RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 CCDC171Q6TFL3 1326 aa12.98□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 CSB-PGBD3P0DP91 1061 aa12.98□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 AACSQ86V21 672 aa12.98□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.98□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 DDX17Q92841 729 aaKnown RBP12.98□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 SH2B1Q9NRF2 756 aaPredicted RBP12.98□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 LIMCH1Q9UPQ0 1083 aa12.98□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 OS9Q13438 667 aaPredicted RBP12.98□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 MYD88Q99836 296 aa12.98□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 IL2RBP14784 551 aa12.97□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 FOXO4P98177 505 aa12.97□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 DIAPH3Q9NSV4 1193 aa12.97□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 PA2G4Q9UQ80 394 aaKnown RBP12.97□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 CIAO1O76071 339 aa12.97□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 MBD3O95983 291 aa12.97□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 KIAA2012Q0VF49 1180 aa12.97□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 EPHA10Q5JZY3 1008 aa12.97□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 PPP4R3BQ5MIZ7 849 aa12.97□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 HMG20BQ9P0W2 317 aa12.97□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 PALLDQ8WX93 1383 aa12.97□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.97□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 WDR33Q9C0J8 1336 aaKnown RBP12.97□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 CCDC191Q8NCU4 936 aa12.97□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 DDX54Q8TDD1 881 aaKnown RBP12.97□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 PRDM4Q9UKN5 801 aa12.97□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 ZKSCAN5Q9Y2L8 839 aa12.97□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 NBPF26B4DH59 902 aa12.96□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 NBPF14Q5TI25 921 aa12.96□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 NBPF10Q6P3W6 841 aaKnown RBP12.96□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 NBPF15Q8N660 670 aa12.96□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 CABLES1Q8TDN4 633 aa12.96□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 PLA2G12BQ9BX93 195 aa12.96□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 TEX13AQ9BXU3 409 aaPredicted RBP12.96□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.96□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.96□□□□□ -0.331e-9■■■■□ 25
SENP3-EIF4A1-201ENST00000614237 PPP1R9BQ96SB3 815 aa12.96□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 TAOK2Q9UL54 1235 aa12.96□□□□□ -0.33
SENP3-EIF4A1-201ENST00000614237 ZNF831Q5JPB2 1677 aa12.96□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 CHRNA2Q15822 529 aa12.96□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 TNNI3KQ59H18 835 aa12.96□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.96□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 FPGT-TNNI3KV9GXZ4 949 aa12.96□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 VGLL3A8MV65 326 aa12.95□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 NPHP1O15259 732 aa12.95□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 RUFY3Q7L099 469 aa12.95□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 ABCC12Q96J65 1359 aa12.95□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 CWC27Q6UX04 472 aaKnown RBP12.95□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 HAUS7Q99871 368 aa12.95□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 NOL7Q9UMY1 257 aaKnown RBP12.95□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 COL16A1Q07092 1604 aaPredicted RBP12.95□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 MAP4K4O95819 1239 aaPredicted RBP12.95□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 PSMA5P28066 241 aa12.95□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 AIMP1Q12904 312 aaKnown RBP12.95□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 ZBTB9Q96C00 473 aa12.95□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 ISCA1Q9BUE6 129 aa12.95□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.95□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 MYL6BP14649 208 aa12.94□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 PTH1RQ03431 593 aa12.94□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 TRERF1Q96PN7 1200 aa12.94□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 AK2P54819 239 aa12.94□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 SH3TC1Q8TE82 1336 aa12.94□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 DDX60Q8IY21 1712 aaKnown RBP12.94□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 GADD45BO75293 160 aaPredicted RBP12.93□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 AEBP2Q6ZN18 517 aaPredicted RBP12.93□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 ZNF592Q92610 1267 aa12.93□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 PRDM11Q9NQV5 511 aa12.93□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 CCDC39Q9UFE4 941 aa12.93□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 ANKRD1Q15327 319 aa12.93□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 CWC25Q9NXE8 425 aaPredicted RBP12.93□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 ZNF609O15014 1411 aa12.93□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 ZBTB22O15209 634 aa12.93□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 FIBPO43427 364 aa12.93□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 HCLS1P14317 486 aaPredicted RBP12.93□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 SASS6Q6UVJ0 657 aa12.93□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 LRP5O75197 1615 aa12.92□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 NMIQ13287 307 aaPredicted RBP12.92□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 RNF20Q5VTR2 975 aa12.92□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 CREB3L3Q68CJ9 461 aa12.92□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 ZNF771Q7L3S4 317 aaPredicted RBP12.92□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 DBNLQ9UJU6 430 aaKnown RBP12.92□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 CYP46A1Q9Y6A2 500 aa12.92□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 ARAP2Q8WZ64 1704 aa12.92□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 NRAPQ86VF7 1730 aa12.92□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 ZKSCAN1P17029 563 aaPredicted RBP12.92□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 HS1BP3Q53T59 392 aa12.92□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 ATG9AQ7Z3C6 839 aa12.92□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 DRC7Q8IY82 874 aa12.92□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 A0A087WZG4 1122 aa12.92□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 IL15P40933 162 aaPredicted RBP12.92□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 KRT32Q14532 448 aa12.92□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 TOM1L2Q6ZVM7 507 aa12.92□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 TSPY26PQ9H489 355 aa12.92□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 SLC27A2O14975 620 aa12.91□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 FBXL16Q8N461 479 aa12.91□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 TLR7Q9NYK1 1049 aaKnown RBP12.91□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 RBM8AQ9Y5S9 174 aaKnown RBP12.91□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 CDHR2Q9BYE9 1310 aa12.91□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 TAF5LO75529 589 aa12.91□□□□□ -0.34
SENP3-EIF4A1-201ENST00000614237 U2AF2P26368 475 aaKnown RBP eCLIP12.91□□□□□ -0.341e-7■■■□□ 17.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms