RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 PNMA5Q96PV4 448 aa6.21□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 PHACTR1Q9C0D0 580 aa6.21□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 NFKB1P19838 968 aa6.2□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 PSMA6P60900 246 aaKnown RBP6.2□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 PERM1Q5SV97 790 aa6.2□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 POTEAQ6S8J7 498 aa6.2□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 BTLAQ7Z6A9 289 aa6.2□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 STAG2Q8N3U4 1231 aa6.2□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 MRPL18Q9H0U6 180 aaKnown RBP6.2□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 FRRS1LQ9P0K9 344 aa6.2□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 MKRN1Q9UHC7 482 aaKnown RBP6.2□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 MAFBQ9Y5Q3 323 aaPredicted RBP6.2□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 FAM196BA6NMK8 535 aa6.19□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 F8W735 103 aaPredicted RBP6.19□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 PCSK7Q16549 785 aa6.19□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 HIF1AQ16665 826 aa6.19□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 CCDC102BQ68D86 513 aa6.19□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 ZDHHC13Q8IUH4 622 aa6.19□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 OGFOD1Q8N543 542 aa6.19□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 TPCN2Q8NHX9 752 aa6.19□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 STOML1Q9UBI4 398 aa6.19□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 ZBTB7BO15156 539 aaPredicted RBP6.18□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 CCINQ13939 588 aa6.18□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 INTS5Q6P9B9 1019 aaKnown RBP6.18□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 ELMSAN1Q6PJG2 1045 aa6.18□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 DEPDC4Q8N2C3 294 aa6.18□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 TTC9Q92623 222 aa6.18□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 PPP1R12CQ9BZL4 782 aa6.18□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 ADGRE2Q9UHX3 823 aa6.18□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 WNT11O96014 354 aa6.17□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 GRIK1P39086 918 aa6.17□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 CLDN10P78369 228 aa6.17□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 LCE4AQ5TA78 99 aa6.17□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 OGFOD2Q6N063 350 aa6.17□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 LARP1Q6PKG0 1096 aaKnown RBP6.17□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 Q6ZS46 218 aa6.17□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 DTX1Q86Y01 620 aa6.17□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 KRTAP4-11Q9BYQ6 195 aa6.17□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 ZBTB42B2RXF5 422 aa6.16□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 SEC13P55735 322 aa6.16□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 TSPAN10Q9H1Z9 355 aaPredicted RBP6.16□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 TFIP11Q9UBB9 837 aaKnown RBP6.16□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 GLB1P16278 677 aa6.15□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 NFIAQ12857 509 aa6.15□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 AGGF1Q8N302 714 aaeCLIP6.15□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 TRPM4Q8TD43 1214 aa6.15□□□□□ -1.42
NPHP3-ACAD11-202ENST00000632629 DKK1O94907 266 aa6.14□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 MAP3K6O95382 1288 aa6.14□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 C8AP07357 584 aa6.14□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 RASA1P20936 1047 aa6.14□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 MLLT1Q03111 559 aaPredicted RBP6.14□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 UBL7Q96S82 380 aaPredicted RBP6.14□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 SMG9Q9H0W8 520 aaKnown RBP6.14□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 KIAA1024Q9UPX6 916 aa6.14□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 PRR19A6NJB7 356 aa6.13□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 DHX15O43143 795 aaKnown RBP6.13□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 DHX32Q7L7V1 743 aaKnown RBP6.13□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 ALDH16A1Q8IZ83 802 aa6.13□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 VRTNQ9H8Y1 702 aa6.13□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 ZFATQ9P243 1243 aa6.13□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 USP17L15C9J2P7 530 aa6.12□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 USP17L10C9JJH3 530 aa6.12□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 USP17L13C9JLJ4 530 aa6.12□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 USP17L12C9JPN9 530 aa6.12□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 USP17L11C9JVI0 530 aa6.12□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 USP17L21D6R901 530 aa6.12□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 USP17L18D6R9N7 530 aa6.12□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 USP17L22D6RA61 530 aa6.12□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 USP17L17D6RBQ6 530 aa6.12□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 USP17L19D6RCP7 530 aa6.12□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 USP17L20D6RJB6 530 aa6.12□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 IGFBP4P22692 258 aa6.12□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 USP17L24Q0WX57 530 aa6.12□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 PTK7Q13308 1070 aa6.12□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 KANK4Q5T7N3 995 aaPredicted RBP6.12□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 ANKMY2Q8IV38 441 aa6.12□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 ZNF594Q96JF6 807 aaPredicted RBP6.12□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 GPLD1P80108 840 aa6.11□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 IER5Q5VY09 327 aa6.11□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 HFE2Q6ZVN8 426 aa6.11□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 ARMC10Q8N2F6 343 aa6.11□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 POU5F2Q8N7G0 328 aa6.11□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 ATAD2Q6PL18 1390 aa6.1□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 FOXO3O43524 673 aa6.1□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 PPP1R12BO60237 982 aaPredicted RBP6.1□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 TARSP26639 723 aaKnown RBP6.1□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 GRNP28799 593 aaKnown RBP6.1□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 LMOD1P29536 600 aaPredicted RBP6.1□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 ELOAQ14241 798 aaKnown RBP6.1□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 SETDB1Q15047 1291 aa6.1□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 RNF43Q68DV7 783 aa6.1□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 KRT25Q7Z3Z0 450 aa6.1□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 TRIM42Q8IWZ5 723 aa6.1□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 ABI1Q8IZP0 508 aa6.1□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 C2orf49Q9BVC5 232 aaPredicted RBP6.1□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 C7orf69Q9H7B7 122 aa6.1□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 SRA1Q9HD15 236 aaKnown RBP6.1□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.1□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 DMGDHQ9UI17 866 aaKnown RBP6.1□□□□□ -1.43
NPHP3-ACAD11-202ENST00000632629 EIF2AK2P19525 551 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms