RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 SMC4Q9NTJ3 1288 aa33.09■■■□□ 2.89
VEGFA-226ENST00000611736 BBOX1O75936 387 aa33.08■■■□□ 2.89
VEGFA-226ENST00000611736 C1QTNF8P60827 252 aa33.08■■■□□ 2.89
VEGFA-226ENST00000611736 ALDH1L2Q3SY69 923 aa33.08■■■□□ 2.89
VEGFA-226ENST00000611736 BEND3Q5T5X7 828 aa33.08■■■□□ 2.89
VEGFA-226ENST00000611736 SLC4A10Q6U841 1118 aa33.08■■■□□ 2.89
VEGFA-226ENST00000611736 ATP6V0A2Q9Y487 856 aa33.08■■■□□ 2.89
VEGFA-226ENST00000611736 TIAM2Q8IVF5 1701 aa33.08■■■□□ 2.89
VEGFA-226ENST00000611736 DICER1Q9UPY3 1922 aaKnown RBP33.07■■■□□ 2.88
VEGFA-226ENST00000611736 H7C1W4 665 aa33.07■■■□□ 2.88
VEGFA-226ENST00000611736 CCDC85AQ96PX6 553 aaPredicted RBP33.07■■■□□ 2.88
VEGFA-226ENST00000611736 TMX4Q9H1E5 349 aaPredicted RBP33.07■■■□□ 2.88
VEGFA-226ENST00000611736 ZNF277Q9NRM2 450 aaPredicted RBP33.07■■■□□ 2.88
VEGFA-226ENST00000611736 SNED1Q8TER0 1413 aa33.07■■■□□ 2.88
VEGFA-226ENST00000611736 CCDC152Q4G0S7 254 aa33.05■■■□□ 2.88
VEGFA-226ENST00000611736 CELF1Q92879 486 aaKnown RBP33.05■■■□□ 2.88
VEGFA-226ENST00000611736 PTPRCP08575 1304 aa33.04■■■□□ 2.88
VEGFA-226ENST00000611736 MYH3P11055 1940 aa33.04■■■□□ 2.88
VEGFA-226ENST00000611736 COL4A1P02462 1669 aa33.04■■■□□ 2.88
VEGFA-226ENST00000611736 ZC3H4Q9UPT8 1303 aaKnown RBP33.03■■■□□ 2.88
VEGFA-226ENST00000611736 CTSWP56202 376 aa33.03■■■□□ 2.88
VEGFA-226ENST00000611736 PSMD1Q99460 953 aa33.03■■■□□ 2.88
VEGFA-226ENST00000611736 SEC31BQ9NQW1 1179 aa33.03■■■□□ 2.88
VEGFA-226ENST00000611736 ZBED9Q6R2W3 1325 aa33.02■■■□□ 2.88
VEGFA-226ENST00000611736 GRIPAP1Q4V328 841 aa33.02■■■□□ 2.88
VEGFA-226ENST00000611736 SP8Q8IXZ3 490 aa33.02■■■□□ 2.88
VEGFA-226ENST00000611736 CASP7P55210 303 aa33.01■■■□□ 2.87
VEGFA-226ENST00000611736 TMC4Q7Z404 712 aa33■■■□□ 2.87
VEGFA-226ENST00000611736 SRCIN1Q9C0H9 1055 aa33■■■□□ 2.87
VEGFA-226ENST00000611736 IARSP41252 1262 aaKnown RBP32.99■■■□□ 2.87
VEGFA-226ENST00000611736 ALDH1L1O75891 902 aa32.98■■■□□ 2.87
VEGFA-226ENST00000611736 RARSP54136 660 aaKnown RBP32.98■■■□□ 2.87
VEGFA-226ENST00000611736 RPS8P62241 208 aaKnown RBP32.98■■■□□ 2.87
VEGFA-226ENST00000611736 TTLL11Q8NHH1 800 aa32.98■■■□□ 2.87
VEGFA-226ENST00000611736 DPP8Q6V1X1 898 aaPredicted RBP32.97■■■□□ 2.87
VEGFA-226ENST00000611736 PLA2G12BQ9BX93 195 aa32.97■■■□□ 2.87
VEGFA-226ENST00000611736 KDM2BQ8NHM5 1336 aa32.97■■■□□ 2.87
VEGFA-226ENST00000611736 MPNDQ8N594 471 aa32.96■■■□□ 2.87
VEGFA-226ENST00000611736 GREM2Q9H772 168 aa32.96■■■□□ 2.87
VEGFA-226ENST00000611736 LRRC37AA6NMS7 1700 aa32.95■■■□□ 2.87
VEGFA-226ENST00000611736 GRM8O00222 908 aa32.95■■■□□ 2.87
VEGFA-226ENST00000611736 NMRK2Q9NPI5 230 aa32.95■■■□□ 2.87
VEGFA-226ENST00000611736 C9orf78Q9NZ63 289 aaPredicted RBP32.95■■■□□ 2.87
VEGFA-226ENST00000611736 NOB1Q9ULX3 412 aaKnown RBP32.95■■■□□ 2.87
VEGFA-226ENST00000611736 GLTPD2A6NH11 291 aa32.93■■■□□ 2.86
VEGFA-226ENST00000611736 ANKRD18AQ8IVF6 992 aa32.92■■■□□ 2.86
VEGFA-226ENST00000611736 BRPF1P55201 1214 aaPredicted RBP32.91■■■□□ 2.86
VEGFA-226ENST00000611736 LARGE2Q8N3Y3 721 aa32.91■■■□□ 2.86
VEGFA-226ENST00000611736 SUPT20HQ8NEM7 779 aa32.91■■■□□ 2.86
VEGFA-226ENST00000611736 CDC5LQ99459 802 aaKnown RBP32.91■■■□□ 2.86
VEGFA-226ENST00000611736 RTFDC1Q9BY42 306 aaPredicted RBP32.91■■■□□ 2.86
VEGFA-226ENST00000611736 RTL9Q8NET4 1388 aa32.91■■■□□ 2.86
VEGFA-226ENST00000611736 PPIP5K2O43314 1243 aa32.9■■■□□ 2.86
VEGFA-226ENST00000611736 FAM161AQ3B820 660 aa32.9■■■□□ 2.86
VEGFA-226ENST00000611736 DPY19L2Q6NUT2 758 aa32.9■■■□□ 2.86
VEGFA-226ENST00000611736 JDP2Q8WYK2 163 aa32.9■■■□□ 2.86
VEGFA-226ENST00000611736 NSFL1CQ9UNZ2 370 aaKnown RBP32.9■■■□□ 2.86
VEGFA-226ENST00000611736 COL4A5P29400 1685 aa32.9■■■□□ 2.86
VEGFA-226ENST00000611736 SPEF2Q9C093 1822 aa32.89■■■□□ 2.86
VEGFA-226ENST00000611736 KIF3CO14782 793 aa32.89■■■□□ 2.86
VEGFA-226ENST00000611736 GPSM2P81274 684 aa32.89■■■□□ 2.86
VEGFA-226ENST00000611736 AOC3Q16853 763 aa32.89■■■□□ 2.86
VEGFA-226ENST00000611736 CSF1RP07333 972 aa32.88■■■□□ 2.85
VEGFA-226ENST00000611736 RRAGCQ9HB90 399 aa32.88■■■□□ 2.85
VEGFA-226ENST00000611736 DUOX1Q9NRD9 1551 aa32.87■■■□□ 2.85
VEGFA-226ENST00000611736 KIF16BQ96L93 1317 aa32.87■■■□□ 2.85
VEGFA-226ENST00000611736 ZNF541Q9H0D2 1346 aa32.87■■■□□ 2.85
VEGFA-226ENST00000611736 FOXO4P98177 505 aa32.87■■■□□ 2.85
VEGFA-226ENST00000611736 API5Q9BZZ5 524 aaKnown RBP32.87■■■□□ 2.85
VEGFA-226ENST00000611736 CHMP3Q9Y3E7 222 aa32.87■■■□□ 2.85
VEGFA-226ENST00000611736 NBPF7P0C2Y1 421 aaPredicted RBP32.86■■■□□ 2.85
VEGFA-226ENST00000611736 ITGA6P23229 1130 aa32.86■■■□□ 2.85
VEGFA-226ENST00000611736 EPHA10Q5JZY3 1008 aa32.86■■■□□ 2.85
VEGFA-226ENST00000611736 BCAR3O75815 825 aa32.85■■■□□ 2.85
VEGFA-226ENST00000611736 DDNO94850 711 aaPredicted RBP32.85■■■□□ 2.85
VEGFA-226ENST00000611736 NIM1KQ8IY84 436 aa32.85■■■□□ 2.85
VEGFA-226ENST00000611736 C6orf229H3BNL8 230 aa32.84■■■□□ 2.85
VEGFA-226ENST00000611736 FZD9O00144 591 aa32.84■■■□□ 2.85
VEGFA-226ENST00000611736 SUCLG2Q96I99 432 aa32.84■■■□□ 2.85
VEGFA-226ENST00000611736 VPS33BQ9H267 617 aa32.84■■■□□ 2.85
VEGFA-226ENST00000611736 ANKIB1Q9P2G1 1089 aa32.84■■■□□ 2.85
VEGFA-226ENST00000611736 LMBR1LQ6UX01 489 aa32.83■■■□□ 2.85
VEGFA-226ENST00000611736 POLLQ9UGP5 575 aa32.83■■■□□ 2.85
VEGFA-226ENST00000611736 LTBP1Q14766 1721 aa32.82■■■□□ 2.85
VEGFA-226ENST00000611736 UTYO14607 1347 aa32.82■■■□□ 2.84
VEGFA-226ENST00000611736 IGHMBP2P38935 993 aaKnown RBP32.82■■■□□ 2.84
VEGFA-226ENST00000611736 KIAA2012Q0VF49 1180 aa32.82■■■□□ 2.84
VEGFA-226ENST00000611736 BSDC1Q9NW68 430 aaPredicted RBP32.82■■■□□ 2.84
VEGFA-226ENST00000611736 ANKRD18BA2A2Z9 1011 aa32.81■■■□□ 2.84
VEGFA-226ENST00000611736 CCT4P50991 539 aaKnown RBP32.81■■■□□ 2.84
VEGFA-226ENST00000611736 GPR101Q96P66 508 aaPredicted RBP32.81■■■□□ 2.84
VEGFA-226ENST00000611736 WDR90Q96KV7 1748 aa32.8■■■□□ 2.84
VEGFA-226ENST00000611736 EIF6P56537 245 aaKnown RBP32.8■■■□□ 2.84
VEGFA-226ENST00000611736 IFIT5Q13325 482 aaKnown RBP32.8■■■□□ 2.84
VEGFA-226ENST00000611736 TBC1D16Q8TBP0 767 aa32.8■■■□□ 2.84
VEGFA-226ENST00000611736 FRAT1Q92837 279 aaPredicted RBP32.8■■■□□ 2.84
VEGFA-226ENST00000611736 PODXL2Q9NZ53 605 aa32.8■■■□□ 2.84
VEGFA-226ENST00000611736 UFL1O94874 794 aa32.79■■■□□ 2.84
VEGFA-226ENST00000611736 WASHC4Q2M389 1173 aa32.79■■■□□ 2.84
VEGFA-226ENST00000611736 C16orf71Q8IYS4 520 aaPredicted RBP32.79■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms