RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 HDAC1Q13547 482 aaPredicted RBP4.43□□□□□ -1.7
LTN1-207ENST00000614971 MFSD6Q6ZSS7 791 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 CTCFLQ8NI51 663 aaPredicted RBP4.43□□□□□ -1.7
LTN1-207ENST00000614971 CDC5LQ99459 802 aaKnown RBP4.43□□□□□ -1.7
LTN1-207ENST00000614971 DCTPP1Q9H773 170 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 TXLNAP40222 546 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 SPECC1Q5M775 1068 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 MNS1Q8NEH6 495 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 DCAF5Q96JK2 942 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 NSD2O96028 1365 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 ROBO2Q9HCK4 1378 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 CHL1O00533 1208 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 NAT10Q9H0A0 1025 aaKnown RBP4.43□□□□□ -1.7
LTN1-207ENST00000614971 MMRN2Q9H8L6 949 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 DDX21Q9NR30 783 aaKnown RBP eCLIP4.43□□□□□ -1.7
LTN1-207ENST00000614971 RTCBQ9Y3I0 505 aaKnown RBP4.43□□□□□ -1.7
LTN1-207ENST00000614971 METAP2P50579 478 aaKnown RBP eCLIP4.43□□□□□ -1.7
LTN1-207ENST00000614971 TCP10Q12799 353 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 SYNE4Q8N205 404 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 MCM9Q9NXL9 1143 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 CCNL1Q9UK58 526 aaPredicted RBP4.43□□□□□ -1.7
LTN1-207ENST00000614971 MBD5Q9P267 1494 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 TNNT1P13805 278 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 PKP1Q13835 747 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 KRT32Q14532 448 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 CCDC152Q4G0S7 254 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 PI16Q6UXB8 463 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 SOS1Q07889 1333 aaPredicted RBP4.43□□□□□ -1.7
LTN1-207ENST00000614971 B4E1Z4 1266 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 IARSP41252 1262 aaKnown RBP4.43□□□□□ -1.7
LTN1-207ENST00000614971 MAP3K11Q16584 847 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 CAGE1Q8TC20 777 aa4.43□□□□□ -1.7
LTN1-207ENST00000614971 TMEM2Q9UHN6 1383 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 CHMLP26374 656 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 NAA16Q6N069 864 aaPredicted RBP4.42□□□□□ -1.7
LTN1-207ENST00000614971 UNC5CLQ8IV45 518 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 ZSWIM4Q9H7M6 989 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 ARMT1Q9H993 441 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 TMOD2Q9NZR1 351 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 TARBP1Q13395 1621 aaKnown RBP4.42□□□□□ -1.7
LTN1-207ENST00000614971 KIAA0232Q92628 1395 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 TTC37Q6PGP7 1564 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 LRRC24Q50LG9 513 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 UTP14AQ9BVJ6 771 aaKnown RBP4.42□□□□□ -1.7
LTN1-207ENST00000614971 USP44Q9H0E7 712 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 RNF216Q9NWF9 866 aaPredicted RBP4.42□□□□□ -1.7
LTN1-207ENST00000614971 PKD2L1Q9P0L9 805 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 CFAP45Q9UL16 551 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 TMEM94Q12767 1356 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 MATR3P43243 847 aaKnown RBP eCLIP4.42□□□□□ -1.75e-9■■□□□ 14.3
LTN1-207ENST00000614971 PUS3Q9BZE2 481 aaKnown RBP4.42□□□□□ -1.7
LTN1-207ENST00000614971 TLR7Q9NYK1 1049 aaKnown RBP4.42□□□□□ -1.7
LTN1-207ENST00000614971 IL16Q14005 1332 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 MBD4O95243 580 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 EIF4A1P60842 406 aaKnown RBP4.42□□□□□ -1.7
LTN1-207ENST00000614971 NOM1Q5C9Z4 860 aaKnown RBP4.42□□□□□ -1.7
LTN1-207ENST00000614971 SMC5Q8IY18 1101 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 C16orf45Q96MC5 204 aaPredicted RBP4.42□□□□□ -1.7
LTN1-207ENST00000614971 SLC52A2Q9HAB3 445 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 SEC63Q9UGP8 760 aaKnown RBP4.42□□□□□ -1.7
LTN1-207ENST00000614971 AXIN2Q9Y2T1 843 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 ARHGEF12Q9NZN5 1544 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 HEATR3Q7Z4Q2 680 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 USP48Q86UV5 1035 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 JMYQ8N9B5 988 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 ATP10AO60312 1499 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 ESPNB1AK53 854 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 PRC1O43663 620 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 MCMDC2Q4G0Z9 681 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 CREB3L3Q68CJ9 461 aa4.42□□□□□ -1.7
LTN1-207ENST00000614971 AATFQ9NY61 560 aaKnown RBP eCLIP4.42□□□□□ -1.7
LTN1-207ENST00000614971 PHKBQ93100 1093 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 ZSCAN31Q96LW9 406 aaPredicted RBP4.41□□□□□ -1.7
LTN1-207ENST00000614971 PDCL3Q9H2J4 239 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 DEF6Q9H4E7 631 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 MAGEC2Q9UBF1 373 aaPredicted RBP4.41□□□□□ -1.7
LTN1-207ENST00000614971 USP21Q9UK80 565 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 PALD1Q9ULE6 856 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 AKNAD1Q5T1N1 836 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 CATIPQ7Z7H3 387 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 GOLGA6L1Q8N7Z2 621 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 CNNM3Q8NE01 707 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 EEF2KMTQ96G04 330 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 GPR101Q96P66 508 aaPredicted RBP4.41□□□□□ -1.7
LTN1-207ENST00000614971 ZC3H12CQ9C0D7 883 aaKnown RBP4.41□□□□□ -1.7
LTN1-207ENST00000614971 DACT1Q9NYF0 836 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 SAMM50Q9Y512 469 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 CCDC194A0A1B0GVG4 234 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 GIGYF1O75420 1035 aaPredicted RBP4.41□□□□□ -1.7
LTN1-207ENST00000614971 TSPY3P0CV98 308 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 TSPY8P0CW00 308 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 ZAP70P43403 619 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 GYG1P46976 350 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 STX17P56962 302 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 FAM193AP78312 1265 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 CTDSPL2Q05D32 466 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 SSRP1Q08945 709 aaKnown RBP4.41□□□□□ -1.7
LTN1-207ENST00000614971 WTAPQ15007 396 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 NCOA7Q8NI08 942 aa4.41□□□□□ -1.7
LTN1-207ENST00000614971 ARHGAP45Q92619 1136 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms