RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 HTRA3P83110 453 aa12.46□□□□□ -0.41
TARDBP-218ENST00000617172 STK31Q9BXU1 1019 aa12.46□□□□□ -0.41
TARDBP-218ENST00000617172 AOC3Q16853 763 aa12.45□□□□□ -0.42
TARDBP-218ENST00000617172 EAPPQ56P03 285 aaPredicted RBP12.45□□□□□ -0.42
TARDBP-218ENST00000617172 CREBZFQ9NS37 354 aa12.45□□□□□ -0.42
TARDBP-218ENST00000617172 ZNRF3Q9ULT6 936 aa12.45□□□□□ -0.42
TARDBP-218ENST00000617172 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
TARDBP-218ENST00000617172 GJA3Q9Y6H8 435 aa12.45□□□□□ -0.42
TARDBP-218ENST00000617172 PCCAP05165 728 aaPredicted RBP12.44□□□□□ -0.42
TARDBP-218ENST00000617172 POTEIP0CG38 1075 aa12.44□□□□□ -0.42
TARDBP-218ENST00000617172 POTEJP0CG39 1038 aa12.44□□□□□ -0.42
TARDBP-218ENST00000617172 KIAA2012Q0VF49 1180 aa12.44□□□□□ -0.42
TARDBP-218ENST00000617172 WDR63Q8IWG1 891 aa12.44□□□□□ -0.42
TARDBP-218ENST00000617172 TSPYL6Q8N831 410 aa12.44□□□□□ -0.42
TARDBP-218ENST00000617172 MYD88Q99836 296 aa12.44□□□□□ -0.42
TARDBP-218ENST00000617172 METTL22Q9BUU2 404 aaPredicted RBP12.44□□□□□ -0.42
TARDBP-218ENST00000617172 CWC25Q9NXE8 425 aaPredicted RBP12.44□□□□□ -0.42
TARDBP-218ENST00000617172 CACNA1SQ13698 1873 aa12.43□□□□□ -0.42
TARDBP-218ENST00000617172 RPS8P62241 208 aaKnown RBP12.43□□□□□ -0.42
TARDBP-218ENST00000617172 NEXNQ0ZGT2 675 aa12.43□□□□□ -0.42
TARDBP-218ENST00000617172 TNIP1Q15025 636 aa12.43□□□□□ -0.42
TARDBP-218ENST00000617172 TWISTNBQ3B726 338 aaPredicted RBP12.43□□□□□ -0.42
TARDBP-218ENST00000617172 RTL5Q5HYW3 569 aaPredicted RBP12.43□□□□□ -0.42
TARDBP-218ENST00000617172 KSR2Q6VAB6 950 aa12.43□□□□□ -0.42
TARDBP-218ENST00000617172 TSR2Q969E8 191 aaKnown RBP12.43□□□□□ -0.42
TARDBP-218ENST00000617172 PASKQ96RG2 1323 aa12.42□□□□□ -0.42
TARDBP-218ENST00000617172 PDE8AO60658 829 aa12.42□□□□□ -0.42
TARDBP-218ENST00000617172 ITGBL1O95965 494 aaPredicted RBP12.42□□□□□ -0.42
TARDBP-218ENST00000617172 CCDC152Q4G0S7 254 aa12.42□□□□□ -0.42
TARDBP-218ENST00000617172 USP50Q70EL3 339 aaPredicted RBP12.42□□□□□ -0.42
TARDBP-218ENST00000617172 CNTROBQ8N137 903 aa12.42□□□□□ -0.42
TARDBP-218ENST00000617172 ZNF428Q96B54 188 aa12.42□□□□□ -0.42
TARDBP-218ENST00000617172 NSFL1CQ9UNZ2 370 aaKnown RBP12.42□□□□□ -0.42
TARDBP-218ENST00000617172 MAP3K2Q9Y2U5 619 aa12.42□□□□□ -0.42
TARDBP-218ENST00000617172 SCN4AP35499 1836 aa12.41□□□□□ -0.42
TARDBP-218ENST00000617172 PI4KAP2A4QPH2 592 aa12.41□□□□□ -0.42
TARDBP-218ENST00000617172 SLC4A2P04920 1241 aa12.41□□□□□ -0.42
TARDBP-218ENST00000617172 SCNN1DP51172 638 aa12.41□□□□□ -0.42
TARDBP-218ENST00000617172 CXCL9Q07325 125 aa12.41□□□□□ -0.42
TARDBP-218ENST00000617172 WASHC4Q2M389 1173 aa12.41□□□□□ -0.42
TARDBP-218ENST00000617172 CIAPIN1Q6FI81 312 aa12.41□□□□□ -0.42
TARDBP-218ENST00000617172 PI4KAP1Q8N8J0 262 aa12.41□□□□□ -0.42
TARDBP-218ENST00000617172 CELF1Q92879 486 aaKnown RBP12.41□□□□□ -0.42
TARDBP-218ENST00000617172 CDHR2Q9BYE9 1310 aa12.4□□□□□ -0.42
TARDBP-218ENST00000617172 TMEM88BA6NKF7 163 aa12.4□□□□□ -0.42
TARDBP-218ENST00000617172 EPS15P42566 896 aa12.4□□□□□ -0.42
TARDBP-218ENST00000617172 SLC51AQ86UW1 340 aa12.4□□□□□ -0.42
TARDBP-218ENST00000617172 EYA3Q99504 573 aa12.4□□□□□ -0.42
TARDBP-218ENST00000617172 ADARB2Q9NS39 739 aaKnown RBP12.4□□□□□ -0.42
TARDBP-218ENST00000617172 GPRC5DQ9NZD1 345 aa12.4□□□□□ -0.42
TARDBP-218ENST00000617172 ANKRD36CQ5JPF3 1778 aa12.4□□□□□ -0.42
TARDBP-218ENST00000617172 C6orf229H3BNL8 230 aa12.39□□□□□ -0.43
TARDBP-218ENST00000617172 IFFO2Q5TF58 517 aa12.39□□□□□ -0.43
TARDBP-218ENST00000617172 MAP1SQ66K74 1059 aaPredicted RBP12.39□□□□□ -0.43
TARDBP-218ENST00000617172 PODXL2Q9NZ53 605 aa12.39□□□□□ -0.43
TARDBP-218ENST00000617172 COL4A5P29400 1685 aa12.38□□□□□ -0.43
TARDBP-218ENST00000617172 IGKV5-2P06315 115 aa12.38□□□□□ -0.43
TARDBP-218ENST00000617172 GPSM2P81274 684 aa12.38□□□□□ -0.43
TARDBP-218ENST00000617172 ANKRD18AQ8IVF6 992 aa12.38□□□□□ -0.43
TARDBP-218ENST00000617172 CDC5LQ99459 802 aaKnown RBP12.38□□□□□ -0.43
TARDBP-218ENST00000617172 BCL2L13Q9BXK5 485 aa12.38□□□□□ -0.43
TARDBP-218ENST00000617172 ZC3H12CQ9C0D7 883 aaKnown RBP12.38□□□□□ -0.43
TARDBP-218ENST00000617172 MYH16Q9H6N6 1097 aa12.38□□□□□ -0.43
TARDBP-218ENST00000617172 POLLQ9UGP5 575 aa12.38□□□□□ -0.43
TARDBP-218ENST00000617172 SALL2Q9Y467 1007 aaPredicted RBP12.38□□□□□ -0.43
TARDBP-218ENST00000617172 FANCIQ9NVI1 1328 aa12.37□□□□□ -0.43
TARDBP-218ENST00000617172 H7C1D1 291 aa12.37□□□□□ -0.43
TARDBP-218ENST00000617172 VAMP4O75379 141 aa12.37□□□□□ -0.43
TARDBP-218ENST00000617172 RAD17O75943 681 aa12.37□□□□□ -0.43
TARDBP-218ENST00000617172 GMPSP49915 693 aaPredicted RBP12.37□□□□□ -0.43
TARDBP-218ENST00000617172 FLIIQ13045 1269 aa12.37□□□□□ -0.43
TARDBP-218ENST00000617172 FAM9BQ8IZU0 186 aa12.37□□□□□ -0.43
TARDBP-218ENST00000617172 TBC1D16Q8TBP0 767 aa12.37□□□□□ -0.43
TARDBP-218ENST00000617172 ZC3H15Q8WU90 426 aaKnown RBP12.37□□□□□ -0.43
TARDBP-218ENST00000617172 DPF2Q92785 391 aa12.37□□□□□ -0.43
TARDBP-218ENST00000617172 SEC31BQ9NQW1 1179 aa12.37□□□□□ -0.43
TARDBP-218ENST00000617172 ANKIB1Q9P2G1 1089 aa12.37□□□□□ -0.43
TARDBP-218ENST00000617172 NEURL1BA8MQ27 555 aa12.36□□□□□ -0.43
TARDBP-218ENST00000617172 G3V3G9 751 aa12.36□□□□□ -0.43
TARDBP-218ENST00000617172 H7C1W4 665 aa12.36□□□□□ -0.43
TARDBP-218ENST00000617172 RIMBP2O15034 1052 aa12.36□□□□□ -0.43
TARDBP-218ENST00000617172 CTSWP56202 376 aa12.36□□□□□ -0.43
TARDBP-218ENST00000617172 FKBP5Q13451 457 aaPredicted RBP12.36□□□□□ -0.43
TARDBP-218ENST00000617172 DCAF8Q5TAQ9 597 aa12.36□□□□□ -0.43
TARDBP-218ENST00000617172 G2E3Q7L622 706 aa12.36□□□□□ -0.43
TARDBP-218ENST00000617172 JARID2Q92833 1246 aaPredicted RBP12.36□□□□□ -0.43
TARDBP-218ENST00000617172 MKRN1Q9UHC7 482 aaKnown RBP12.36□□□□□ -0.43
TARDBP-218ENST00000617172 PGAP2Q9UHJ9 254 aa12.36□□□□□ -0.43
TARDBP-218ENST00000617172 CNOT7Q9UIV1 285 aaKnown RBP12.36□□□□□ -0.43
TARDBP-218ENST00000617172 GGA1Q9UJY5 639 aa12.36□□□□□ -0.43
TARDBP-218ENST00000617172 PCNTO95613 3336 aa12.36□□□□□ -0.43
TARDBP-218ENST00000617172 CNTNAP1P78357 1384 aa12.35□□□□□ -0.43
TARDBP-218ENST00000617172 YDJCA8MPS7 323 aa12.35□□□□□ -0.43
TARDBP-218ENST00000617172 RPS12P25398 132 aaKnown RBP12.35□□□□□ -0.43
TARDBP-218ENST00000617172 EXOSC9Q06265 439 aaKnown RBP12.35□□□□□ -0.43
TARDBP-218ENST00000617172 CWF19L2Q2TBE0 894 aaKnown RBP12.35□□□□□ -0.43
TARDBP-218ENST00000617172 LINS1Q8NG48 757 aa12.35□□□□□ -0.43
TARDBP-218ENST00000617172 TTLL11Q8NHH1 800 aa12.35□□□□□ -0.43
TARDBP-218ENST00000617172 DNAAF4Q8WXU2 420 aa12.35□□□□□ -0.43
TARDBP-218ENST00000617172 DBNDD1Q9H9R9 158 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms