RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 CCDC24Q8N4L8 307 aa22.99■■□□□ 1.27
SEMA6C-210ENST00000621728 ANO8Q9HCE9 1232 aaPredicted RBP22.99■■□□□ 1.27
SEMA6C-210ENST00000621728 CASZ1Q86V15 1759 aa22.99■■□□□ 1.27
SEMA6C-210ENST00000621728 GREM2Q9H772 168 aa22.98■■□□□ 1.27
SEMA6C-210ENST00000621728 G3BP1Q13283 466 aaKnown RBP eCLIP22.98■■□□□ 1.27
SEMA6C-210ENST00000621728 NFIXQ14938 502 aa22.98■■□□□ 1.27
SEMA6C-210ENST00000621728 COL23A1Q86Y22 540 aaPredicted RBP22.98■■□□□ 1.27
SEMA6C-210ENST00000621728 KIF1BPQ96EK5 621 aa22.98■■□□□ 1.27
SEMA6C-210ENST00000621728 ABCC12Q96J65 1359 aa22.98■■□□□ 1.27
SEMA6C-210ENST00000621728 HSP90AB4PQ58FF6 505 aa22.97■■□□□ 1.27
SEMA6C-210ENST00000621728 MSH5O43196 834 aa22.96■■□□□ 1.27
SEMA6C-210ENST00000621728 SF3B2Q13435 895 aaKnown RBP22.96■■□□□ 1.27
SEMA6C-210ENST00000621728 TSHZ3Q63HK5 1081 aa22.96■■□□□ 1.27
SEMA6C-210ENST00000621728 C3orf67Q6ZVT6 689 aa22.96■■□□□ 1.27
SEMA6C-210ENST00000621728 NBPF5PQ86XG9 351 aaPredicted RBP22.96■■□□□ 1.27
SEMA6C-210ENST00000621728 PUS3Q9BZE2 481 aaKnown RBP22.96■■□□□ 1.27
SEMA6C-210ENST00000621728 CCDC57Q2TAC2 916 aa22.95■■□□□ 1.26
SEMA6C-210ENST00000621728 PNPLA7Q6ZV29 1317 aa22.94■■□□□ 1.26
SEMA6C-210ENST00000621728 SALL3Q9BXA9 1300 aa22.94■■□□□ 1.26
SEMA6C-210ENST00000621728 ITGA6P23229 1130 aa22.94■■□□□ 1.26
SEMA6C-210ENST00000621728 BAG6P46379 1132 aa22.94■■□□□ 1.26
SEMA6C-210ENST00000621728 LRRC24Q50LG9 513 aa22.94■■□□□ 1.26
SEMA6C-210ENST00000621728 ATG9AQ7Z3C6 839 aa22.94■■□□□ 1.26
SEMA6C-210ENST00000621728 GTF2E1P29083 439 aaPredicted RBP22.93■■□□□ 1.26
SEMA6C-210ENST00000621728 IFIT5Q13325 482 aaKnown RBP22.93■■□□□ 1.26
SEMA6C-210ENST00000621728 ERC1Q8IUD2 1116 aa22.93■■□□□ 1.26
SEMA6C-210ENST00000621728 COL4A1P02462 1669 aa22.93■■□□□ 1.26
SEMA6C-210ENST00000621728 TFCP2Q12800 502 aa22.92■■□□□ 1.26
SEMA6C-210ENST00000621728 CARMIL3Q8ND23 1372 aa22.92■■□□□ 1.26
SEMA6C-210ENST00000621728 HMGB2P26583 209 aaKnown RBP22.92■■□□□ 1.26
SEMA6C-210ENST00000621728 GSPT1P15170 499 aaKnown RBP22.91■■□□□ 1.26
SEMA6C-210ENST00000621728 C8orf34Q49A92 452 aa22.91■■□□□ 1.26
SEMA6C-210ENST00000621728 TAF7LQ5H9L4 462 aa22.91■■□□□ 1.26
SEMA6C-210ENST00000621728 NYXQ9GZU5 481 aa22.91■■□□□ 1.26
SEMA6C-210ENST00000621728 SEC31BQ9NQW1 1179 aa22.91■■□□□ 1.26
SEMA6C-210ENST00000621728 SPEF2Q9C093 1822 aa22.91■■□□□ 1.26
SEMA6C-210ENST00000621728 TNRC6CQ9HCJ0 1690 aaKnown RBP22.91■■□□□ 1.26
SEMA6C-210ENST00000621728 TAF1P21675 1872 aa22.91■■□□□ 1.26
SEMA6C-210ENST00000621728 PDE1AP54750 535 aa22.9■■□□□ 1.26
SEMA6C-210ENST00000621728 ANKRD18BA2A2Z9 1011 aa22.9■■□□□ 1.26
SEMA6C-210ENST00000621728 EYA2O00167 538 aa22.9■■□□□ 1.26
SEMA6C-210ENST00000621728 MX1P20591 662 aa22.9■■□□□ 1.26
SEMA6C-210ENST00000621728 TM4SF1P30408 202 aa22.9■■□□□ 1.26
SEMA6C-210ENST00000621728 DDR1Q08345 913 aa22.9■■□□□ 1.26
SEMA6C-210ENST00000621728 SLC15A2Q16348 729 aa22.9■■□□□ 1.26
SEMA6C-210ENST00000621728 EAF2Q96CJ1 260 aaPredicted RBP22.9■■□□□ 1.26
SEMA6C-210ENST00000621728 TPTE2Q6XPS3 522 aa22.89■■□□□ 1.25
SEMA6C-210ENST00000621728 AACSQ86V21 672 aa22.89■■□□□ 1.25
SEMA6C-210ENST00000621728 CLASRPQ8N2M8 674 aaKnown RBP22.89■■□□□ 1.25
SEMA6C-210ENST00000621728 TLR7Q9NYK1 1049 aaKnown RBP22.89■■□□□ 1.25
SEMA6C-210ENST00000621728 SLC10A5Q5PT55 438 aa22.88■■□□□ 1.25
SEMA6C-210ENST00000621728 TTC22Q5TAA0 569 aa22.88■■□□□ 1.25
SEMA6C-210ENST00000621728 BACH2Q9BYV9 841 aa22.88■■□□□ 1.25
SEMA6C-210ENST00000621728 CCDC8Q9H0W5 538 aaPredicted RBP22.88■■□□□ 1.25
SEMA6C-210ENST00000621728 STK32BQ9NY57 414 aa22.88■■□□□ 1.25
SEMA6C-210ENST00000621728 MSL1Q68DK7 614 aa22.88■■□□□ 1.25
SEMA6C-210ENST00000621728 NPHP1O15259 732 aa22.87■■□□□ 1.25
SEMA6C-210ENST00000621728 CCDC152Q4G0S7 254 aa22.87■■□□□ 1.25
SEMA6C-210ENST00000621728 LRP5O75197 1615 aa22.87■■□□□ 1.25
SEMA6C-210ENST00000621728 SERPINB2P05120 415 aa22.86■■□□□ 1.25
SEMA6C-210ENST00000621728 IL15P40933 162 aaPredicted RBP22.86■■□□□ 1.25
SEMA6C-210ENST00000621728 PRR5LQ6MZQ0 368 aa22.86■■□□□ 1.25
SEMA6C-210ENST00000621728 CNBD1Q8NA66 436 aa22.86■■□□□ 1.25
SEMA6C-210ENST00000621728 FLAD1Q8NFF5 587 aa22.86■■□□□ 1.25
SEMA6C-210ENST00000621728 POLRMTO00411 1230 aaKnown RBP22.86■■□□□ 1.25
SEMA6C-210ENST00000621728 CIAO1O76071 339 aa22.86■■□□□ 1.25
SEMA6C-210ENST00000621728 RIC1Q4ADV7 1423 aa22.86■■□□□ 1.25
SEMA6C-210ENST00000621728 BMP2KLQ5H9B9 411 aa22.86■■□□□ 1.25
SEMA6C-210ENST00000621728 OSBPL3Q9H4L5 887 aa22.86■■□□□ 1.25
SEMA6C-210ENST00000621728 HSP90B1P14625 803 aaKnown RBP22.85■■□□□ 1.25
SEMA6C-210ENST00000621728 LDHAL6AQ6ZMR3 332 aa22.85■■□□□ 1.25
SEMA6C-210ENST00000621728 PDGFDQ9GZP0 370 aaPredicted RBP22.85■■□□□ 1.25
SEMA6C-210ENST00000621728 STAP2Q9UGK3 403 aa22.85■■□□□ 1.25
SEMA6C-210ENST00000621728 IFIT2P09913 472 aaKnown RBP22.84■■□□□ 1.25
SEMA6C-210ENST00000621728 TNNI3KQ59H18 835 aa22.84■■□□□ 1.25
SEMA6C-210ENST00000621728 FPGT-TNNI3KV9GXZ4 949 aa22.84■■□□□ 1.25
SEMA6C-210ENST00000621728 QSER1Q2KHR3 1735 aa22.84■■□□□ 1.25
SEMA6C-210ENST00000621728 SF3B3Q15393 1217 aaKnown RBP22.84■■□□□ 1.25
SEMA6C-210ENST00000621728 RIPOR2Q9Y4F9 1068 aa22.84■■□□□ 1.25
SEMA6C-210ENST00000621728 RTL9Q8NET4 1388 aa22.83■■□□□ 1.25
SEMA6C-210ENST00000621728 CNNM1Q9NRU3 951 aa22.83■■□□□ 1.25
SEMA6C-210ENST00000621728 PI4K2BQ8TCG2 481 aa22.82■■□□□ 1.24
SEMA6C-210ENST00000621728 NLRP3Q96P20 1036 aa22.82■■□□□ 1.24
SEMA6C-210ENST00000621728 ANP32AP39687 249 aaKnown RBP22.82■■□□□ 1.24
SEMA6C-210ENST00000621728 ERICH6Q7L0X2 663 aa22.82■■□□□ 1.24
SEMA6C-210ENST00000621728 NLGN1Q8N2Q7 840 aa22.82■■□□□ 1.24
SEMA6C-210ENST00000621728 DBNLQ9UJU6 430 aaKnown RBP22.82■■□□□ 1.24
SEMA6C-210ENST00000621728 SDSP20132 328 aa22.81■■□□□ 1.24
SEMA6C-210ENST00000621728 TIMM10P62072 90 aa22.81■■□□□ 1.24
SEMA6C-210ENST00000621728 SEC24BO95487 1268 aa22.8■■□□□ 1.24
SEMA6C-210ENST00000621728 MAP4K4O95819 1239 aaPredicted RBP22.8■■□□□ 1.24
SEMA6C-210ENST00000621728 METTL24Q5JXM2 366 aa22.8■■□□□ 1.24
SEMA6C-210ENST00000621728 DBNDD2Q9BQY9 259 aa22.8■■□□□ 1.24
SEMA6C-210ENST00000621728 CEP126Q9P2H0 1117 aa22.8■■□□□ 1.24
SEMA6C-210ENST00000621728 FBXO3Q9UK99 471 aa22.8■■□□□ 1.24
SEMA6C-210ENST00000621728 ZNF609O15014 1411 aa22.8■■□□□ 1.24
SEMA6C-210ENST00000621728 MMP10P09238 476 aa22.8■■□□□ 1.24
SEMA6C-210ENST00000621728 CCDC125Q86Z20 511 aa22.8■■□□□ 1.24
SEMA6C-210ENST00000621728 HELBQ8NG08 1087 aaPredicted RBP22.8■■□□□ 1.24
SEMA6C-210ENST00000621728 CELF1Q92879 486 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms