RNA–Protein interactions for RNA: ENST00000630295.1

BRCC3-210, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-210ENST00000630295 PRR5LQ6MZQ0 368 aa11.15□□□□□ -0.62
BRCC3-210ENST00000630295 SYNE4Q8N205 404 aa11.15□□□□□ -0.62
BRCC3-210ENST00000630295 RPGRQ92834 1020 aaKnown RBP11.15□□□□□ -0.62
BRCC3-210ENST00000630295 PDE8AO60658 829 aa11.14□□□□□ -0.63
BRCC3-210ENST00000630295 PDE6BP35913 854 aa11.14□□□□□ -0.63
BRCC3-210ENST00000630295 AAMPQ13685 434 aa11.14□□□□□ -0.63
BRCC3-210ENST00000630295 CCDC152Q4G0S7 254 aa11.14□□□□□ -0.63
BRCC3-210ENST00000630295 IFNLR1Q8IU57 520 aaPredicted RBP11.14□□□□□ -0.63
BRCC3-210ENST00000630295 SUCLG2Q96I99 432 aa11.14□□□□□ -0.63
BRCC3-210ENST00000630295 HMMRO75330 724 aa11.13□□□□□ -0.63
BRCC3-210ENST00000630295 CCDC57Q2TAC2 916 aa11.13□□□□□ -0.63
BRCC3-210ENST00000630295 LMBR1LQ6UX01 489 aa11.13□□□□□ -0.63
BRCC3-210ENST00000630295 DDX46Q7L014 1031 aaKnown RBP11.13□□□□□ -0.63
BRCC3-210ENST00000630295 BRIP1Q9BX63 1249 aa11.13□□□□□ -0.63
BRCC3-210ENST00000630295 TMX4Q9H1E5 349 aaPredicted RBP11.13□□□□□ -0.63
BRCC3-210ENST00000630295 BICC1Q9H694 974 aaKnown RBP11.13□□□□□ -0.63
BRCC3-210ENST00000630295 ZBTB40Q9NUA8 1239 aa11.13□□□□□ -0.63
BRCC3-210ENST00000630295 ZBTB47Q9UFB7 747 aaPredicted RBP11.13□□□□□ -0.63
BRCC3-210ENST00000630295 CDHR2Q9BYE9 1310 aa11.12□□□□□ -0.63
BRCC3-210ENST00000630295 H0YIN7 160 aa11.12□□□□□ -0.63
BRCC3-210ENST00000630295 SRGAP3O43295 1099 aa11.12□□□□□ -0.63
BRCC3-210ENST00000630295 CTSWP56202 376 aa11.12□□□□□ -0.63
BRCC3-210ENST00000630295 IFIT5Q13325 482 aaKnown RBP11.12□□□□□ -0.63
BRCC3-210ENST00000630295 OS9Q13438 667 aaPredicted RBP11.12□□□□□ -0.63
BRCC3-210ENST00000630295 C2CD5Q86YS7 1000 aa11.12□□□□□ -0.63
BRCC3-210ENST00000630295 ZNF622Q969S3 477 aaKnown RBP eCLIP11.12□□□□□ -0.63
BRCC3-210ENST00000630295 RBM17Q96I25 401 aaKnown RBP11.12□□□□□ -0.63
BRCC3-210ENST00000630295 BCL11AQ9H165 835 aa11.12□□□□□ -0.63
BRCC3-210ENST00000630295 IBTKQ9P2D0 1353 aaPredicted RBP11.12□□□□□ -0.63
BRCC3-210ENST00000630295 UTYO14607 1347 aa11.11□□□□□ -0.63
BRCC3-210ENST00000630295 ARFGEF2Q9Y6D5 1785 aa11.11□□□□□ -0.63
BRCC3-210ENST00000630295 ANKRD18BA2A2Z9 1011 aa11.11□□□□□ -0.63
BRCC3-210ENST00000630295 SLC10A5Q5PT55 438 aa11.11□□□□□ -0.63
BRCC3-210ENST00000630295 RPAP2Q8IXW5 612 aaPredicted RBP11.11□□□□□ -0.63
BRCC3-210ENST00000630295 RWDD1Q9H446 243 aaPredicted RBP11.11□□□□□ -0.63
BRCC3-210ENST00000630295 SCN7AQ01118 1682 aa11.11□□□□□ -0.63
BRCC3-210ENST00000630295 C4AP0C0L4 1744 aa11.1□□□□□ -0.63
BRCC3-210ENST00000630295 IGHMBP2P38935 993 aaKnown RBP11.1□□□□□ -0.63
BRCC3-210ENST00000630295 CASP7P55210 303 aa11.1□□□□□ -0.63
BRCC3-210ENST00000630295 CCDC136Q96JN2 1154 aa11.1□□□□□ -0.63
BRCC3-210ENST00000630295 CDC5LQ99459 802 aaKnown RBP11.1□□□□□ -0.63
BRCC3-210ENST00000630295 MPHOSPH8Q99549 860 aa11.1□□□□□ -0.63
BRCC3-210ENST00000630295 PLA2G12BQ9BX93 195 aa11.1□□□□□ -0.63
BRCC3-210ENST00000630295 PDZRN3Q9UPQ7 1066 aa11.1□□□□□ -0.63
BRCC3-210ENST00000630295 ABCC12Q96J65 1359 aa11.09□□□□□ -0.63
BRCC3-210ENST00000630295 C19orf67A6NJJ6 358 aa11.09□□□□□ -0.63
BRCC3-210ENST00000630295 ITGA6P23229 1130 aa11.09□□□□□ -0.63
BRCC3-210ENST00000630295 FOXO4P98177 505 aa11.09□□□□□ -0.63
BRCC3-210ENST00000630295 ATP8B2P98198 1209 aa11.09□□□□□ -0.63
BRCC3-210ENST00000630295 G3BP1Q13283 466 aaKnown RBP eCLIP11.09□□□□□ -0.63
BRCC3-210ENST00000630295 FAM161AQ3B820 660 aa11.09□□□□□ -0.63
BRCC3-210ENST00000630295 EPHA10Q5JZY3 1008 aa11.09□□□□□ -0.63
BRCC3-210ENST00000630295 ERICH6BQ5W0A0 696 aa11.09□□□□□ -0.63
BRCC3-210ENST00000630295 ANKRD18AQ8IVF6 992 aa11.09□□□□□ -0.63
BRCC3-210ENST00000630295 TTLL11Q8NHH1 800 aa11.09□□□□□ -0.63
BRCC3-210ENST00000630295 GREM2Q9H772 168 aa11.09□□□□□ -0.63
BRCC3-210ENST00000630295 CNNM1Q9NRU3 951 aa11.09□□□□□ -0.63
BRCC3-210ENST00000630295 NUP98P52948 1817 aa11.09□□□□□ -0.63
BRCC3-210ENST00000630295 BCORQ6W2J9 1755 aa11.08□□□□□ -0.64
BRCC3-210ENST00000630295 TUBGCP6Q96RT7 1819 aa11.08□□□□□ -0.64
BRCC3-210ENST00000630295 APBB1O00213 710 aa11.08□□□□□ -0.64
BRCC3-210ENST00000630295 SURF6O75683 361 aaKnown RBP11.08□□□□□ -0.64
BRCC3-210ENST00000630295 NPR1P16066 1061 aa11.08□□□□□ -0.64
BRCC3-210ENST00000630295 ALDH1B1P30837 517 aa11.08□□□□□ -0.64
BRCC3-210ENST00000630295 PTGER2P43116 358 aa11.08□□□□□ -0.64
BRCC3-210ENST00000630295 SF3B3Q15393 1217 aaKnown RBP11.08□□□□□ -0.64
BRCC3-210ENST00000630295 CEP85Q6P2H3 762 aa11.08□□□□□ -0.64
BRCC3-210ENST00000630295 C3orf67Q6ZVT6 689 aa11.08□□□□□ -0.64
BRCC3-210ENST00000630295 ANKRD44Q8N8A2 993 aa11.08□□□□□ -0.64
BRCC3-210ENST00000630295 MASTLQ96GX5 879 aa11.08□□□□□ -0.64
BRCC3-210ENST00000630295 SIL1Q9H173 461 aa11.08□□□□□ -0.64
BRCC3-210ENST00000630295 CD2APQ9Y5K6 639 aa11.08□□□□□ -0.64
BRCC3-210ENST00000630295 A0A0G2JLW4 131 aa11.07□□□□□ -0.64
BRCC3-210ENST00000630295 HAX1O00165 279 aa11.07□□□□□ -0.64
BRCC3-210ENST00000630295 CSF1RP07333 972 aa11.07□□□□□ -0.64
BRCC3-210ENST00000630295 CHRNA5P30532 468 aa11.07□□□□□ -0.64
BRCC3-210ENST00000630295 TGFB2P61812 414 aa11.07□□□□□ -0.64
BRCC3-210ENST00000630295 HSP90AB4PQ58FF6 505 aa11.07□□□□□ -0.64
BRCC3-210ENST00000630295 LDHAL6AQ6ZMR3 332 aa11.07□□□□□ -0.64
BRCC3-210ENST00000630295 CNKSR1Q969H4 720 aa11.07□□□□□ -0.64
BRCC3-210ENST00000630295 KAZALD1Q96I82 304 aa11.07□□□□□ -0.64
BRCC3-210ENST00000630295 SEC31BQ9NQW1 1179 aa11.07□□□□□ -0.64
BRCC3-210ENST00000630295 PPP4R2Q9NY27 417 aa11.07□□□□□ -0.64
BRCC3-210ENST00000630295 WWC3Q9ULE0 1092 aa11.07□□□□□ -0.64
BRCC3-210ENST00000630295 PCDHB15Q9Y5E8 787 aa11.07□□□□□ -0.64
BRCC3-210ENST00000630295 AFDNP55196 1824 aaKnown RBP11.07□□□□□ -0.64
BRCC3-210ENST00000630295 QSER1Q2KHR3 1735 aa11.06□□□□□ -0.64
BRCC3-210ENST00000630295 PNMA6EA0A0J9YXQ4 647 aa11.06□□□□□ -0.64
BRCC3-210ENST00000630295 DPEP1P16444 411 aa11.06□□□□□ -0.64
BRCC3-210ENST00000630295 RPS8P62241 208 aaKnown RBP11.06□□□□□ -0.64
BRCC3-210ENST00000630295 RABL6Q3YEC7 729 aaPredicted RBP11.06□□□□□ -0.64
BRCC3-210ENST00000630295 PELP1Q8IZL8 1130 aaKnown RBP11.06□□□□□ -0.64
BRCC3-210ENST00000630295 ZNF594Q96JF6 807 aaPredicted RBP11.06□□□□□ -0.64
BRCC3-210ENST00000630295 GTF3C3Q9Y5Q9 886 aa11.06□□□□□ -0.64
BRCC3-210ENST00000630295 PPEF1O14829 653 aaPredicted RBP11.05□□□□□ -0.64
BRCC3-210ENST00000630295 BBOX1O75936 387 aa11.05□□□□□ -0.64
BRCC3-210ENST00000630295 SRGNP10124 158 aa11.05□□□□□ -0.64
BRCC3-210ENST00000630295 KCNJ4P48050 445 aa11.05□□□□□ -0.64
BRCC3-210ENST00000630295 GRAPQ13588 217 aa11.05□□□□□ -0.64
BRCC3-210ENST00000630295 STYK1Q6J9G0 422 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms