RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 TAF1P21675 1872 aa28.31■■■□□ 2.12
CBWD3-212ENST00000616550 TMC4Q7Z404 712 aa28.3■■■□□ 2.12
CBWD3-212ENST00000616550 DNAAF4Q8WXU2 420 aa28.3■■■□□ 2.12
CBWD3-212ENST00000616550 JARID2Q92833 1246 aaPredicted RBP28.3■■■□□ 2.12
CBWD3-212ENST00000616550 PDE8AO60658 829 aa28.29■■■□□ 2.12
CBWD3-212ENST00000616550 CWF19L2Q2TBE0 894 aaKnown RBP28.29■■■□□ 2.12
CBWD3-212ENST00000616550 MIER1Q8N108 512 aa28.29■■■□□ 2.12
CBWD3-212ENST00000616550 NEURL1BA8MQ27 555 aa28.28■■■□□ 2.12
CBWD3-212ENST00000616550 VEGFAP15692 232 aaPredicted RBP28.28■■■□□ 2.12
CBWD3-212ENST00000616550 SLFN5Q08AF3 891 aa28.28■■■□□ 2.12
CBWD3-212ENST00000616550 SLC51AQ86UW1 340 aa28.28■■■□□ 2.12
CBWD3-212ENST00000616550 JDP2Q8WYK2 163 aa28.28■■■□□ 2.12
CBWD3-212ENST00000616550 CDHR2Q9BYE9 1310 aa28.26■■■□□ 2.11
CBWD3-212ENST00000616550 CCDC152Q4G0S7 254 aa28.26■■■□□ 2.11
CBWD3-212ENST00000616550 MPNDQ8N594 471 aa28.26■■■□□ 2.11
CBWD3-212ENST00000616550 SUPT20HQ8NEM7 779 aa28.26■■■□□ 2.11
CBWD3-212ENST00000616550 DDNO94850 711 aaPredicted RBP28.25■■■□□ 2.11
CBWD3-212ENST00000616550 DPP8Q6V1X1 898 aaPredicted RBP28.25■■■□□ 2.11
CBWD3-212ENST00000616550 CELF1Q92879 486 aaKnown RBP28.25■■■□□ 2.11
CBWD3-212ENST00000616550 LARGE2Q8N3Y3 721 aa28.24■■■□□ 2.11
CBWD3-212ENST00000616550 LINS1Q8NG48 757 aa28.24■■■□□ 2.11
CBWD3-212ENST00000616550 CDCA7LQ96GN5 454 aa28.24■■■□□ 2.11
CBWD3-212ENST00000616550 VPS33BQ9H267 617 aa28.24■■■□□ 2.11
CBWD3-212ENST00000616550 FZD9O00144 591 aa28.23■■■□□ 2.11
CBWD3-212ENST00000616550 RPS8P62241 208 aaKnown RBP28.23■■■□□ 2.11
CBWD3-212ENST00000616550 GCKRQ14397 625 aa28.23■■■□□ 2.11
CBWD3-212ENST00000616550 RBM46Q8TBY0 533 aaKnown RBP28.23■■■□□ 2.11
CBWD3-212ENST00000616550 WDR90Q96KV7 1748 aa28.23■■■□□ 2.11
CBWD3-212ENST00000616550 F6X3S4 739 aa28.22■■■□□ 2.11
CBWD3-212ENST00000616550 H7C1W4 665 aa28.22■■■□□ 2.11
CBWD3-212ENST00000616550 RTFDC1Q9BY42 306 aaPredicted RBP28.22■■■□□ 2.11
CBWD3-212ENST00000616550 PPIP5K2O43314 1243 aa28.21■■■□□ 2.11
CBWD3-212ENST00000616550 UBE3BQ7Z3V4 1068 aa28.21■■■□□ 2.11
CBWD3-212ENST00000616550 SEC31BQ9NQW1 1179 aa28.21■■■□□ 2.11
CBWD3-212ENST00000616550 EIF6P56537 245 aaKnown RBP28.2■■■□□ 2.1
CBWD3-212ENST00000616550 CCDC85AQ96PX6 553 aaPredicted RBP28.2■■■□□ 2.1
CBWD3-212ENST00000616550 ZNF541Q9H0D2 1346 aa28.19■■■□□ 2.1
CBWD3-212ENST00000616550 POTECB2RU33 542 aa28.19■■■□□ 2.1
CBWD3-212ENST00000616550 CTSWP56202 376 aa28.19■■■□□ 2.1
CBWD3-212ENST00000616550 AOC3Q16853 763 aa28.19■■■□□ 2.1
CBWD3-212ENST00000616550 NIM1KQ8IY84 436 aa28.19■■■□□ 2.1
CBWD3-212ENST00000616550 MYH3P11055 1940 aa28.19■■■□□ 2.1
CBWD3-212ENST00000616550 TRMT2AQ8IZ69 625 aaKnown RBP28.18■■■□□ 2.1
CBWD3-212ENST00000616550 NSFL1CQ9UNZ2 370 aaKnown RBP28.18■■■□□ 2.1
CBWD3-212ENST00000616550 HSPA6P17066 643 aa28.17■■■□□ 2.1
CBWD3-212ENST00000616550 BEND3Q5T5X7 828 aa28.17■■■□□ 2.1
CBWD3-212ENST00000616550 TTLL11Q8NHH1 800 aa28.17■■■□□ 2.1
CBWD3-212ENST00000616550 LRRC37AA6NMS7 1700 aa28.16■■■□□ 2.1
CBWD3-212ENST00000616550 IQCA1LA6NCM1 817 aa28.16■■■□□ 2.1
CBWD3-212ENST00000616550 FSTL1Q12841 308 aa28.16■■■□□ 2.1
CBWD3-212ENST00000616550 ANKRD18AQ8IVF6 992 aa28.16■■■□□ 2.1
CBWD3-212ENST00000616550 MRPL50Q8N5N7 158 aaKnown RBP28.16■■■□□ 2.1
CBWD3-212ENST00000616550 L3MBTL3Q96JM7 780 aaPredicted RBP28.16■■■□□ 2.1
CBWD3-212ENST00000616550 SLC4A10Q6U841 1118 aa28.15■■■□□ 2.1
CBWD3-212ENST00000616550 GPC2Q8N158 579 aa28.15■■■□□ 2.1
CBWD3-212ENST00000616550 SMC1BQ8NDV3 1235 aa28.15■■■□□ 2.1
CBWD3-212ENST00000616550 CDC5LQ99459 802 aaKnown RBP28.15■■■□□ 2.1
CBWD3-212ENST00000616550 COL4A1P02462 1669 aa28.14■■■□□ 2.1
CBWD3-212ENST00000616550 COL4A5P29400 1685 aa28.14■■■□□ 2.1
CBWD3-212ENST00000616550 GPSM2P81274 684 aa28.14■■■□□ 2.1
CBWD3-212ENST00000616550 KIAA2012Q0VF49 1180 aa28.14■■■□□ 2.1
CBWD3-212ENST00000616550 PLA2G12BQ9BX93 195 aa28.14■■■□□ 2.1
CBWD3-212ENST00000616550 CASP7P55210 303 aa28.13■■■□□ 2.09
CBWD3-212ENST00000616550 SSH1Q8WYL5 1049 aa28.13■■■□□ 2.09
CBWD3-212ENST00000616550 GJA3Q9Y6H8 435 aa28.13■■■□□ 2.09
CBWD3-212ENST00000616550 SCN4AP35499 1836 aa28.13■■■□□ 2.09
CBWD3-212ENST00000616550 C6orf229H3BNL8 230 aa28.12■■■□□ 2.09
CBWD3-212ENST00000616550 GREM2Q9H772 168 aa28.12■■■□□ 2.09
CBWD3-212ENST00000616550 ZNRF3Q9ULT6 936 aa28.12■■■□□ 2.09
CBWD3-212ENST00000616550 CT47B1P0C2W7 299 aaPredicted RBP28.11■■■□□ 2.09
CBWD3-212ENST00000616550 WASHC4Q2M389 1173 aa28.11■■■□□ 2.09
CBWD3-212ENST00000616550 ALDH1L2Q3SY69 923 aa28.11■■■□□ 2.09
CBWD3-212ENST00000616550 ANKIB1Q9P2G1 1089 aa28.11■■■□□ 2.09
CBWD3-212ENST00000616550 PTPRCP08575 1304 aa28.11■■■□□ 2.09
CBWD3-212ENST00000616550 ALDH1L1O75891 902 aa28.1■■■□□ 2.09
CBWD3-212ENST00000616550 EYA3Q99504 573 aa28.1■■■□□ 2.09
CBWD3-212ENST00000616550 BCL2L13Q9BXK5 485 aa28.1■■■□□ 2.09
CBWD3-212ENST00000616550 SRCIN1Q9C0H9 1055 aa28.1■■■□□ 2.09
CBWD3-212ENST00000616550 POLLQ9UGP5 575 aa28.1■■■□□ 2.09
CBWD3-212ENST00000616550 HACL1Q9UJ83 578 aa28.1■■■□□ 2.09
CBWD3-212ENST00000616550 RTL9Q8NET4 1388 aa28.1■■■□□ 2.09
CBWD3-212ENST00000616550 C9orf78Q9NZ63 289 aaPredicted RBP28.09■■■□□ 2.09
CBWD3-212ENST00000616550 DUOX1Q9NRD9 1551 aa28.08■■■□□ 2.09
CBWD3-212ENST00000616550 GRM8O00222 908 aa28.08■■■□□ 2.09
CBWD3-212ENST00000616550 TAF1DQ9H5J8 278 aaPredicted RBP28.08■■■□□ 2.09
CBWD3-212ENST00000616550 SMC4Q9NTJ3 1288 aa28.08■■■□□ 2.09
CBWD3-212ENST00000616550 PODXL2Q9NZ53 605 aa28.08■■■□□ 2.09
CBWD3-212ENST00000616550 RIMBP2O15034 1052 aa28.07■■■□□ 2.08
CBWD3-212ENST00000616550 CSF1RP07333 972 aa28.07■■■□□ 2.08
CBWD3-212ENST00000616550 TBC1D16Q8TBP0 767 aa28.07■■■□□ 2.08
CBWD3-212ENST00000616550 BSDC1Q9NW68 430 aaPredicted RBP28.07■■■□□ 2.08
CBWD3-212ENST00000616550 GGA1Q9UJY5 639 aa28.07■■■□□ 2.08
CBWD3-212ENST00000616550 ITGA6P23229 1130 aa28.06■■■□□ 2.08
CBWD3-212ENST00000616550 LMOD1P29536 600 aaPredicted RBP28.06■■■□□ 2.08
CBWD3-212ENST00000616550 IGHMBP2P38935 993 aaKnown RBP28.06■■■□□ 2.08
CBWD3-212ENST00000616550 APLP1P51693 650 aa28.06■■■□□ 2.08
CBWD3-212ENST00000616550 CXCL9Q07325 125 aa28.06■■■□□ 2.08
CBWD3-212ENST00000616550 EPHX2P34913 555 aa28.05■■■□□ 2.08
CBWD3-212ENST00000616550 HNRNPUQ00839 825 aaKnown RBP eCLIP28.05■■■□□ 2.08
CBWD3-212ENST00000616550 ZC3H12CQ9C0D7 883 aaKnown RBP28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms