENST00000635562 CPB1P15086 417 aa4.75□□□□□ -1.65
PSPC1-208ENST00000635562 ATP2B4P23634 1241 aa4.75□□□□□ -1.65
PSPC1-208ENST00000635562 WEE1P30291 646 aa4.75□□□□□ -1.65
PSPC1-208ENST00000635562 B4GALNT3Q6L9W6 998 aa4.75□□□□□ -1.65
PSPC1-208ENST00000635562 WFDC12Q8WWY7 111 aa4.75□□□□□ -1.65
PSPC1-208ENST00000635562 MYO19Q96H55 970 aa4.75□□□□□ -1.65
PSPC1-208ENST00000635562 RBSNQ9H1K0 784 aa4.75□□□□□ -1.65
PSPC1-208ENST00000635562 BCS1LQ9Y276 419 aa4.75□□□□□ -1.65
PSPC1-208ENST00000635562 GSC2O15499 205 aa4.74□□□□□ -1.65
PSPC1-208ENST00000635562 EGFRP00533 1210 aa4.74□□□□□ -1.65
PSPC1-208ENST00000635562 GRIK5Q16478 980 aa4.74□□□□□ -1.65
PSPC1-208ENST00000635562 C11orf91Q3C1V1 193 aa4.74□□□□□ -1.65
PSPC1-208ENST00000635562 PERM1Q5SV97 790 aa4.74□□□□□ -1.65
PSPC1-208ENST00000635562 MRPL18Q9H0U6 180 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms