RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 MAP1SQ66K74 1059 aaPredicted RBP27.14■■□□□ 1.94
PMPCA-212ENST00000622209 ANKRD13DQ6ZTN6 518 aa27.14■■□□□ 1.94
PMPCA-212ENST00000622209 NIM1KQ8IY84 436 aa27.14■■□□□ 1.94
PMPCA-212ENST00000622209 PLBD2Q8NHP8 589 aa27.14■■□□□ 1.94
PMPCA-212ENST00000622209 DBF4Q9UBU7 674 aaPredicted RBP27.14■■□□□ 1.94
PMPCA-212ENST00000622209 DDX46Q7L014 1031 aaKnown RBP27.13■■□□□ 1.93
PMPCA-212ENST00000622209 ATP5J2-PTCD1G3V325 749 aa27.12■■□□□ 1.93
PMPCA-212ENST00000622209 LMOD1P29536 600 aaPredicted RBP27.12■■□□□ 1.93
PMPCA-212ENST00000622209 CNTROBQ8N137 903 aa27.12■■□□□ 1.93
PMPCA-212ENST00000622209 TSPYL6Q8N831 410 aa27.12■■□□□ 1.93
PMPCA-212ENST00000622209 SPINK5Q9NQ38 1064 aaPredicted RBP27.12■■□□□ 1.93
PMPCA-212ENST00000622209 EPS15P42566 896 aa27.11■■□□□ 1.93
PMPCA-212ENST00000622209 DPP8Q6V1X1 898 aaPredicted RBP27.11■■□□□ 1.93
PMPCA-212ENST00000622209 SP8Q8IXZ3 490 aa27.11■■□□□ 1.93
PMPCA-212ENST00000622209 TMEM88BA6NKF7 163 aa27.1■■□□□ 1.93
PMPCA-212ENST00000622209 TWISTNBQ3B726 338 aaPredicted RBP27.1■■□□□ 1.93
PMPCA-212ENST00000622209 CCDC30Q5VVM6 783 aa27.1■■□□□ 1.93
PMPCA-212ENST00000622209 HYPKQ9NX55 129 aa27.1■■□□□ 1.93
PMPCA-212ENST00000622209 SCN4AP35499 1836 aa27.1■■□□□ 1.93
PMPCA-212ENST00000622209 SCNN1DP51172 638 aa27.09■■□□□ 1.93
PMPCA-212ENST00000622209 GRAPQ13588 217 aa27.09■■□□□ 1.93
PMPCA-212ENST00000622209 MPNDQ8N594 471 aa27.09■■□□□ 1.93
PMPCA-212ENST00000622209 SUPT20HQ8NEM7 779 aa27.09■■□□□ 1.93
PMPCA-212ENST00000622209 GRAPLQ8TC17 118 aaPredicted RBP27.09■■□□□ 1.93
PMPCA-212ENST00000622209 FAM89AQ96GI7 184 aa27.09■■□□□ 1.93
PMPCA-212ENST00000622209 ISCA1Q9BUE6 129 aa27.09■■□□□ 1.93
PMPCA-212ENST00000622209 RTL5Q5HYW3 569 aaPredicted RBP27.08■■□□□ 1.93
PMPCA-212ENST00000622209 RTFDC1Q9BY42 306 aaPredicted RBP27.08■■□□□ 1.93
PMPCA-212ENST00000622209 VPS33BQ9H267 617 aa27.08■■□□□ 1.93
PMPCA-212ENST00000622209 E9PSI1 815 aa27.07■■□□□ 1.92
PMPCA-212ENST00000622209 EXOSC9Q06265 439 aaKnown RBP27.06■■□□□ 1.92
PMPCA-212ENST00000622209 ZNRF3Q9ULT6 936 aa27.06■■□□□ 1.92
PMPCA-212ENST00000622209 CNTNAP1P78357 1384 aa27.06■■□□□ 1.92
PMPCA-212ENST00000622209 CXCL9Q07325 125 aa27.05■■□□□ 1.92
PMPCA-212ENST00000622209 RIC3Q7Z5B4 369 aa27.04■■□□□ 1.92
PMPCA-212ENST00000622209 PHAXQ9H814 394 aaKnown RBP27.04■■□□□ 1.92
PMPCA-212ENST00000622209 VAMP4O75379 141 aa27.03■■□□□ 1.92
PMPCA-212ENST00000622209 VEGFBP49765 207 aa27.03■■□□□ 1.92
PMPCA-212ENST00000622209 SLFN5Q08AF3 891 aa27.03■■□□□ 1.92
PMPCA-212ENST00000622209 KIAA2012Q0VF49 1180 aa27.02■■□□□ 1.92
PMPCA-212ENST00000622209 USP50Q70EL3 339 aaPredicted RBP27.02■■□□□ 1.92
PMPCA-212ENST00000622209 TNS4Q8IZW8 715 aa27.02■■□□□ 1.92
PMPCA-212ENST00000622209 STK31Q9BXU1 1019 aa27.02■■□□□ 1.92
PMPCA-212ENST00000622209 RAD17O75943 681 aa27.01■■□□□ 1.91
PMPCA-212ENST00000622209 FMR1Q06787 632 aaKnown RBP eCLIP27.01■■□□□ 1.91
PMPCA-212ENST00000622209 SF3B3Q15393 1217 aaKnown RBP27.01■■□□□ 1.91
PMPCA-212ENST00000622209 CELF1Q92879 486 aaKnown RBP27.01■■□□□ 1.91
PMPCA-212ENST00000622209 GPRC5DQ9NZD1 345 aa27.01■■□□□ 1.91
PMPCA-212ENST00000622209 IRS4O14654 1257 aaPredicted RBP27■■□□□ 1.91
PMPCA-212ENST00000622209 GMPSP49915 693 aaPredicted RBP27■■□□□ 1.91
PMPCA-212ENST00000622209 TRIM28Q13263 835 aaKnown RBP27■■□□□ 1.91
PMPCA-212ENST00000622209 TMC4Q7Z404 712 aa27■■□□□ 1.91
PMPCA-212ENST00000622209 ADAMTSL1Q8N6G6 1762 aa26.99■■□□□ 1.91
PMPCA-212ENST00000622209 CIAPIN1Q6FI81 312 aa26.99■■□□□ 1.91
PMPCA-212ENST00000622209 ADARB2Q9NS39 739 aaKnown RBP26.99■■□□□ 1.91
PMPCA-212ENST00000622209 ABT1Q9ULW3 272 aaKnown RBP26.99■■□□□ 1.91
PMPCA-212ENST00000622209 DEFB115Q30KQ5 88 aa26.98■■□□□ 1.91
PMPCA-212ENST00000622209 TRMT2AQ8IZ69 625 aaKnown RBP26.98■■□□□ 1.91
PMPCA-212ENST00000622209 MYD88Q99836 296 aa26.98■■□□□ 1.91
PMPCA-212ENST00000622209 NSFL1CQ9UNZ2 370 aaKnown RBP26.98■■□□□ 1.91
PMPCA-212ENST00000622209 ANKRD36CQ5JPF3 1778 aa26.98■■□□□ 1.91
PMPCA-212ENST00000622209 LTBP1Q14766 1721 aa26.98■■□□□ 1.91
PMPCA-212ENST00000622209 CAPN15O75808 1086 aa26.97■■□□□ 1.91
PMPCA-212ENST00000622209 CDCA7LQ96GN5 454 aa26.97■■□□□ 1.91
PMPCA-212ENST00000622209 BCL2L13Q9BXK5 485 aa26.97■■□□□ 1.91
PMPCA-212ENST00000622209 TRAF5O00463 557 aa26.96■■□□□ 1.91
PMPCA-212ENST00000622209 SLC4A2P04920 1241 aa26.96■■□□□ 1.91
PMPCA-212ENST00000622209 HNRNPUQ00839 825 aaKnown RBP eCLIP26.96■■□□□ 1.91
PMPCA-212ENST00000622209 TNIP1Q15025 636 aa26.96■■□□□ 1.91
PMPCA-212ENST00000622209 RASSF10A6NK89 507 aa26.95■■□□□ 1.9
PMPCA-212ENST00000622209 YDJCA8MPS7 323 aa26.95■■□□□ 1.9
PMPCA-212ENST00000622209 RIMBP2O15034 1052 aa26.95■■□□□ 1.9
PMPCA-212ENST00000622209 GPSM2P81274 684 aa26.95■■□□□ 1.9
PMPCA-212ENST00000622209 WASHC4Q2M389 1173 aa26.95■■□□□ 1.9
PMPCA-212ENST00000622209 ZBTB38Q8NAP3 1195 aaPredicted RBP26.95■■□□□ 1.9
PMPCA-212ENST00000622209 JARID2Q92833 1246 aaPredicted RBP26.95■■□□□ 1.9
PMPCA-212ENST00000622209 C6orf229H3BNL8 230 aa26.94■■□□□ 1.9
PMPCA-212ENST00000622209 FOXN1O15353 648 aa26.94■■□□□ 1.9
PMPCA-212ENST00000622209 DDX58O95786 925 aaKnown RBP26.94■■□□□ 1.9
PMPCA-212ENST00000622209 LAMB2P55268 1798 aa26.94■■□□□ 1.9
PMPCA-212ENST00000622209 RPS8P62241 208 aaKnown RBP26.93■■□□□ 1.9
PMPCA-212ENST00000622209 POLLQ9UGP5 575 aa26.93■■□□□ 1.9
PMPCA-212ENST00000622209 AIDAQ96BJ3 306 aa26.92■■□□□ 1.9
PMPCA-212ENST00000622209 DBNDD1Q9H9R9 158 aa26.92■■□□□ 1.9
PMPCA-212ENST00000622209 SEC31BQ9NQW1 1179 aa26.92■■□□□ 1.9
PMPCA-212ENST00000622209 CST9Q5W186 159 aa26.91■■□□□ 1.9
PMPCA-212ENST00000622209 CNOT7Q9UIV1 285 aaKnown RBP26.91■■□□□ 1.9
PMPCA-212ENST00000622209 WDR33Q9C0J8 1336 aaKnown RBP26.9■■□□□ 1.9
PMPCA-212ENST00000622209 SHTN1A0MZ66 631 aa26.9■■□□□ 1.9
PMPCA-212ENST00000622209 PAXIP1Q6ZW49 1069 aaPredicted RBP26.9■■□□□ 1.9
PMPCA-212ENST00000622209 CCDC191Q8NCU4 936 aa26.9■■□□□ 1.9
PMPCA-212ENST00000622209 GPR101Q96P66 508 aaPredicted RBP26.9■■□□□ 1.9
PMPCA-212ENST00000622209 CCDC85AQ96PX6 553 aaPredicted RBP26.9■■□□□ 1.9
PMPCA-212ENST00000622209 METTL22Q9BUU2 404 aaPredicted RBP26.9■■□□□ 1.9
PMPCA-212ENST00000622209 CWC25Q9NXE8 425 aaPredicted RBP26.9■■□□□ 1.9
PMPCA-212ENST00000622209 ZBTB12Q9Y330 459 aaPredicted RBP26.9■■□□□ 1.9
PMPCA-212ENST00000622209 PCCAP05165 728 aaPredicted RBP26.89■■□□□ 1.9
PMPCA-212ENST00000622209 HSP90B1P14625 803 aaKnown RBP26.89■■□□□ 1.9
PMPCA-212ENST00000622209 HIRAP54198 1017 aaPredicted RBP26.89■■□□□ 1.9
PMPCA-212ENST00000622209 DOK7Q18PE1 504 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms