RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 CEP126Q9P2H0 1117 aa19.77■□□□□ 0.76
LDB3-208ENST00000623007 INTS5Q6P9B9 1019 aaKnown RBP19.76■□□□□ 0.75
LDB3-208ENST00000623007 ATG9AQ7Z3C6 839 aa19.76■□□□□ 0.75
LDB3-208ENST00000623007 ACSBG1Q96GR2 724 aa19.76■□□□□ 0.75
LDB3-208ENST00000623007 COL5A3P25940 1745 aaPredicted RBP19.76■□□□□ 0.75
LDB3-208ENST00000623007 ABCC12Q96J65 1359 aa19.76■□□□□ 0.75
LDB3-208ENST00000623007 JARID2Q92833 1246 aaPredicted RBP19.75■□□□□ 0.75
LDB3-208ENST00000623007 TRMT112Q9UI30 125 aaKnown RBP19.75■□□□□ 0.75
LDB3-208ENST00000623007 DBNLQ9UJU6 430 aaKnown RBP19.75■□□□□ 0.75
LDB3-208ENST00000623007 CNTNAP4Q9C0A0 1308 aa19.75■□□□□ 0.75
LDB3-208ENST00000623007 ANKRD18BA2A2Z9 1011 aa19.75■□□□□ 0.75
LDB3-208ENST00000623007 PTMSP20962 102 aa19.75■□□□□ 0.75
LDB3-208ENST00000623007 MEX3CQ5U5Q3 659 aaKnown RBP19.75■□□□□ 0.75
LDB3-208ENST00000623007 HAUS7Q99871 368 aa19.75■□□□□ 0.75
LDB3-208ENST00000623007 FSD1Q9BTV5 496 aa19.75■□□□□ 0.75
LDB3-208ENST00000623007 A0A0G2JS52 829 aa19.74■□□□□ 0.75
LDB3-208ENST00000623007 CTSWP56202 376 aa19.74■□□□□ 0.75
LDB3-208ENST00000623007 HLFQ16534 295 aa19.74■□□□□ 0.75
LDB3-208ENST00000623007 CWC27Q6UX04 472 aaKnown RBP19.74■□□□□ 0.75
LDB3-208ENST00000623007 ZNF609O15014 1411 aa19.74■□□□□ 0.75
LDB3-208ENST00000623007 NHSQ6T4R5 1651 aa19.73■□□□□ 0.75
LDB3-208ENST00000623007 SH3TC1Q8TE82 1336 aa19.73■□□□□ 0.75
LDB3-208ENST00000623007 IRS4O14654 1257 aaPredicted RBP19.73■□□□□ 0.75
LDB3-208ENST00000623007 MAP4K4O95819 1239 aaPredicted RBP19.73■□□□□ 0.75
LDB3-208ENST00000623007 DDIT3P35638 169 aa19.73■□□□□ 0.75
LDB3-208ENST00000623007 RC3H1Q5TC82 1133 aaKnown RBP19.73■□□□□ 0.75
LDB3-208ENST00000623007 FAM89AQ96GI7 184 aa19.73■□□□□ 0.75
LDB3-208ENST00000623007 LSG1Q9H089 658 aaKnown RBP19.73■□□□□ 0.75
LDB3-208ENST00000623007 BOLA2Q9H3K6 86 aa19.73■□□□□ 0.75
LDB3-208ENST00000623007 RNF20Q5VTR2 975 aa19.72■□□□□ 0.75
LDB3-208ENST00000623007 ZKSCAN1P17029 563 aaPredicted RBP19.71■□□□□ 0.75
LDB3-208ENST00000623007 CCDC158Q5M9N0 1113 aa19.71■□□□□ 0.75
LDB3-208ENST00000623007 TTLL11Q8NHH1 800 aa19.71■□□□□ 0.75
LDB3-208ENST00000623007 UTP14AQ9BVJ6 771 aaKnown RBP19.71■□□□□ 0.75
LDB3-208ENST00000623007 TRPC5Q9UL62 973 aaPredicted RBP19.71■□□□□ 0.75
LDB3-208ENST00000623007 GJD4Q96KN9 370 aaPredicted RBP19.71■□□□□ 0.75
LDB3-208ENST00000623007 TLR7Q9NYK1 1049 aaKnown RBP19.71■□□□□ 0.75
LDB3-208ENST00000623007 TBC1D2BQ9UPU7 963 aa19.71■□□□□ 0.75
LDB3-208ENST00000623007 RTL9Q8NET4 1388 aa19.7■□□□□ 0.74
LDB3-208ENST00000623007 ONECUT3O60422 494 aaPredicted RBP19.7■□□□□ 0.74
LDB3-208ENST00000623007 GPTP24298 496 aa19.7■□□□□ 0.74
LDB3-208ENST00000623007 NEK4P51957 841 aa19.7■□□□□ 0.74
LDB3-208ENST00000623007 NUCB2P80303 420 aa19.7■□□□□ 0.74
LDB3-208ENST00000623007 TM6SF1Q9BZW5 370 aa19.7■□□□□ 0.74
LDB3-208ENST00000623007 BCORQ6W2J9 1755 aa19.69■□□□□ 0.74
LDB3-208ENST00000623007 CAMTA2O94983 1202 aa19.69■□□□□ 0.74
LDB3-208ENST00000623007 ITPK1Q13572 414 aa19.69■□□□□ 0.74
LDB3-208ENST00000623007 KBTBD3Q8NAB2 608 aa19.69■□□□□ 0.74
LDB3-208ENST00000623007 KCNB2Q92953 911 aa19.69■□□□□ 0.74
LDB3-208ENST00000623007 NEUROD6Q96NK8 337 aa19.69■□□□□ 0.74
LDB3-208ENST00000623007 DBNDD2Q9BQY9 259 aa19.69■□□□□ 0.74
LDB3-208ENST00000623007 HMG20BQ9P0W2 317 aa19.69■□□□□ 0.74
LDB3-208ENST00000623007 CCDC171Q6TFL3 1326 aa19.69■□□□□ 0.74
LDB3-208ENST00000623007 A0A1B0GUL7 405 aa19.68■□□□□ 0.74
LDB3-208ENST00000623007 SOCS7O14512 581 aa19.68■□□□□ 0.74
LDB3-208ENST00000623007 ITGA6P23229 1130 aa19.68■□□□□ 0.74
LDB3-208ENST00000623007 INTS4Q96HW7 963 aaKnown RBP19.68■□□□□ 0.74
LDB3-208ENST00000623007 GBP4Q96PP9 640 aa19.68■□□□□ 0.74
LDB3-208ENST00000623007 LAMB2P55268 1798 aa19.68■□□□□ 0.74
LDB3-208ENST00000623007 PSMA5P28066 241 aa19.68■□□□□ 0.74
LDB3-208ENST00000623007 ZNF512BQ96KM6 892 aaPredicted RBP19.68■□□□□ 0.74
LDB3-208ENST00000623007 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.68■□□□□ 0.74
LDB3-208ENST00000623007 MROH5Q6ZUA9 1318 aa19.67■□□□□ 0.74
LDB3-208ENST00000623007 MED23Q9ULK4 1368 aa19.67■□□□□ 0.74
LDB3-208ENST00000623007 DDX11L8A8MPP1 907 aa19.67■□□□□ 0.74
LDB3-208ENST00000623007 ATRNO75882 1429 aa19.67■□□□□ 0.74
LDB3-208ENST00000623007 LRRC24Q50LG9 513 aa19.67■□□□□ 0.74
LDB3-208ENST00000623007 GORABQ5T7V8 394 aa19.67■□□□□ 0.74
LDB3-208ENST00000623007 LDHAL6AQ6ZMR3 332 aa19.67■□□□□ 0.74
LDB3-208ENST00000623007 MAP4K1Q92918 833 aa19.67■□□□□ 0.74
LDB3-208ENST00000623007 CD2BP2O95400 341 aaKnown RBP19.66■□□□□ 0.74
LDB3-208ENST00000623007 ZFYP08048 801 aaPredicted RBP19.66■□□□□ 0.74
LDB3-208ENST00000623007 NMIQ13287 307 aaPredicted RBP19.66■□□□□ 0.74
LDB3-208ENST00000623007 CCDC152Q4G0S7 254 aa19.66■□□□□ 0.74
LDB3-208ENST00000623007 HELLSQ9NRZ9 838 aa19.66■□□□□ 0.74
LDB3-208ENST00000623007 UBN2Q6ZU65 1347 aa19.66■□□□□ 0.74
LDB3-208ENST00000623007 LRP5O75197 1615 aa19.66■□□□□ 0.74
LDB3-208ENST00000623007 IFIT1P09914 478 aaKnown RBP19.65■□□□□ 0.74
LDB3-208ENST00000623007 KCNJ4P48050 445 aa19.65■□□□□ 0.74
LDB3-208ENST00000623007 KRT32Q14532 448 aa19.65■□□□□ 0.74
LDB3-208ENST00000623007 CNNM1Q9NRU3 951 aa19.65■□□□□ 0.74
LDB3-208ENST00000623007 PAG1Q9NWQ8 432 aa19.65■□□□□ 0.74
LDB3-208ENST00000623007 RIPOR2Q9Y4F9 1068 aa19.65■□□□□ 0.74
LDB3-208ENST00000623007 BTAF1O14981 1849 aa19.65■□□□□ 0.74
LDB3-208ENST00000623007 KCNQ2O43526 872 aa19.65■□□□□ 0.74
LDB3-208ENST00000623007 RAB3GAP1Q15042 981 aa19.65■□□□□ 0.74
LDB3-208ENST00000623007 METTL24Q5JXM2 366 aa19.65■□□□□ 0.74
LDB3-208ENST00000623007 MYH14Q7Z406 1995 aaKnown RBP19.65■□□□□ 0.74
LDB3-208ENST00000623007 NECTIN1Q15223 517 aa19.64■□□□□ 0.73
LDB3-208ENST00000623007 TSGA10IPQ3SY00 556 aa19.64■□□□□ 0.73
LDB3-208ENST00000623007 MCMDC2Q4G0Z9 681 aa19.64■□□□□ 0.73
LDB3-208ENST00000623007 TTC39AQ5SRH9 613 aa19.64■□□□□ 0.73
LDB3-208ENST00000623007 SPRYD3Q8NCJ5 442 aa19.64■□□□□ 0.73
LDB3-208ENST00000623007 ZNF594Q96JF6 807 aaPredicted RBP19.64■□□□□ 0.73
LDB3-208ENST00000623007 NIP7Q9Y221 180 aaKnown RBP eCLIP19.64■□□□□ 0.73
LDB3-208ENST00000623007 SNX14Q9Y5W7 946 aa19.64■□□□□ 0.73
LDB3-208ENST00000623007 AFF2P51816 1311 aa19.64■□□□□ 0.73
LDB3-208ENST00000623007 RPS6KA4O75676 772 aa19.63■□□□□ 0.73
LDB3-208ENST00000623007 PDIA4P13667 645 aaKnown RBP19.63■□□□□ 0.73
LDB3-208ENST00000623007 DNAJC2Q99543 621 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms