RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 PAG1Q9NWQ8 432 aa10.77□□□□□ -0.68
GGA3-223ENST00000621870 TSPY3P0CV98 308 aa10.77□□□□□ -0.69
GGA3-223ENST00000621870 TSPY8P0CW00 308 aa10.77□□□□□ -0.69
GGA3-223ENST00000621870 CCDC192P0DO97 292 aa10.77□□□□□ -0.69
GGA3-223ENST00000621870 MATR3P43243 847 aaKnown RBP eCLIP10.77□□□□□ -0.69
GGA3-223ENST00000621870 NUCB1Q02818 461 aa10.77□□□□□ -0.69
GGA3-223ENST00000621870 IL17REQ8NFR9 667 aa10.77□□□□□ -0.69
GGA3-223ENST00000621870 METTL22Q9BUU2 404 aaPredicted RBP10.77□□□□□ -0.69
GGA3-223ENST00000621870 MCM9Q9NXL9 1143 aa10.77□□□□□ -0.69
GGA3-223ENST00000621870 TFIP11Q9UBB9 837 aaKnown RBP10.77□□□□□ -0.69
GGA3-223ENST00000621870 TRPC5Q9UL62 973 aaPredicted RBP10.77□□□□□ -0.69
GGA3-223ENST00000621870 TRIM35Q9UPQ4 493 aa10.77□□□□□ -0.69
GGA3-223ENST00000621870 SYCP1Q15431 976 aa10.77□□□□□ -0.69
GGA3-223ENST00000621870 CCDC191Q8NCU4 936 aa10.77□□□□□ -0.69
GGA3-223ENST00000621870 CHD1O14646 1710 aa10.77□□□□□ -0.69
GGA3-223ENST00000621870 LDHBP07195 334 aaKnown RBP10.76□□□□□ -0.69
GGA3-223ENST00000621870 SSRP1Q08945 709 aaKnown RBP10.76□□□□□ -0.69
GGA3-223ENST00000621870 CEP57L1Q8IYX8 460 aa10.76□□□□□ -0.69
GGA3-223ENST00000621870 ESR2Q92731 530 aa10.76□□□□□ -0.69
GGA3-223ENST00000621870 ABCA8O94911 1581 aa10.76□□□□□ -0.69
GGA3-223ENST00000621870 KLF18A0A0U1RQI7 1052 aa10.76□□□□□ -0.69
GGA3-223ENST00000621870 MCM5P33992 734 aa10.76□□□□□ -0.69
GGA3-223ENST00000621870 METAP2P50579 478 aaKnown RBP eCLIP10.76□□□□□ -0.69
GGA3-223ENST00000621870 WTAPQ15007 396 aa10.76□□□□□ -0.69
GGA3-223ENST00000621870 TSPY26PQ9H489 355 aa10.76□□□□□ -0.69
GGA3-223ENST00000621870 RBM8AQ9Y5S9 174 aaKnown RBP10.76□□□□□ -0.69
GGA3-223ENST00000621870 ROBO2Q9HCK4 1378 aa10.76□□□□□ -0.69
GGA3-223ENST00000621870 SBNO2Q9Y2G9 1366 aa10.76□□□□□ -0.69
GGA3-223ENST00000621870 LETM1O95202 739 aaPredicted RBP10.76□□□□□ -0.69
GGA3-223ENST00000621870 PHKG2P15735 406 aa10.76□□□□□ -0.69
GGA3-223ENST00000621870 KCNQ4P56696 695 aa10.76□□□□□ -0.69
GGA3-223ENST00000621870 MCMDC2Q4G0Z9 681 aa10.76□□□□□ -0.69
GGA3-223ENST00000621870 SPC24Q8NBT2 197 aa10.76□□□□□ -0.69
GGA3-223ENST00000621870 SLC26A6Q9BXS9 759 aa10.76□□□□□ -0.69
GGA3-223ENST00000621870 ANKRD2Q9GZV1 360 aa10.76□□□□□ -0.69
GGA3-223ENST00000621870 MLH3Q9UHC1 1453 aa10.76□□□□□ -0.69
GGA3-223ENST00000621870 EYA2O00167 538 aa10.75□□□□□ -0.69
GGA3-223ENST00000621870 ARHGEF25Q86VW2 580 aa10.75□□□□□ -0.69
GGA3-223ENST00000621870 PANK2Q9BZ23 570 aa10.75□□□□□ -0.69
GGA3-223ENST00000621870 NUP62CLQ9H1M0 184 aa10.75□□□□□ -0.69
GGA3-223ENST00000621870 CEP131Q9UPN4 1083 aa10.75□□□□□ -0.69
GGA3-223ENST00000621870 A0A1B0GUL7 405 aa10.75□□□□□ -0.69
GGA3-223ENST00000621870 TAF5LO75529 589 aa10.75□□□□□ -0.69
GGA3-223ENST00000621870 HOXB7P09629 217 aa10.75□□□□□ -0.69
GGA3-223ENST00000621870 NBPF7P0C2Y1 421 aaPredicted RBP10.75□□□□□ -0.69
GGA3-223ENST00000621870 EIF4A1P60842 406 aaKnown RBP10.75□□□□□ -0.69
GGA3-223ENST00000621870 MAGEB6Q8N7X4 407 aa10.75□□□□□ -0.69
GGA3-223ENST00000621870 UBA5Q9GZZ9 404 aa10.75□□□□□ -0.69
GGA3-223ENST00000621870 CIZ1Q9ULV3 898 aaPredicted RBP10.75□□□□□ -0.69
GGA3-223ENST00000621870 SOS1Q07889 1333 aaPredicted RBP10.75□□□□□ -0.69
GGA3-223ENST00000621870 PLEKHG1Q9ULL1 1385 aa10.75□□□□□ -0.69
GGA3-223ENST00000621870 H0YIN7 160 aa10.75□□□□□ -0.69
GGA3-223ENST00000621870 TRIM37O94972 964 aa10.75□□□□□ -0.69
GGA3-223ENST00000621870 KLHL10Q6JEL2 608 aa10.75□□□□□ -0.69
GGA3-223ENST00000621870 DCTPP1Q9H773 170 aa10.75□□□□□ -0.69
GGA3-223ENST00000621870 ZBTB40Q9NUA8 1239 aa10.75□□□□□ -0.69
GGA3-223ENST00000621870 PDE8AO60658 829 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 MRE11P49959 708 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 LARGE2Q8N3Y3 721 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 NECAB1Q8N987 351 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 EFCAB6Q5THR3 1501 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 MAGI2Q86UL8 1455 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 USP19O94966 1318 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 MAGEB6P1A0A0J9YX57 407 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 ERVV-2B6SEH9 535 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 NF2P35240 595 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 RBM17Q96I25 401 aaKnown RBP10.74□□□□□ -0.69
GGA3-223ENST00000621870 GDPD2Q9HCC8 539 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 ASAP1Q9ULH1 1129 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 UGGT1Q9NYU2 1555 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 MCM4P33991 863 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 CAMK4Q16566 473 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 CHST3Q7LGC8 479 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 DBNDD2Q9BQY9 259 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 RAB34Q9BZG1 259 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 ZBTB43O43298 467 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 PDIA4P13667 645 aaKnown RBP10.74□□□□□ -0.69
GGA3-223ENST00000621870 IDEP14735 1019 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 IFIT1BQ5T764 474 aaKnown RBP10.74□□□□□ -0.69
GGA3-223ENST00000621870 ZNHIT6Q9NWK9 470 aaKnown RBP10.74□□□□□ -0.69
GGA3-223ENST00000621870 HMG20BQ9P0W2 317 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 SAMM50Q9Y512 469 aa10.74□□□□□ -0.69
GGA3-223ENST00000621870 LOC102724428A0A0B4J2F2 783 aa10.73□□□□□ -0.69
GGA3-223ENST00000621870 GIGYF1O75420 1035 aaPredicted RBP10.73□□□□□ -0.69
GGA3-223ENST00000621870 SIK1P57059 783 aa10.73□□□□□ -0.69
GGA3-223ENST00000621870 DPP8Q6V1X1 898 aaPredicted RBP10.73□□□□□ -0.69
GGA3-223ENST00000621870 KRI1Q8N9T8 703 aaKnown RBP10.73□□□□□ -0.69
GGA3-223ENST00000621870 SCAND2PQ9GZW5 306 aaPredicted RBP10.73□□□□□ -0.69
GGA3-223ENST00000621870 BABAM1Q9NWV8 329 aa10.73□□□□□ -0.69
GGA3-223ENST00000621870 NPC1L1Q9UHC9 1359 aa10.73□□□□□ -0.69
GGA3-223ENST00000621870 PRR36Q9H6K5 1346 aa10.73□□□□□ -0.69
GGA3-223ENST00000621870 HIBADHP31937 336 aaKnown RBP10.73□□□□□ -0.69
GGA3-223ENST00000621870 NMIQ13287 307 aaPredicted RBP10.73□□□□□ -0.69
GGA3-223ENST00000621870 GCKRQ14397 625 aa10.73□□□□□ -0.69
GGA3-223ENST00000621870 TTLL7Q6ZT98 887 aa10.73□□□□□ -0.69
GGA3-223ENST00000621870 FILIP1Q7Z7B0 1213 aa10.73□□□□□ -0.69
GGA3-223ENST00000621870 ZNF408Q9H9D4 720 aa10.73□□□□□ -0.69
GGA3-223ENST00000621870 DACH1Q9UI36 760 aa10.73□□□□□ -0.69
GGA3-223ENST00000621870 LMOD1P29536 600 aaPredicted RBP10.73□□□□□ -0.69
GGA3-223ENST00000621870 TBC1D2Q9BYX2 928 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms