RNA–Protein interactions for RNA: ENST00000619199.4

ATP13A3-211, Transcript of ATPase 13A3, humanhuman

TSL 2 BASIC

Gene ATP13A3, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-211ENST00000619199 PRIMPOLQ96LW4 560 aa5.48□□□□□ -1.53
ATP13A3-211ENST00000619199 TMCO5BA8MYB1 307 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 CASQ2O14958 399 aaPredicted RBP5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 PSMC4P43686 418 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 MTIF2P46199 727 aaKnown RBP5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 PROSER2Q86WR7 435 aaPredicted RBP5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 SYCP3Q8IZU3 236 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 SPC24Q8NBT2 197 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 HAUS8Q9BT25 410 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 CSRNP2Q9H175 543 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 BCAP29Q9UHQ4 241 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 POLR3AO14802 1390 aaPredicted RBP5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 BAG3O95817 575 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 ATP5DP30049 168 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 TAF12Q16514 161 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 CFAP58Q5T655 872 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 THEMISQ8N1K5 641 aaPredicted RBP5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 OTUD6BQ8N6M0 293 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 CTAGE1Q96RT6 745 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 NAP1L4Q99733 375 aaKnown RBP5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 UBA5Q9GZZ9 404 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 VIRMAQ69YN4 1812 aaKnown RBP5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 KDM5DQ9BY66 1539 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 MGEA5O60502 916 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 ZPR1O75312 459 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 SLC5A1P13866 664 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 RFX1P22670 979 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 TRPC3Q13507 836 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 TTF1Q15361 905 aaPredicted RBP5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 SRGAP1Q7Z6B7 1085 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 CATIPQ7Z7H3 387 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.47□□□□□ -1.539e-7■□□□□ 11
ATP13A3-211ENST00000619199 DDX19AQ9NUU7 478 aaKnown RBP5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 ASXL1Q8IXJ9 1541 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 LRRIQ1Q96JM4 1722 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 PPFIA2O75334 1257 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 CYLC1P35663 651 aaPredicted RBP5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 TWISTNBQ3B726 338 aaPredicted RBP5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 TOM1L2Q6ZVM7 507 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 TCP11L2Q8N4U5 519 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 NUP88Q99567 741 aaPredicted RBP5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 RBM27Q9P2N5 1060 aaKnown RBP5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 HDAC9Q9UKV0 1011 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 FAM169AQ9Y6X4 670 aa5.47□□□□□ -1.53
ATP13A3-211ENST00000619199 NBPF7P0C2Y1 421 aaPredicted RBP5.46□□□□□ -1.53
ATP13A3-211ENST00000619199 ATP6V1E1P36543 226 aa5.46□□□□□ -1.53
ATP13A3-211ENST00000619199 GNAQP50148 359 aa5.46□□□□□ -1.53
ATP13A3-211ENST00000619199 CEBPZQ03701 1054 aaKnown RBP5.46□□□□□ -1.53
ATP13A3-211ENST00000619199 WDR78Q5VTH9 848 aa5.46□□□□□ -1.53
ATP13A3-211ENST00000619199 MAATS1Q7Z4T9 603 aa5.46□□□□□ -1.53
ATP13A3-211ENST00000619199 ZNF354CQ86Y25 554 aa5.46□□□□□ -1.53
ATP13A3-211ENST00000619199 ABTB2Q8N961 1025 aa5.46□□□□□ -1.53
ATP13A3-211ENST00000619199 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.46□□□□□ -1.53
ATP13A3-211ENST00000619199 TEX13AQ9BXU3 409 aaPredicted RBP5.46□□□□□ -1.53
ATP13A3-211ENST00000619199 VCX3BQ9H321 246 aa5.46□□□□□ -1.53
ATP13A3-211ENST00000619199 WDR7Q9Y4E6 1490 aa5.46□□□□□ -1.53
ATP13A3-211ENST00000619199 CIB2O75838 187 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 SSRP1Q08945 709 aaKnown RBP5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 NUTM2DQ5VT03 806 aaPredicted RBP5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 FAM177A1Q8N128 213 aaPredicted RBP5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 NAPBQ9H115 298 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 VCXQ9H320 206 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 SPC25Q9HBM1 224 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 RPGRIP1LQ68CZ1 1315 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 A6NNZ2 444 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 FAM177BA6PVY3 158 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 IBSPP21815 317 aaPredicted RBP5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 SATB1Q01826 763 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 SETDB1Q15047 1291 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 TUBB8Q3ZCM7 444 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 DNAJC21Q5F1R6 531 aaKnown RBP5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 RSPH3Q86UC2 560 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 KCTD17Q8N5Z5 321 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 LUC7L2Q9Y383 392 aaKnown RBP5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 POGZQ7Z3K3 1410 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 NUP153P49790 1475 aaKnown RBP5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 GLRX3O76003 335 aaKnown RBP5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 RLBP1P12271 317 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 SLC8A3P57103 927 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 PDE4BQ07343 736 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 BIRC2Q13490 618 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 CFAP157Q5JU67 520 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 KCNH5Q8NCM2 988 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 BICD1Q96G01 975 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 TACC3Q9Y6A5 838 aa5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 PRG4Q92954 1404 aaPredicted RBP5.46□□□□□ -1.54
ATP13A3-211ENST00000619199 GIPC1O14908 333 aa5.45□□□□□ -1.54
ATP13A3-211ENST00000619199 LPXNO60711 386 aa5.45□□□□□ -1.54
ATP13A3-211ENST00000619199 FKBP4Q02790 459 aaKnown RBP eCLIP5.45□□□□□ -1.54
ATP13A3-211ENST00000619199 MSL1Q68DK7 614 aa5.45□□□□□ -1.54
ATP13A3-211ENST00000619199 AACSQ86V21 672 aa5.45□□□□□ -1.54
ATP13A3-211ENST00000619199 CCDC144CPQ8IYA2 1237 aa5.45□□□□□ -1.54
ATP13A3-211ENST00000619199 ZGPATQ8N5A5 531 aaKnown RBP5.45□□□□□ -1.54
ATP13A3-211ENST00000619199 CEP120Q8N960 986 aa5.45□□□□□ -1.54
ATP13A3-211ENST00000619199 TRIM7Q9C029 511 aa5.45□□□□□ -1.54
ATP13A3-211ENST00000619199 FAM8A1Q9UBU6 413 aa5.45□□□□□ -1.54
ATP13A3-211ENST00000619199 PHACTR2O75167 634 aa5.45□□□□□ -1.54
ATP13A3-211ENST00000619199 URI1O94763 535 aaPredicted RBP5.45□□□□□ -1.54
ATP13A3-211ENST00000619199 PPP1R2P41236 205 aa5.45□□□□□ -1.54
ATP13A3-211ENST00000619199 NLRP5P59047 1200 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms